Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is chqB [H]

Identifier: 86750366

GI number: 86750366

Start: 3721785

End: 3722690

Strand: Reverse

Name: chqB [H]

Synonym: RPB_3255

Alternate gene names: 86750366

Gene position: 3722690-3721785 (Counterclockwise)

Preceding gene: 86750368

Following gene: 86750365

Centisome position: 69.82

GC content: 64.46

Gene sequence:

>906_bases
ATGCCACAATTCGACGAAACCGAGCTGACCGAAGCCGTCGTCGCGAGCTTCGACGATACGCCTGATCCGCGGCTCAAGCA
TCTGATGCGCGAACTGGTCCGTTCGCTGCACGACTATGTCCGCCGCACCGGCCTGACCTTCGAGGAGTGGCAGAAAACGA
TCGATTTCCTCACCCGTACCGGGCAGAAATGCACCCCGAGCCGGCAGGAGTTCATCCTGCTGTCGGACGTGCTCGGCGTC
TCGATGCTGGTCGATGCGGTCAACCATCGCGAGCGCGGCGGCGCCACGGAGACCACGGTGCTGGGGCCGTTCTACGTCGG
CGAGCACAAACCGATGCCGCATGGCGCCGATATTGCCGAAGGTGTCGAGGGCGAGCGGATGTATGTCCAGAGCCGTGTCA
CCGATCTTTCCGGCAATCCGTTGGCCGGCGTGCCGGTCGACGTCTGGCACGCCGATGACGACGGCTTCTATGATTCGCAG
AAACAGTCCTACGCCGAGGAGGGCCCGTCATTGCGCGCGCGGTTCGTCACCGACGGCGACGGGCGGATCGCGTTCCGCAC
CATCCTGCCGTGCAGCTATCCGATCCCGATCGACGGTCCGGTCGGCGAACTGATCCTCGCCTCGCAGCGGCATCCGATGC
GGCCGGCGCACGTGCATTTTCTGGTCGATGCGCCGGGCTACGAGCCGCTGATCACGCATGTGTTCATCGAGGGCGACAAA
TATCTCGAGTCCGACGCGGTGTTCGGCGTCAAGGACGACCTGATTTCGACCATTGAATTGCGCGATGATGCGGTGATGCC
GGATGGCCGCGCGGCGTCGGGGCCGTGGCATTTGATGACCTATGAGTTCCGGCTGAAGCCGGGCAGGGGCGCGGCGCCGA
AGCCGATGATGGCGGCGGCGGAGTGA

Upstream 100 bases:

>100_bases
CCCCGGCAAGGAGGGGCCGCGCAGGCCGGTCTGCAAGCGCAGCGCTTATCACATGGGAATGCCTGATGTAGCTTTCGCCG
TCGCCAACCGGGATTGGAAT

Downstream 100 bases:

>100_bases
CAACAGGAGCTCGCATTGAGTGGGGACACGCGCAAATTCGGCCGGGGCGGGCCGGAGATTGCGCCGATCGGACAGGGCAC
CTGGTACATCGACCGGGGTG

Product: intradiol ring-cleavage dioxygenase

Products: NA

Alternate protein names: 1,2-HQD [H]

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRTGQKCTPSRQEFILLSDVLGV
SMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAEGVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQ
KQSYAEEGPSLRARFVTDGDGRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK
YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAAE

Sequences:

>Translated_301_residues
MPQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRTGQKCTPSRQEFILLSDVLGV
SMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAEGVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQ
KQSYAEEGPSLRARFVTDGDGRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK
YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAAE
>Mature_300_residues
PQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRTGQKCTPSRQEFILLSDVLGVS
MLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAEGVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQK
QSYAEEGPSLRARFVTDGDGRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDKY
LESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAAE

Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007535
- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]

EC number: =1.13.11.37 [H]

Molecular weight: Translated: 33492; Mature: 33361

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRT
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GQKCTPSRQEFILLSDVLGVSMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAE
CCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCCCCCCHHHC
GVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQKQSYAEEGPSLRARFVTDGD
CCCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCC
GRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK
CCEEEEEECCCCCCCCCCCCHHHHEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC
YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAA
EECCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
E
C
>Mature Secondary Structure 
PQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRT
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GQKCTPSRQEFILLSDVLGVSMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAE
CCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCCCCCCHHHC
GVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQKQSYAEEGPSLRARFVTDGD
CCCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCC
GRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK
CCEEEEEECCCCCCCCCCCCHHHHEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC
YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAA
EECCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141483 [H]