Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750496

Identifier: 86750496

GI number: 86750496

Start: 3870352

End: 3870861

Strand: Reverse

Name: 86750496

Synonym: RPB_3385

Alternate gene names: NA

Gene position: 3870861-3870352 (Counterclockwise)

Preceding gene: 86750497

Following gene: 86750495

Centisome position: 72.6

GC content: 62.16

Gene sequence:

>510_bases
ATGAAGTATCTGTCGAAAGCCCTGCCGGCCGTCGTGCTGGCGCTCGGCCTGGCGTTGTCGGTCGGCCATGCGCAGGCCCA
GACCAAGCCGCCGTCGCCGGCGGCGATCGCCGCCGCCAAGGAGATCCTGGAGCTGAAACGCGCCAACACGATCTACGCCA
ATGCGGTGCCGAACATCGTCCAGCGCACCATGGACACCTTGATGCAGACCAATCTGAACTATCAGCAGGATCTCAAGGAA
GTCGCCATGGTGGTCGCCAAGACCATGGCCGGCCGCGAGAAGGAAATCGGCGACGGCATGGCGAAGATCTATGCCCAGGA
CTTCACCGAGCAGGAGCTGAAGGATCTGGTGGTGTTCTACAAGACGCCGCTCGGCCAGAAGCTGCTGAACGAAGAGCCGA
AGGCGATCCAGCAGAGCATGGCCTACATGAATCAGTGGGCGCAGACCTTCGCCGAAGAGGTCAACGGCCAGTTCCGTGCC
GAGATGCGCAAGCGCGGCAAGGCGATCTGA

Upstream 100 bases:

>100_bases
ATGGGTTGTTCATCGGGATCGCCAGCACGGTCGTGCTCGCGGGGACCGACGGAATTCGAACTGTCGAACGGGCGTAGCGC
CACATCCTGGAGAATCGGAA

Downstream 100 bases:

>100_bases
CCGGCCTTATCTCGTCATTGCGAGCCAACGGGTCCGGCCTTCGGCCGGCCCGATGACAGGCTCCGCGAAGCAATCCAGCC
CCACGACGTGACGCTGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKYLSKALPAVVLALGLALSVGHAQAQTKPPSPAAIAAAKEILELKRANTIYANAVPNIVQRTMDTLMQTNLNYQQDLKE
VAMVVAKTMAGREKEIGDGMAKIYAQDFTEQELKDLVVFYKTPLGQKLLNEEPKAIQQSMAYMNQWAQTFAEEVNGQFRA
EMRKRGKAI

Sequences:

>Translated_169_residues
MKYLSKALPAVVLALGLALSVGHAQAQTKPPSPAAIAAAKEILELKRANTIYANAVPNIVQRTMDTLMQTNLNYQQDLKE
VAMVVAKTMAGREKEIGDGMAKIYAQDFTEQELKDLVVFYKTPLGQKLLNEEPKAIQQSMAYMNQWAQTFAEEVNGQFRA
EMRKRGKAI
>Mature_169_residues
MKYLSKALPAVVLALGLALSVGHAQAQTKPPSPAAIAAAKEILELKRANTIYANAVPNIVQRTMDTLMQTNLNYQQDLKE
VAMVVAKTMAGREKEIGDGMAKIYAQDFTEQELKDLVVFYKTPLGQKLLNEEPKAIQQSMAYMNQWAQTFAEEVNGQFRA
EMRKRGKAI

Specific function: Unknown

COG id: COG3184

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18759; Mature: 18759

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLSKALPAVVLALGLALSVGHAQAQTKPPSPAAIAAAKEILELKRANTIYANAVPNIV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QRTMDTLMQTNLNYQQDLKEVAMVVAKTMAGREKEIGDGMAKIYAQDFTEQELKDLVVFY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTPLGQKLLNEEPKAIQQSMAYMNQWAQTFAEEVNGQFRAEMRKRGKAI
HCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKYLSKALPAVVLALGLALSVGHAQAQTKPPSPAAIAAAKEILELKRANTIYANAVPNIV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QRTMDTLMQTNLNYQQDLKEVAMVVAKTMAGREKEIGDGMAKIYAQDFTEQELKDLVVFY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTPLGQKLLNEEPKAIQQSMAYMNQWAQTFAEEVNGQFRAEMRKRGKAI
HCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA