Click here to switch to the map view.

The map label for this gene is 86750310

Identifier: 86750310

GI number: 86750310

Start: 3659479

End: 3660696

Strand: Reverse

Name: 86750310

Synonym: RPB_3199

Alternate gene names: NA

Gene position: 3660696-3659479 (Counterclockwise)

Preceding gene: 86750311

Following gene: 86750308

Centisome position: 68.66

GC content: 63.05

Gene sequence:

>1218_bases
ATGCACTTCATTCAACGTGCGGCGGCGGCGATGACGCTGGCTACGCCGCTGCTGCTCGGCGCCTCTGCGTTCGCGCAGCA
ACAGAGCCCGCTGAAGATCGGTCTGCTCGGGGATTTCCAGTCGGTGTATTCCGACATCGGCGGCCCCGGCAATGTCGAGG
CCGCCAAGATGGCGATCGAGGAGATGGGCGGCACGATGTTCGGCAAGCCGATCGAGTTCATCTCGGCCGACGTCCAGAAC
AAGCCCGACATCGCCGCGTCGTTGGCGCGCAAATGGTACGAGAACGAAGGCGTCGACATGATCGTCGATTTGCCGACCTC
GGCCACCGCGCTCGCCGCGATGGAAATGTCGAAGCGGTTCGAGAAGATCATGATCGTCACCGACGCGGCGTCGTCGGACA
TCACCGGCAAGTCGTGCTCGCCCTACACCGCGCACTGGACCTACGACACTTACTCCAACGCACACACCGTGGGCTCGGCG
ATCGTCAAGAACGGCGGCGACACCTGGTTCTTCATCACCGCGGACTATCTGTTCGGCCATTCGGTCGAGCGCGACACCGG
CGAGGTGGTCAAGGCGGCCGGCGGCAAGGTGCTCGGCAGCACGCGGCACCCGTTGAACAACGCCGACTTCTCGTCGTTCC
TGCTGCAGGCGCAGTCGTCCAAGGCCAAGATCATCGGCATGGCCAATGGCGGCGGCGACACCATTAACACCATCAAGCAG
GCGGCGGAATTCGGCATCGTCGCCGGCGGCCAGAAGCTCGCCGGCATCGTGATGTTCATCTCCGACATCCACAGCCTCGG
GCTGAAGATGGCGAACGGGCTGATCATCACCGAGGCGTATTACTGGGACCTCAACGACCGAACCCGCGAATTCGGCAAGA
AGTTCCACGACAGGATGAAGCGGATGCCGACGATGAACCAGGCCGCGACCTACAGCGCGACGCTGCATTATCTCAAGGCG
GTGAAGGCGGCGAATTCCAAGGACACCAAGACGGTGCTGGCGAAGATGCGCGAGACGCCGGTGCGCGACGCCTTCACCGA
CAACGGCTTCCTGCGCGAGGACGGCCGCATGGTGCACTCGATGTTCCTGTTCGAGGTCAAGAAGCCGGAAGAATCCAAGG
CGCCGTGGGACTATTACAAGATGCTGGCCGAAGTCCCCGGCGATCAGGCGTTCCGTCCGCTGAAGGACGGCGGCTGCCCG
CTGGTGAAGGCGGAGTAA

Upstream 100 bases:

>100_bases
AGAAACTCTCGTACAGACAGGAGGGCGGGCACACACCACAGATGCGCGGGGCCGGCGACAAGGCCGAATGAACAAATCAA
AAAACTCTTCCGGAGGAAAC

Downstream 100 bases:

>100_bases
GCGCATCTGCGGGTGCCGTGAGTCGACGACCCCGCAACCAACAAACGTCATCGCCGGGCTCGACCCGGCGATCCATCTTC
TTCGCAAAGAGTCGTTGTTG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein; ABC Transporter Subunit

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MHFIQRAAAAMTLATPLLLGASAFAQQQSPLKIGLLGDFQSVYSDIGGPGNVEAAKMAIEEMGGTMFGKPIEFISADVQN
KPDIAASLARKWYENEGVDMIVDLPTSATALAAMEMSKRFEKIMIVTDAASSDITGKSCSPYTAHWTYDTYSNAHTVGSA
IVKNGGDTWFFITADYLFGHSVERDTGEVVKAAGGKVLGSTRHPLNNADFSSFLLQAQSSKAKIIGMANGGGDTINTIKQ
AAEFGIVAGGQKLAGIVMFISDIHSLGLKMANGLIITEAYYWDLNDRTREFGKKFHDRMKRMPTMNQAATYSATLHYLKA
VKAANSKDTKTVLAKMRETPVRDAFTDNGFLREDGRMVHSMFLFEVKKPEESKAPWDYYKMLAEVPGDQAFRPLKDGGCP
LVKAE

Sequences:

>Translated_405_residues
MHFIQRAAAAMTLATPLLLGASAFAQQQSPLKIGLLGDFQSVYSDIGGPGNVEAAKMAIEEMGGTMFGKPIEFISADVQN
KPDIAASLARKWYENEGVDMIVDLPTSATALAAMEMSKRFEKIMIVTDAASSDITGKSCSPYTAHWTYDTYSNAHTVGSA
IVKNGGDTWFFITADYLFGHSVERDTGEVVKAAGGKVLGSTRHPLNNADFSSFLLQAQSSKAKIIGMANGGGDTINTIKQ
AAEFGIVAGGQKLAGIVMFISDIHSLGLKMANGLIITEAYYWDLNDRTREFGKKFHDRMKRMPTMNQAATYSATLHYLKA
VKAANSKDTKTVLAKMRETPVRDAFTDNGFLREDGRMVHSMFLFEVKKPEESKAPWDYYKMLAEVPGDQAFRPLKDGGCP
LVKAE
>Mature_405_residues
MHFIQRAAAAMTLATPLLLGASAFAQQQSPLKIGLLGDFQSVYSDIGGPGNVEAAKMAIEEMGGTMFGKPIEFISADVQN
KPDIAASLARKWYENEGVDMIVDLPTSATALAAMEMSKRFEKIMIVTDAASSDITGKSCSPYTAHWTYDTYSNAHTVGSA
IVKNGGDTWFFITADYLFGHSVERDTGEVVKAAGGKVLGSTRHPLNNADFSSFLLQAQSSKAKIIGMANGGGDTINTIKQ
AAEFGIVAGGQKLAGIVMFISDIHSLGLKMANGLIITEAYYWDLNDRTREFGKKFHDRMKRMPTMNQAATYSATLHYLKA
VKAANSKDTKTVLAKMRETPVRDAFTDNGFLREDGRMVHSMFLFEVKKPEESKAPWDYYKMLAEVPGDQAFRPLKDGGCP
LVKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44093; Mature: 44093

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFIQRAAAAMTLATPLLLGASAFAQQQSPLKIGLLGDFQSVYSDIGGPGNVEAAKMAIE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHH
EMGGTMFGKPIEFISADVQNKPDIAASLARKWYENEGVDMIVDLPTSATALAAMEMSKRF
HHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
EKIMIVTDAASSDITGKSCSPYTAHWTYDTYSNAHTVGSAIVKNGGDTWFFITADYLFGH
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHCC
SVERDTGEVVKAAGGKVLGSTRHPLNNADFSSFLLQAQSSKAKIIGMANGGGDTINTIKQ
CCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
AAEFGIVAGGQKLAGIVMFISDIHSLGLKMANGLIITEAYYWDLNDRTREFGKKFHDRMK
HHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHH
RMPTMNQAATYSATLHYLKAVKAANSKDTKTVLAKMRETPVRDAFTDNGFLREDGRMVHS
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCEECCCHHHHHH
MFLFEVKKPEESKAPWDYYKMLAEVPGDQAFRPLKDGGCPLVKAE
HHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MHFIQRAAAAMTLATPLLLGASAFAQQQSPLKIGLLGDFQSVYSDIGGPGNVEAAKMAIE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHH
EMGGTMFGKPIEFISADVQNKPDIAASLARKWYENEGVDMIVDLPTSATALAAMEMSKRF
HHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
EKIMIVTDAASSDITGKSCSPYTAHWTYDTYSNAHTVGSAIVKNGGDTWFFITADYLFGH
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHCC
SVERDTGEVVKAAGGKVLGSTRHPLNNADFSSFLLQAQSSKAKIIGMANGGGDTINTIKQ
CCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
AAEFGIVAGGQKLAGIVMFISDIHSLGLKMANGLIITEAYYWDLNDRTREFGKKFHDRMK
HHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHH
RMPTMNQAATYSATLHYLKAVKAANSKDTKTVLAKMRETPVRDAFTDNGFLREDGRMVHS
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCEECCCHHHHHH
MFLFEVKKPEESKAPWDYYKMLAEVPGDQAFRPLKDGGCPLVKAE
HHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA