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The map label for this gene is 86750476

Identifier: 86750476

GI number: 86750476

Start: 3847630

End: 3848349

Strand: Reverse

Name: 86750476

Synonym: RPB_3365

Alternate gene names: NA

Gene position: 3848349-3847630 (Counterclockwise)

Preceding gene: 86750477

Following gene: 86750475

Centisome position: 72.18

GC content: 69.44

Gene sequence:

>720_bases
GTGTCCCAATCCGAAACCGGACTGCTGCCCGCAGCCGTGCTCGAAGCGCTGGCGCGCTACGACACCCCGACGATCTGCAA
CGCGATGGAGATCGTCGCGCCGGAGCGCCGCGCGATCGGCTTCACGACGCGCCCGCTGATCTGTCCGTTTCCGCAATTGC
CGCCGATCGTCGGCTATGCGCGCACCGCGACCATTCGCGCCACGGTCGCTTCGGGACTGCCCGCGACCGAGCAGCAGGCG
CGGCGGATGGCGTACTACGAATATGTCGGCTCCGGGCAGGGGCCGCGTATCAGCGTGATCCAGGACATCGATGGACCCGA
CGCCGGATTCGGCGCGTTCTGGGGCGAGGTCAACAGCGCCGTGCATCAGGCGCTGGGATGCCTCGGCGTGATCACCGACG
GCTCGATTCGCGACATCCCGCAATGGGCGCCGGGCTTCCAAGCGCTCGCCGGTTCGATCGCTCCGTCGCACGGCCACGTC
CATGTCACCGGCTTCGCCGCGGAGATCCGCGTCGCCGGGATGACGGTGCGCGACGGCGACCTGATCCACGCCGACAGCCA
CGGCGCGATCGTGATTCCGCATCACCTCGCGGACAAGCTGCCGGCGGCGGCCGACCTCTGCGGGCGGCGCGAGGTGCCGA
TCCTCGCGATCGCCCGCGATCCGTCGTTTTCGCTGCAGCGGCTACGCGAGGCGCTGATCCGCTCCGGGGAGATTCACTGA

Upstream 100 bases:

>100_bases
TCTTGGGCGCGCGCGCCGATTTCGCTATAGGCATGAGCGTTCGCCGCTGTGAACGGCCTCCGCGACGAGATGGCCGATGT
GGCGACGCTGGAGGAAACCC

Downstream 100 bases:

>100_bases
GTCCCAGTGTCCTGAATGGTTATCAGGAGGTTGACGTCGCGCGCGACGGCTCGTCCAACGGTAAGTGGACATCGTTCGCC
GCAACGCGCTCCGACGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSQSETGLLPAAVLEALARYDTPTICNAMEIVAPERRAIGFTTRPLICPFPQLPPIVGYARTATIRATVASGLPATEQQA
RRMAYYEYVGSGQGPRISVIQDIDGPDAGFGAFWGEVNSAVHQALGCLGVITDGSIRDIPQWAPGFQALAGSIAPSHGHV
HVTGFAAEIRVAGMTVRDGDLIHADSHGAIVIPHHLADKLPAAADLCGRREVPILAIARDPSFSLQRLREALIRSGEIH

Sequences:

>Translated_239_residues
MSQSETGLLPAAVLEALARYDTPTICNAMEIVAPERRAIGFTTRPLICPFPQLPPIVGYARTATIRATVASGLPATEQQA
RRMAYYEYVGSGQGPRISVIQDIDGPDAGFGAFWGEVNSAVHQALGCLGVITDGSIRDIPQWAPGFQALAGSIAPSHGHV
HVTGFAAEIRVAGMTVRDGDLIHADSHGAIVIPHHLADKLPAAADLCGRREVPILAIARDPSFSLQRLREALIRSGEIH
>Mature_238_residues
SQSETGLLPAAVLEALARYDTPTICNAMEIVAPERRAIGFTTRPLICPFPQLPPIVGYARTATIRATVASGLPATEQQAR
RMAYYEYVGSGQGPRISVIQDIDGPDAGFGAFWGEVNSAVHQALGCLGVITDGSIRDIPQWAPGFQALAGSIAPSHGHVH
VTGFAAEIRVAGMTVRDGDLIHADSHGAIVIPHHLADKLPAAADLCGRREVPILAIARDPSFSLQRLREALIRSGEIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25381; Mature: 25250

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSETGLLPAAVLEALARYDTPTICNAMEIVAPERRAIGFTTRPLICPFPQLPPIVGYA
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RTATIRATVASGLPATEQQARRMAYYEYVGSGQGPRISVIQDIDGPDAGFGAFWGEVNSA
HHEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
VHQALGCLGVITDGSIRDIPQWAPGFQALAGSIAPSHGHVHVTGFAAEIRVAGMTVRDGD
HHHHHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEEECCC
LIHADSHGAIVIPHHLADKLPAAADLCGRREVPILAIARDPSFSLQRLREALIRSGEIH
EEEECCCCEEEECHHHHHHCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQSETGLLPAAVLEALARYDTPTICNAMEIVAPERRAIGFTTRPLICPFPQLPPIVGYA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RTATIRATVASGLPATEQQARRMAYYEYVGSGQGPRISVIQDIDGPDAGFGAFWGEVNSA
HHEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
VHQALGCLGVITDGSIRDIPQWAPGFQALAGSIAPSHGHVHVTGFAAEIRVAGMTVRDGD
HHHHHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEEECCC
LIHADSHGAIVIPHHLADKLPAAADLCGRREVPILAIARDPSFSLQRLREALIRSGEIH
EEEECCCCEEEECHHHHHHCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA