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The map label for this gene is prrC [H]

Identifier: 86750170

GI number: 86750170

Start: 3483476

End: 3484681

Strand: Reverse

Name: prrC [H]

Synonym: RPB_3054

Alternate gene names: 86750170

Gene position: 3484681-3483476 (Counterclockwise)

Preceding gene: 86750171

Following gene: 86750169

Centisome position: 65.36

GC content: 47.43

Gene sequence:

>1206_bases
ATGGGACAGACGCTGACCGAAATTGCTAAAACGCTGCGAGATGCCGACAAGAAGGTGCAGCTGATCTATGCGTTCAATGC
CTCCGGCAAGACGCGACTGTCGCGCGAATTCAGGGAACTGATCGACCCGAAGACCGAGGAACGGGACGACGATTATCGCC
CGAAGGTGCTCTACTACAACGCCTTCACCGAAGACCTGTTCTATTGGGACAATGATCTGACTGGCGATGTCGAGCGGAAG
CTTTGTATCCAGCCGAATGCGTTCACCAAATCCGCCTTTGAAGATCTTGGGCTCGACATCAACGTCATCACCGAATTTCA
GCGTTACACTCAGCCGAATCTGACGCCCCGCTTCAACGAGGAGTACAAAGCCAAAGGCAGGGATGGCAACGAGGTCACCG
TGCCTGCGTTTTCTGAAGTAACTTTCTCACTCGAACGCGGCGACGACGAAAGCGTCGGAAATCTGAAAATCTCGAAGGGT
GAAGAAAGCAATTTCATTTGGAGCGTGTTCTATTGCCTGCTGGATCAGGTCATCAGTACTCGAAACGTCGTCGACGTGGA
CGAGCGTGAGACGGATCAATTCAATAACCTCGAGTACATATTCATCGATGATCCTGTCAGCTCCCTCGATGAGAACCACC
TCATCCAGCTTGCGGTCGATGTAGCTCACCTCGTAAAAAGGAGTGCTTATGTCGAAGGCGTAGGTTTGAGGTTTGTCATT
ACAACGCACAACCCATTATTCTTTAATGTACTTCACAATGAATTAAATGGTGATGACAAAGCACTGAGCTACAAGGGAAA
GACGTACTCAAAATACCGCCTTGAAAAAGAAGGAGATGGAACTTTCAGTTTGTCGCCACAGCCGAACGACTCCCCGTTTT
CGTATCACCTGTACTTGCTCCGAGAGCTTCAAGCAGCTTCAGAAAATGGGGAAATAAAAAAGTATCACTTCAACTTCATA
CGGAATATTTTGGAAAAAAGCTCGACATTTCTCGGTCATAATCGTTGGAATGAACTTCTTCCCAAGACCGCCGACGGTAG
GCCAAATCCTTATCAATCAAGAATTCTAAATATTTCGAGCCACTCCAAGCAATCTGGCGAAGAGATTCAGTACATAAGCG
ATGATGACAAGCGGGTTTTTCGATACTTAGTCAAGAATATTGCCAAGAATTATCAAAGTTGGCATTGGGAAGGTGAAAAT
GCCTGA

Upstream 100 bases:

>100_bases
TGAGATCCTGCCGCGTGAAATCGAGCTGCGTGAAAAGCAGTATGCCTATTACCGCGATCAGCTGCTGAGCTTCCCCAAGC
CGGACGCGGAGGCTTTCTAA

Downstream 100 bases:

>100_bases
GCAGACCACTCCCATAGCTGAGACCAATCGCTTCATCGTGCTCGATAAATATGTGCGCGCCTGGGAAGCCGCTGACAGCT
ATCAGTCCGAGGCCGATCTT

Product: anticodon nuclease PrrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MGQTLTEIAKTLRDADKKVQLIYAFNASGKTRLSREFRELIDPKTEERDDDYRPKVLYYNAFTEDLFYWDNDLTGDVERK
LCIQPNAFTKSAFEDLGLDINVITEFQRYTQPNLTPRFNEEYKAKGRDGNEVTVPAFSEVTFSLERGDDESVGNLKISKG
EESNFIWSVFYCLLDQVISTRNVVDVDERETDQFNNLEYIFIDDPVSSLDENHLIQLAVDVAHLVKRSAYVEGVGLRFVI
TTHNPLFFNVLHNELNGDDKALSYKGKTYSKYRLEKEGDGTFSLSPQPNDSPFSYHLYLLRELQAASENGEIKKYHFNFI
RNILEKSSTFLGHNRWNELLPKTADGRPNPYQSRILNISSHSKQSGEEIQYISDDDKRVFRYLVKNIAKNYQSWHWEGEN
A

Sequences:

>Translated_401_residues
MGQTLTEIAKTLRDADKKVQLIYAFNASGKTRLSREFRELIDPKTEERDDDYRPKVLYYNAFTEDLFYWDNDLTGDVERK
LCIQPNAFTKSAFEDLGLDINVITEFQRYTQPNLTPRFNEEYKAKGRDGNEVTVPAFSEVTFSLERGDDESVGNLKISKG
EESNFIWSVFYCLLDQVISTRNVVDVDERETDQFNNLEYIFIDDPVSSLDENHLIQLAVDVAHLVKRSAYVEGVGLRFVI
TTHNPLFFNVLHNELNGDDKALSYKGKTYSKYRLEKEGDGTFSLSPQPNDSPFSYHLYLLRELQAASENGEIKKYHFNFI
RNILEKSSTFLGHNRWNELLPKTADGRPNPYQSRILNISSHSKQSGEEIQYISDDDKRVFRYLVKNIAKNYQSWHWEGEN
A
>Mature_400_residues
GQTLTEIAKTLRDADKKVQLIYAFNASGKTRLSREFRELIDPKTEERDDDYRPKVLYYNAFTEDLFYWDNDLTGDVERKL
CIQPNAFTKSAFEDLGLDINVITEFQRYTQPNLTPRFNEEYKAKGRDGNEVTVPAFSEVTFSLERGDDESVGNLKISKGE
ESNFIWSVFYCLLDQVISTRNVVDVDERETDQFNNLEYIFIDDPVSSLDENHLIQLAVDVAHLVKRSAYVEGVGLRFVIT
THNPLFFNVLHNELNGDDKALSYKGKTYSKYRLEKEGDGTFSLSPQPNDSPFSYHLYLLRELQAASENGEIKKYHFNFIR
NILEKSSTFLGHNRWNELLPKTADGRPNPYQSRILNISSHSKQSGEEIQYISDDDKRVFRYLVKNIAKNYQSWHWEGENA

Specific function: Anticodon nuclease triggers the cleavage ligation of tRNA(Lys). It is activated by T4 stp protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46540; Mature: 46409

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTLTEIAKTLRDADKKVQLIYAFNASGKTRLSREFRELIDPKTEERDDDYRPKVLYYN
CCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
AFTEDLFYWDNDLTGDVERKLCIQPNAFTKSAFEDLGLDINVITEFQRYTQPNLTPRFNE
CHHCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCH
EYKAKGRDGNEVTVPAFSEVTFSLERGDDESVGNLKISKGEESNFIWSVFYCLLDQVIST
HHHCCCCCCCEEEECCHHHEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC
RNVVDVDERETDQFNNLEYIFIDDPVSSLDENHLIQLAVDVAHLVKRSAYVEGVGLRFVI
CCCEECCCCCCCCCCCEEEEEECCCHHHCCCCCEEHHHHHHHHHHHHHHHEECCCEEEEE
TTHNPLFFNVLHNELNGDDKALSYKGKTYSKYRLEKEGDGTFSLSPQPNDSPFSYHLYLL
EECCCEEEEEHHHHCCCCCCEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHH
RELQAASENGEIKKYHFNFIRNILEKSSTFLGHNRWNELLPKTADGRPNPYQSRILNISS
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHEEECCC
HSKQSGEEIQYISDDDKRVFRYLVKNIAKNYQSWHWEGENA
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GQTLTEIAKTLRDADKKVQLIYAFNASGKTRLSREFRELIDPKTEERDDDYRPKVLYYN
CCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
AFTEDLFYWDNDLTGDVERKLCIQPNAFTKSAFEDLGLDINVITEFQRYTQPNLTPRFNE
CHHCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCH
EYKAKGRDGNEVTVPAFSEVTFSLERGDDESVGNLKISKGEESNFIWSVFYCLLDQVIST
HHHCCCCCCCEEEECCHHHEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC
RNVVDVDERETDQFNNLEYIFIDDPVSSLDENHLIQLAVDVAHLVKRSAYVEGVGLRFVI
CCCEECCCCCCCCCCCEEEEEECCCHHHCCCCCEEHHHHHHHHHHHHHHHEECCCEEEEE
TTHNPLFFNVLHNELNGDDKALSYKGKTYSKYRLEKEGDGTFSLSPQPNDSPFSYHLYLL
EECCCEEEEEHHHHCCCCCCEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHH
RELQAASENGEIKKYHFNFIRNILEKSSTFLGHNRWNELLPKTADGRPNPYQSRILNISS
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHEEECCC
HSKQSGEEIQYISDDDKRVFRYLVKNIAKNYQSWHWEGENA
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1691706 [H]