| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fecR [H]
Identifier: 86750238
GI number: 86750238
Start: 3573289
End: 3574269
Strand: Reverse
Name: fecR [H]
Synonym: RPB_3127
Alternate gene names: 86750238
Gene position: 3574269-3573289 (Counterclockwise)
Preceding gene: 86750239
Following gene: 86750237
Centisome position: 67.04
GC content: 65.24
Gene sequence:
>981_bases ATGACCGAGTCGGACGATCAGAACATGGCAGCCGATACGCGGGAGGATCAAGCCTTCGAGCGGCTGACGCGTTTGACCTC CGGCGAGGTCACCACGGGCGAATTGCAGGCCTTGGCGCTTTGGCGCGCGCAGAGTCCGGAGAACGAGGCGGCTTTCGTGG AAGCCGGCAAGCTGTGGCATTCCGTCAAGCCGGCCGTCGAGAGAGTTGCGCGCCAACGCCGCGGCATGGCCGCGCCGACG TCCGGAATGCCCATGCGGATGGGGCGTCGAGCCATGCTCGGCGGCGCGCTGGCCGCGAGTGCGGCCTATCTGGTCGTGCG GCCACCGCTCGGCCTGTGGTCGTCGCTGTCCGAACTGACATCCGACTATAGGACAGTGACTGGCCAGCAGCGGCGGGTCA CGACCGAGGGGGGAGCTACGATCGAGCTCAACACCCGAACAAGCGTCGACATACGGCTGGCCGGCGACACCGAGCGGATC GAGCTGATAGCCGGCGAAGCTGCGATCACGACGGCGGTGCGTGCGGCTCGATCGATCGTGGCGCTGGCGGGCGACGGACA GGCAACCGCGACGGATGCGATGTTCAATATGCGCCGCGATGGGCCTTCAGTCTGCATCACATGCGTGAGTGGGACAGTCC TGGTCGAGCAGCGCGGAGTGCCTGTTACGTTGCGGCAAAAGCAGCAGGTGTCCTACACGGATGCGGGCTTGGGTCCGTTG GTCGAGATCGATCCGGCCGGCGTGACGGCCTGGCAGCAAGGCATCCTCGCCTTTCATGACGAACCGCTCGGCCGGGTCGT CGATGAAGTCAATCGCTACTGGCCCGGCAAGATCATCGTGGCGAACGCCAGCCTCGCGAAACGTCCGGTCACGGCGCGCT TCAAGCTCGACCGGCTGGAGGATGCCATCACCCAGATTCAGCTGGTGTTTCACGCCAGTGTCACAAGGCTGCCGGGAGGT GTCGTGATCTTGAGCTCTTGA
Upstream 100 bases:
>100_bases AAAATAGCGCCATGATGTTTCGCTTCGGGCTTGCGGAAATCGTCATAACGGGTAGGGCAGGCGGCGATCGCGACCTGACG CGGGAGGGCGACGCATTCGC
Downstream 100 bases:
>100_bases ACGGCGCGAGGCCTCCGATCGAAAGCGGACGTTCTGAAAAGAATCTTCGGCAAAGCATTTCGTTCGCGGGATGGCTGGTT CGTCATACCGGTGAGAGGCA
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTESDDQNMAADTREDQAFERLTRLTSGEVTTGELQALALWRAQSPENEAAFVEAGKLWHSVKPAVERVARQRRGMAAPT SGMPMRMGRRAMLGGALAASAAYLVVRPPLGLWSSLSELTSDYRTVTGQQRRVTTEGGATIELNTRTSVDIRLAGDTERI ELIAGEAAITTAVRAARSIVALAGDGQATATDAMFNMRRDGPSVCITCVSGTVLVEQRGVPVTLRQKQQVSYTDAGLGPL VEIDPAGVTAWQQGILAFHDEPLGRVVDEVNRYWPGKIIVANASLAKRPVTARFKLDRLEDAITQIQLVFHASVTRLPGG VVILSS
Sequences:
>Translated_326_residues MTESDDQNMAADTREDQAFERLTRLTSGEVTTGELQALALWRAQSPENEAAFVEAGKLWHSVKPAVERVARQRRGMAAPT SGMPMRMGRRAMLGGALAASAAYLVVRPPLGLWSSLSELTSDYRTVTGQQRRVTTEGGATIELNTRTSVDIRLAGDTERI ELIAGEAAITTAVRAARSIVALAGDGQATATDAMFNMRRDGPSVCITCVSGTVLVEQRGVPVTLRQKQQVSYTDAGLGPL VEIDPAGVTAWQQGILAFHDEPLGRVVDEVNRYWPGKIIVANASLAKRPVTARFKLDRLEDAITQIQLVFHASVTRLPGG VVILSS >Mature_325_residues TESDDQNMAADTREDQAFERLTRLTSGEVTTGELQALALWRAQSPENEAAFVEAGKLWHSVKPAVERVARQRRGMAAPTS GMPMRMGRRAMLGGALAASAAYLVVRPPLGLWSSLSELTSDYRTVTGQQRRVTTEGGATIELNTRTSVDIRLAGDTERIE LIAGEAAITTAVRAARSIVALAGDGQATATDAMFNMRRDGPSVCITCVSGTVLVEQRGVPVTLRQKQQVSYTDAGLGPLV EIDPAGVTAWQQGILAFHDEPLGRVVDEVNRYWPGKIIVANASLAKRPVTARFKLDRLEDAITQIQLVFHASVTRLPGGV VILSS
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35107; Mature: 34976
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESDDQNMAADTREDQAFERLTRLTSGEVTTGELQALALWRAQSPENEAAFVEAGKLWH CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHH SVKPAVERVARQRRGMAAPTSGMPMRMGRRAMLGGALAASAAYLVVRPPLGLWSSLSELT HHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCEEEEEEECCCHHHHHHHHHH SDYRTVTGQQRRVTTEGGATIELNTRTSVDIRLAGDTERIELIAGEAAITTAVRAARSIV HHHHHCCCCCEEEEECCCCEEEEECCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHEE ALAGDGQATATDAMFNMRRDGPSVCITCVSGTVLVEQRGVPVTLRQKQQVSYTDAGLGPL EEECCCCCHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCE VEIDPAGVTAWQQGILAFHDEPLGRVVDEVNRYWPGKIIVANASLAKRPVTARFKLDRLE EEECCCCCHHHHHCHHEECCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCEEEEEHHHHH DAITQIQLVFHASVTRLPGGVVILSS HHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure TESDDQNMAADTREDQAFERLTRLTSGEVTTGELQALALWRAQSPENEAAFVEAGKLWH CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHH SVKPAVERVARQRRGMAAPTSGMPMRMGRRAMLGGALAASAAYLVVRPPLGLWSSLSELT HHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCEEEEEEECCCHHHHHHHHHH SDYRTVTGQQRRVTTEGGATIELNTRTSVDIRLAGDTERIELIAGEAAITTAVRAARSIV HHHHHCCCCCEEEEECCCCEEEEECCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHEE ALAGDGQATATDAMFNMRRDGPSVCITCVSGTVLVEQRGVPVTLRQKQQVSYTDAGLGPL EEECCCCCHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCE VEIDPAGVTAWQQGILAFHDEPLGRVVDEVNRYWPGKIIVANASLAKRPVTARFKLDRLE EEECCCCCHHHHHCHHEECCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCEEEEEHHHHH DAITQIQLVFHASVTRLPGGVVILSS HHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]