| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yeaE [H]
Identifier: 86750365
GI number: 86750365
Start: 3720924
End: 3721769
Strand: Reverse
Name: yeaE [H]
Synonym: RPB_3254
Alternate gene names: 86750365
Gene position: 3721769-3720924 (Counterclockwise)
Preceding gene: 86750366
Following gene: 86750364
Centisome position: 69.81
GC content: 69.03
Gene sequence:
>846_bases TTGAGTGGGGACACGCGCAAATTCGGCCGGGGCGGGCCGGAGATTGCGCCGATCGGACAGGGCACCTGGTACATCGACCG GGGTGACCGGACGGCGGCGATCGCCGCGCTGCGGCGCGGCCTCGACCTCGGCATGACGCATATCGACACCGCCGAGATGT ACGGCGATGCCGAGCCGCTGGTGGCGGAGGCCATCGACGGCCGGCGGGACCAGGTGTTCCTGGTCTCGAAGGTGCTGCCG AGCAATGCCTCGCGGCGCGGCACCGTCGCCGCTTGCGAGCGCTCGCTGAAGCGGCTGAAGACCGACCGGCTCGACTGCTA TCTGCTGCATTGGCGCGGGCAATATCGGCTGGCGGAAACCGTGGCGGCGTTCGAGGAACTGGTCGCCGCCGGCAAGATCC GGTCATGGGGCGTCAGCAATTTCGACGTCGGCGATCTGTGGGAACTGCTCAAGGTCGCGGGGCCGGACAGGATCGCCTGC AATCAGGTGCTGTATCATCTGCGCGAGCGCGCGATCGAGCATGCGGTGATCCCGTGGTGCGAGGCGCACGGCGTTGCGGT CACCGCCTATTCACCATTCGGTCATGACGAGTTTCCCCTGCCGCGCAGCACGGAGGGGCGGCTGCTGCAGTCGATCGCCG AGGCCCATGGCGCCACGCCACGGCAGGTGGCGCTGGCGTTTCTGACCCGGCGGCCGTCATTGTTCGCGATCCCGAAGGCT GCCGACCCGGCGCATGCGGCCGACAATGCCGCGGCCGGATCGCTGCGGCTCTCCGATGACGAGATCGCGGCGATCGACCA GGCCTGTCCGCTCGGGCCCGAACCGGCCAGCCTGCCGATGCTGTGA
Upstream 100 bases:
>100_bases GCCGTGGCATTTGATGACCTATGAGTTCCGGCTGAAGCCGGGCAGGGGCGCGGCGCCGAAGCCGATGATGGCGGCGGCGG AGTGACAACAGGAGCTCGCA
Downstream 100 bases:
>100_bases GCGAGGCCGGGGCCGGCGCAGCCCGCCGCCGAGTCGCCGCGTGCATAGCCGCGTCCTGATTTCCGCGCTTGCGCGGCGGC TACGAACATCGTTTTGTCGG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSGDTRKFGRGGPEIAPIGQGTWYIDRGDRTAAIAALRRGLDLGMTHIDTAEMYGDAEPLVAEAIDGRRDQVFLVSKVLP SNASRRGTVAACERSLKRLKTDRLDCYLLHWRGQYRLAETVAAFEELVAAGKIRSWGVSNFDVGDLWELLKVAGPDRIAC NQVLYHLRERAIEHAVIPWCEAHGVAVTAYSPFGHDEFPLPRSTEGRLLQSIAEAHGATPRQVALAFLTRRPSLFAIPKA ADPAHAADNAAAGSLRLSDDEIAAIDQACPLGPEPASLPML
Sequences:
>Translated_281_residues MSGDTRKFGRGGPEIAPIGQGTWYIDRGDRTAAIAALRRGLDLGMTHIDTAEMYGDAEPLVAEAIDGRRDQVFLVSKVLP SNASRRGTVAACERSLKRLKTDRLDCYLLHWRGQYRLAETVAAFEELVAAGKIRSWGVSNFDVGDLWELLKVAGPDRIAC NQVLYHLRERAIEHAVIPWCEAHGVAVTAYSPFGHDEFPLPRSTEGRLLQSIAEAHGATPRQVALAFLTRRPSLFAIPKA ADPAHAADNAAAGSLRLSDDEIAAIDQACPLGPEPASLPML >Mature_280_residues SGDTRKFGRGGPEIAPIGQGTWYIDRGDRTAAIAALRRGLDLGMTHIDTAEMYGDAEPLVAEAIDGRRDQVFLVSKVLPS NASRRGTVAACERSLKRLKTDRLDCYLLHWRGQYRLAETVAAFEELVAAGKIRSWGVSNFDVGDLWELLKVAGPDRIACN QVLYHLRERAIEHAVIPWCEAHGVAVTAYSPFGHDEFPLPRSTEGRLLQSIAEAHGATPRQVALAFLTRRPSLFAIPKAA DPAHAADNAAAGSLRLSDDEIAAIDQACPLGPEPASLPML
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223468663, Length=281, Percent_Identity=31.6725978647687, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI291291012, Length=263, Percent_Identity=31.9391634980989, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI24497577, Length=288, Percent_Identity=29.5138888888889, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI5174391, Length=288, Percent_Identity=29.5138888888889, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI4502049, Length=294, Percent_Identity=28.9115646258503, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI310109922, Length=265, Percent_Identity=30.188679245283, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI45446745, Length=285, Percent_Identity=28.4210526315789, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI4503285, Length=285, Percent_Identity=28.4210526315789, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI310109920, Length=285, Percent_Identity=28.4210526315789, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI5453543, Length=285, Percent_Identity=28.0701754385965, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI5174695, Length=290, Percent_Identity=26.2068965517241, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI24497585, Length=282, Percent_Identity=24.113475177305, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI300116273, Length=273, Percent_Identity=26.7399267399267, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI24497583, Length=283, Percent_Identity=24.7349823321555, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1788081, Length=275, Percent_Identity=46.5454545454545, Blast_Score=243, Evalue=1e-65, Organism=Escherichia coli, GI87082198, Length=279, Percent_Identity=28.673835125448, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1786400, Length=261, Percent_Identity=27.9693486590038, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787674, Length=285, Percent_Identity=30.5263157894737, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1788070, Length=309, Percent_Identity=27.1844660194175, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI87081735, Length=279, Percent_Identity=28.673835125448, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI48994888, Length=172, Percent_Identity=31.9767441860465, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17552492, Length=263, Percent_Identity=28.1368821292776, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17537077, Length=292, Percent_Identity=28.7671232876712, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17537075, Length=290, Percent_Identity=29.3103448275862, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17566692, Length=289, Percent_Identity=25.9515570934256, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17564128, Length=292, Percent_Identity=27.7397260273973, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17537079, Length=293, Percent_Identity=26.6211604095563, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17538386, Length=279, Percent_Identity=28.673835125448, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17561300, Length=266, Percent_Identity=27.8195488721804, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17550248, Length=288, Percent_Identity=23.2638888888889, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320576, Length=277, Percent_Identity=27.7978339350181, Blast_Score=96, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6324694, Length=282, Percent_Identity=28.0141843971631, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320079, Length=288, Percent_Identity=28.4722222222222, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI45553081, Length=289, Percent_Identity=29.4117647058824, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24644950, Length=295, Percent_Identity=28.4745762711864, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI281366140, Length=256, Percent_Identity=30.078125, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24657054, Length=301, Percent_Identity=26.9102990033223, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI24662789, Length=295, Percent_Identity=28.135593220339, Blast_Score=94, Evalue=8e-20, Organism=Drosophila melanogaster, GI24663317, Length=295, Percent_Identity=24.7457627118644, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI20129731, Length=289, Percent_Identity=27.681660899654, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356425, Length=290, Percent_Identity=25.5172413793103, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24662781, Length=294, Percent_Identity=27.2108843537415, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24662785, Length=279, Percent_Identity=27.5985663082437, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30514; Mature: 30383
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDTRKFGRGGPEIAPIGQGTWYIDRGDRTAAIAALRRGLDLGMTHIDTAEMYGDAEPL CCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHCHHCCCHHCCHHHHHCCCCHH VAEAIDGRRDQVFLVSKVLPSNASRRGTVAACERSLKRLKTDRLDCYLLHWRGQYRLAET HHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH VAAFEELVAAGKIRSWGVSNFDVGDLWELLKVAGPDRIACNQVLYHLRERAIEHAVIPWC HHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC EAHGVAVTAYSPFGHDEFPLPRSTEGRLLQSIAEAHGATPRQVALAFLTRRPSLFAIPKA CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCC ADPAHAADNAAAGSLRLSDDEIAAIDQACPLGPEPASLPML CCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SGDTRKFGRGGPEIAPIGQGTWYIDRGDRTAAIAALRRGLDLGMTHIDTAEMYGDAEPL CCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHCHHCCCHHCCHHHHHCCCCHH VAEAIDGRRDQVFLVSKVLPSNASRRGTVAACERSLKRLKTDRLDCYLLHWRGQYRLAET HHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH VAAFEELVAAGKIRSWGVSNFDVGDLWELLKVAGPDRIACNQVLYHLRERAIEHAVIPWC HHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC EAHGVAVTAYSPFGHDEFPLPRSTEGRLLQSIAEAHGATPRQVALAFLTRRPSLFAIPKA CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCC ADPAHAADNAAAGSLRLSDDEIAAIDQACPLGPEPASLPML CCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]