BacMap

Definition	Rhodopseudomonas palustris HaA2, complete genome.
Accession	NC_007778
Length	5,331,656

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The map label for this gene is gabD [H]

Identifier: 86750247

GI number: 86750247

Start: 3584160

End: 3585611

Strand: Reverse

Name: gabD [H]

Synonym: RPB_3136

Alternate gene names: 86750247

Gene position: 3585611-3584160 (Counterclockwise)

Preceding gene: 86750248

Following gene: 86750246

Centisome position: 67.25

GC content: 66.87

Gene sequence:

>1452_bases
ATGCTGATGCCGAGTGATCCTGGCCTGTTGGCCGAGCGCTGCCTGATTGGCGGCAAATGGTGTGGTGAGCCGGTCGATGC
TGTGTTCAACCCGGCGACGGGCGAGCGCATCGGCGCGGTGCCGCACTTCGGTGCGGACGAGGCCGACGAGGCGGTTCGCG
CCGCCGGGCTTGCATTCCGGCAGTGGTCGAAGCTGCTGGCGAAACAGCGCGCGGCGATGCTGCGCGGCTGGTTCGATCAG
ATCATCGCCCATCGCGACGATCTCGCACGGCTGCTGACGTCGGAGCAGGGCAAGCCGCTCGCCGAGGCACTGGGTGAAAT
CGACTATGCGGCATCGTTCGTCGAGTTCTATGCCGAAGAGGCGCGCCGCATTTACGGCGAGACGATTCCGGCGCACCGCG
CCGATTCCAGAACCATGGTGATCCGTCAGCCGGTCGGCGTCGTCGCGGCGATCACGCCGTGGAATTTTCCGGCCGCGATG
ATCACTCGCAAAGTGGCGCCGGCGCTCGCCGCCGGCTGCACGGTGGTGATCAAGCCGGCGCCGGAAACGCCGCTGACGGC
GCTTGCACTGGGCGTGCTGGCGCAGCGCGCAGGGTTTCCGGCAGGCGTGCTCAACATCATCACCGGCGACGCGCCTGCGA
TCGGCAAGGCGTGGACCGAGCATCCGACGGTGCGGGCGATCAGCTTCACCGGCTCCACCGAGGTCGGCAAGATCCTGATG
CGGCAGGCCGCGTCGACCGTGAAGAAGGTCGGGCTCGAGCTCGGCGGCAATGCGCCGTTCATCGTGTTCGACGATGCAGA
TCTCGACGCCGCGGTCGACGGCGTGATCGCCTCGAAGTTTCGCAACATGGGGCAGACCTGCGTCTGTGCCAACCGGATCT
ACGCGCAGAACGGGATCTACGACGCCTTCGTCGAGAAGCTCGCCGCCAAGGTTGCCACGTTGCGGGTCGGCAACGGACTC
GACGACGGCGTCACTCAGGGGCCGCTGATCACCAAGGAGGCGGTGGCCAAGGTCGAGCATCATCTCGCCGACGCCGTCGC
CAAGGGGGCCAAGATCGTGCTCGGCGGCAAGCGTCATGCGCTCGGACAAACTTTCTTCGAGCCGACCGTCGTCACCGGCG
TCACCGCCGACATGGTCGTCACGCGCGAGGAGACCTTCGGTCCGGTCGCTCCGGTGTATCGCTTCCGCGGCGAAGCCGAC
GTGATCGCGCAGGCCAACGACTCGCCGTTCGGACTGGCGGCGTATTTTTACGCCCGCGACCTCGGCCGGGTGTTCAGGGT
CGCCGAAGCGCTGGAGTCCGGGATGGTCGGCGTCAATTCGGCGCTGCTCGGAGCCGACGTGGTGCCGTTCGGCGGCGTCA
AGGAATCCGGCCTCGGCCGCGAAGGCTCGCGCCACGGCATCGAGGAATATGTCGAGACCAAATACATCCTGCTCGGCGGT
CTCGATCGCTGA

Upstream 100 bases:

>100_bases
ACCGCCTCCGACGCGATCGTCGACGAGGGGCTGGCGATCCTGGAGCGTTGCCTCGCTGCGTAGCACATGGCGCATCCGCG
CCGAGACGGGACTAATCGAG

Downstream 100 bases:

>100_bases
CGCTGTCATCTGCATTGCGACGACTATCAGATCCAGGGGAGACCGAGGCGTGACGACTGAGACATTGACGAAATCGGATG
CGATCACCGAGAGCCTGCGG

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MLMPSDPGLLAERCLIGGKWCGEPVDAVFNPATGERIGAVPHFGADEADEAVRAAGLAFRQWSKLLAKQRAAMLRGWFDQ
IIAHRDDLARLLTSEQGKPLAEALGEIDYAASFVEFYAEEARRIYGETIPAHRADSRTMVIRQPVGVVAAITPWNFPAAM
ITRKVAPALAAGCTVVIKPAPETPLTALALGVLAQRAGFPAGVLNIITGDAPAIGKAWTEHPTVRAISFTGSTEVGKILM
RQAASTVKKVGLELGGNAPFIVFDDADLDAAVDGVIASKFRNMGQTCVCANRIYAQNGIYDAFVEKLAAKVATLRVGNGL
DDGVTQGPLITKEAVAKVEHHLADAVAKGAKIVLGGKRHALGQTFFEPTVVTGVTADMVVTREETFGPVAPVYRFRGEAD
VIAQANDSPFGLAAYFYARDLGRVFRVAEALESGMVGVNSALLGADVVPFGGVKESGLGREGSRHGIEEYVETKYILLGG
LDR

Sequences:

>Translated_483_residues
MLMPSDPGLLAERCLIGGKWCGEPVDAVFNPATGERIGAVPHFGADEADEAVRAAGLAFRQWSKLLAKQRAAMLRGWFDQ
IIAHRDDLARLLTSEQGKPLAEALGEIDYAASFVEFYAEEARRIYGETIPAHRADSRTMVIRQPVGVVAAITPWNFPAAM
ITRKVAPALAAGCTVVIKPAPETPLTALALGVLAQRAGFPAGVLNIITGDAPAIGKAWTEHPTVRAISFTGSTEVGKILM
RQAASTVKKVGLELGGNAPFIVFDDADLDAAVDGVIASKFRNMGQTCVCANRIYAQNGIYDAFVEKLAAKVATLRVGNGL
DDGVTQGPLITKEAVAKVEHHLADAVAKGAKIVLGGKRHALGQTFFEPTVVTGVTADMVVTREETFGPVAPVYRFRGEAD
VIAQANDSPFGLAAYFYARDLGRVFRVAEALESGMVGVNSALLGADVVPFGGVKESGLGREGSRHGIEEYVETKYILLGG
LDR
>Mature_483_residues
MLMPSDPGLLAERCLIGGKWCGEPVDAVFNPATGERIGAVPHFGADEADEAVRAAGLAFRQWSKLLAKQRAAMLRGWFDQ
IIAHRDDLARLLTSEQGKPLAEALGEIDYAASFVEFYAEEARRIYGETIPAHRADSRTMVIRQPVGVVAAITPWNFPAAM
ITRKVAPALAAGCTVVIKPAPETPLTALALGVLAQRAGFPAGVLNIITGDAPAIGKAWTEHPTVRAISFTGSTEVGKILM
RQAASTVKKVGLELGGNAPFIVFDDADLDAAVDGVIASKFRNMGQTCVCANRIYAQNGIYDAFVEKLAAKVATLRVGNGL
DDGVTQGPLITKEAVAKVEHHLADAVAKGAKIVLGGKRHALGQTFFEPTVVTGVTADMVVTREETFGPVAPVYRFRGEAD
VIAQANDSPFGLAAYFYARDLGRVFRVAEALESGMVGVNSALLGADVVPFGGVKESGLGREGSRHGIEEYVETKYILLGG
LDR

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=480, Percent_Identity=55.8333333333333, Blast_Score=509, Evalue=1e-144,
Organism=Homo sapiens, GI25777721, Length=493, Percent_Identity=54.158215010142, Blast_Score=498, Evalue=1e-141,
Organism=Homo sapiens, GI25777730, Length=490, Percent_Identity=38.7755102040816, Blast_Score=322, Evalue=4e-88,
Organism=Homo sapiens, GI25777724, Length=486, Percent_Identity=39.7119341563786, Blast_Score=321, Evalue=8e-88,
Organism=Homo sapiens, GI153266822, Length=458, Percent_Identity=39.5196506550218, Blast_Score=313, Evalue=2e-85,
Organism=Homo sapiens, GI21361176, Length=455, Percent_Identity=39.7802197802198, Blast_Score=308, Evalue=5e-84,
Organism=Homo sapiens, GI12007648, Length=479, Percent_Identity=37.160751565762, Blast_Score=306, Evalue=3e-83,
Organism=Homo sapiens, GI25777732, Length=480, Percent_Identity=37.2916666666667, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI25777728, Length=412, Percent_Identity=40.7766990291262, Blast_Score=295, Evalue=9e-80,
Organism=Homo sapiens, GI21614513, Length=479, Percent_Identity=37.160751565762, Blast_Score=293, Evalue=2e-79,
Organism=Homo sapiens, GI238814322, Length=479, Percent_Identity=35.9081419624217, Blast_Score=293, Evalue=2e-79,
Organism=Homo sapiens, GI115387104, Length=467, Percent_Identity=35.5460385438972, Blast_Score=285, Evalue=8e-77,
Organism=Homo sapiens, GI25777726, Length=486, Percent_Identity=35.8024691358025, Blast_Score=268, Evalue=1e-71,
Organism=Homo sapiens, GI25952152, Length=471, Percent_Identity=33.9702760084926, Blast_Score=252, Evalue=7e-67,
Organism=Homo sapiens, GI310128093, Length=461, Percent_Identity=32.5379609544469, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI310128103, Length=462, Percent_Identity=32.2510822510823, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI188035924, Length=462, Percent_Identity=32.2510822510823, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI310128091, Length=461, Percent_Identity=31.0195227765727, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI301500698, Length=280, Percent_Identity=38.5714285714286, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI11095441, Length=474, Percent_Identity=29.535864978903, Blast_Score=199, Evalue=7e-51,
Organism=Homo sapiens, GI310128089, Length=326, Percent_Identity=33.4355828220859, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI223972651, Length=473, Percent_Identity=29.1754756871036, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=36.8, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI310128095, Length=309, Percent_Identity=33.3333333333333, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI73466520, Length=347, Percent_Identity=28.8184438040346, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI206597441, Length=381, Percent_Identity=29.3963254593176, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI206597439, Length=381, Percent_Identity=29.3963254593176, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI22907049, Length=381, Percent_Identity=29.3963254593176, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4557303, Length=347, Percent_Identity=28.8184438040346, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI25777736, Length=486, Percent_Identity=26.5432098765432, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI25777734, Length=486, Percent_Identity=26.5432098765432, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI238859541, Length=486, Percent_Identity=26.5432098765432, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI73695881, Length=350, Percent_Identity=28, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI73695879, Length=350, Percent_Identity=28, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310128087, Length=281, Percent_Identity=30.2491103202847, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4502043, Length=357, Percent_Identity=27.4509803921569, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI238814371, Length=357, Percent_Identity=27.4509803921569, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI71773324, Length=343, Percent_Identity=27.6967930029155, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI223972653, Length=473, Percent_Identity=26.215644820296, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI310128099, Length=225, Percent_Identity=29.7777777777778, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI310128101, Length=225, Percent_Identity=29.7777777777778, Blast_Score=90, Evalue=4e-18,
Organism=Escherichia coli, GI1789015, Length=479, Percent_Identity=62.6304801670146, Blast_Score=633, Evalue=0.0,
Organism=Escherichia coli, GI1787715, Length=472, Percent_Identity=40.0423728813559, Blast_Score=308, Evalue=4e-85,
Organism=Escherichia coli, GI1787684, Length=460, Percent_Identity=37.1739130434783, Blast_Score=307, Evalue=9e-85,
Organism=Escherichia coli, GI87081896, Length=460, Percent_Identity=37.6086956521739, Blast_Score=292, Evalue=3e-80,
Organism=Escherichia coli, GI1787558, Length=479, Percent_Identity=36.9519832985386, Blast_Score=284, Evalue=7e-78,
Organism=Escherichia coli, GI87081926, Length=448, Percent_Identity=33.4821428571429, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI1786504, Length=454, Percent_Identity=37.0044052863436, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI87082295, Length=492, Percent_Identity=32.3170731707317, Blast_Score=238, Evalue=9e-64,
Organism=Escherichia coli, GI1788042, Length=437, Percent_Identity=31.5789473684211, Blast_Score=185, Evalue=7e-48,
Organism=Escherichia coli, GI1787250, Length=449, Percent_Identity=31.6258351893096, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1787653, Length=343, Percent_Identity=24.198250728863, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=50.2145922746781, Blast_Score=431, Evalue=1e-121,
Organism=Caenorhabditis elegans, GI133930964, Length=476, Percent_Identity=38.655462184874, Blast_Score=312, Evalue=3e-85,
Organism=Caenorhabditis elegans, GI17562198, Length=455, Percent_Identity=40.4395604395604, Blast_Score=302, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI25144435, Length=456, Percent_Identity=37.9385964912281, Blast_Score=296, Evalue=1e-80,
Organism=Caenorhabditis elegans, GI25143874, Length=457, Percent_Identity=36.980306345733, Blast_Score=290, Evalue=2e-78,
Organism=Caenorhabditis elegans, GI25143876, Length=457, Percent_Identity=36.980306345733, Blast_Score=289, Evalue=2e-78,
Organism=Caenorhabditis elegans, GI32564736, Length=414, Percent_Identity=38.6473429951691, Blast_Score=279, Evalue=2e-75,
Organism=Caenorhabditis elegans, GI71995606, Length=464, Percent_Identity=35.7758620689655, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI17551164, Length=465, Percent_Identity=33.9784946236559, Blast_Score=246, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI115534176, Length=465, Percent_Identity=32.4731182795699, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71995613, Length=400, Percent_Identity=35.5, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI71986308, Length=456, Percent_Identity=30.7017543859649, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI32566756, Length=403, Percent_Identity=29.0322580645161, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25146394, Length=403, Percent_Identity=29.0322580645161, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25146391, Length=403, Percent_Identity=29.0322580645161, Blast_Score=153, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17534447, Length=462, Percent_Identity=29.6536796536797, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17564084, Length=422, Percent_Identity=28.9099526066351, Blast_Score=145, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI115532534, Length=392, Percent_Identity=30.3571428571429, Blast_Score=143, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI32564151, Length=417, Percent_Identity=29.9760191846523, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71990744, Length=304, Percent_Identity=29.2763157894737, Blast_Score=97, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319478, Length=482, Percent_Identity=49.3775933609959, Blast_Score=483, Evalue=1e-137,
Organism=Saccharomyces cerevisiae, GI6320917, Length=450, Percent_Identity=39.7777777777778, Blast_Score=323, Evalue=3e-89,
Organism=Saccharomyces cerevisiae, GI6324950, Length=449, Percent_Identity=36.5256124721604, Blast_Score=298, Evalue=1e-81,
Organism=Saccharomyces cerevisiae, GI6323822, Length=479, Percent_Identity=35.9081419624217, Blast_Score=273, Evalue=4e-74,
Organism=Saccharomyces cerevisiae, GI6323821, Length=477, Percent_Identity=35.8490566037736, Blast_Score=272, Evalue=1e-73,
Organism=Saccharomyces cerevisiae, GI6325196, Length=453, Percent_Identity=34.4370860927152, Blast_Score=270, Evalue=4e-73,
Organism=Saccharomyces cerevisiae, GI6321828, Length=479, Percent_Identity=26.7223382045929, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6321826, Length=429, Percent_Identity=27.972027972028, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6323757, Length=419, Percent_Identity=25.5369928400955, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281362580, Length=481, Percent_Identity=50.3118503118503, Blast_Score=479, Evalue=1e-135,
Organism=Drosophila melanogaster, GI62472918, Length=481, Percent_Identity=50.3118503118503, Blast_Score=479, Evalue=1e-135,
Organism=Drosophila melanogaster, GI62472926, Length=481, Percent_Identity=50.3118503118503, Blast_Score=479, Evalue=1e-135,
Organism=Drosophila melanogaster, GI62472936, Length=481, Percent_Identity=50.3118503118503, Blast_Score=479, Evalue=1e-135,
Organism=Drosophila melanogaster, GI21356737, Length=481, Percent_Identity=50.3118503118503, Blast_Score=479, Evalue=1e-135,
Organism=Drosophila melanogaster, GI24650465, Length=456, Percent_Identity=41.2280701754386, Blast_Score=343, Evalue=2e-94,
Organism=Drosophila melanogaster, GI20129399, Length=483, Percent_Identity=37.0600414078675, Blast_Score=300, Evalue=2e-81,
Organism=Drosophila melanogaster, GI24585660, Length=471, Percent_Identity=36.3057324840764, Blast_Score=293, Evalue=2e-79,
Organism=Drosophila melanogaster, GI24666674, Length=488, Percent_Identity=28.8934426229508, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24638878, Length=476, Percent_Identity=27.3109243697479, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI24638876, Length=476, Percent_Identity=27.3109243697479, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI281360303, Length=448, Percent_Identity=26.3392857142857, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI45552499, Length=448, Percent_Identity=26.3392857142857, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI281360301, Length=450, Percent_Identity=26.4444444444444, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI281360299, Length=450, Percent_Identity=26.4444444444444, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI281360297, Length=450, Percent_Identity=26.4444444444444, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI281360295, Length=450, Percent_Identity=26.4444444444444, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24586250, Length=450, Percent_Identity=26.4444444444444, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24668425, Length=450, Percent_Identity=24.2222222222222, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24668417, Length=450, Percent_Identity=24.2222222222222, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24668413, Length=450, Percent_Identity=24.2222222222222, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI28571798, Length=406, Percent_Identity=25.8620689655172, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28571796, Length=406, Percent_Identity=25.8620689655172, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28571794, Length=406, Percent_Identity=25.8620689655172, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28571806, Length=406, Percent_Identity=25.8620689655172, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI28571802, Length=406, Percent_Identity=25.8620689655172, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI28571800, Length=406, Percent_Identity=25.8620689655172, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281360293, Length=268, Percent_Identity=26.4925373134328, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51223; Mature: 51223

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMPSDPGLLAERCLIGGKWCGEPVDAVFNPATGERIGAVPHFGADEADEAVRAAGLAFR
CCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QWSKLLAKQRAAMLRGWFDQIIAHRDDLARLLTSEQGKPLAEALGEIDYAASFVEFYAEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARRIYGETIPAHRADSRTMVIRQPVGVVAAITPWNFPAAMITRKVAPALAAGCTVVIKPA
HHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
PETPLTALALGVLAQRAGFPAGVLNIITGDAPAIGKAWTEHPTVRAISFTGSTEVGKILM
CCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH
RQAASTVKKVGLELGGNAPFIVFDDADLDAAVDGVIASKFRNMGQTCVCANRIYAQNGIY
HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH
DAFVEKLAAKVATLRVGNGLDDGVTQGPLITKEAVAKVEHHLADAVAKGAKIVLGGKRHA
HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHH
LGQTFFEPTVVTGVTADMVVTREETFGPVAPVYRFRGEADVIAQANDSPFGLAAYFYARD
HHHHHCCCHHHHCCCHHEEEECHHCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH
LGRVFRVAEALESGMVGVNSALLGADVVPFGGVKESGLGREGSRHGIEEYVETKYILLGG
HHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEECC
LDR
CCC
>Mature Secondary Structure
MLMPSDPGLLAERCLIGGKWCGEPVDAVFNPATGERIGAVPHFGADEADEAVRAAGLAFR
CCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QWSKLLAKQRAAMLRGWFDQIIAHRDDLARLLTSEQGKPLAEALGEIDYAASFVEFYAEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARRIYGETIPAHRADSRTMVIRQPVGVVAAITPWNFPAAMITRKVAPALAAGCTVVIKPA
HHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
PETPLTALALGVLAQRAGFPAGVLNIITGDAPAIGKAWTEHPTVRAISFTGSTEVGKILM
CCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH
RQAASTVKKVGLELGGNAPFIVFDDADLDAAVDGVIASKFRNMGQTCVCANRIYAQNGIY
HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH
DAFVEKLAAKVATLRVGNGLDDGVTQGPLITKEAVAKVEHHLADAVAKGAKIVLGGKRHA
HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHH
LGQTFFEPTVVTGVTADMVVTREETFGPVAPVYRFRGEADVIAQANDSPFGLAAYFYARD
HHHHHCCCHHHHCCCHHEEEECHHCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH
LGRVFRVAEALESGMVGVNSALLGADVVPFGGVKESGLGREGSRHGIEEYVETKYILLGG
HHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEECC
LDR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]