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The map label for this gene is yabI [H]

Identifier: 86750094

GI number: 86750094

Start: 3388811

End: 3389341

Strand: Reverse

Name: yabI [H]

Synonym: RPB_2977

Alternate gene names: 86750094

Gene position: 3389341-3388811 (Counterclockwise)

Preceding gene: 86750099

Following gene: 86750093

Centisome position: 63.57

GC content: 67.04

Gene sequence:

>531_bases
ATGGAAGAAGCATTTCGCGGCCTCATCGATTTCGTGCGCGAGCACCAGGCCTGGGCCGCGCCGGTGGTGCTGGTGCTGGC
GTTCGGGGAATCGCTCGCCTTCATCTCGCTGGTGGTGCCGGCCTGGGGCGCGCTGGTGGCGATCGGCGCGCTGGTCGGCG
CCAGCGGCATCAGTTTCTGGCCGGTGTGGCTCGGCGCTGCGCTCGGTGCCTCGCTTGGCGATTGGCTGTCGTACTGGTTC
GGCTATCGCTACAAGGACAGCGTCGCCCAGATGTGGCCGCTGTCGAAGTTCCCCGGGCTGCTGCTGCGCGGCGAGGACTT
CGTGCAGAAATGGGGGGTGCCGAGCATCTTCATCGGCCGCTTCTTCGGGCCGCTGCGCGCCTCGGTGCCGCTCGCGGCGG
GCATCTTCGAGATGCCGTATTGGCATTTCCAGATCGCCAATGTGCTGTCGGCGCTGGTGTGGTCGGCGGTGCTGCTGCTG
TTCGGCGATGCGCTGTCGATCGGAGCGAACTGGCTGGTGCGGTCGATCTGA

Upstream 100 bases:

>100_bases
AATCCGTCACGGGGGGCGGCGCTTGTCGGAAGGGCGGGGGGCCGTGCTATGCGACAGCAAGATGAACCGCCGGCGGGTCG
CCCGCAGGTCGGAAGGGACA

Downstream 100 bases:

>100_bases
CGCAGAGCGGCAGCGGAATATGCAACGCCCGGCGGTGTTGTGGATCGGGTCGCGTGCTGCGTCCCGCGCGATCAAACTGT
CGTCATGACGCAAACAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MEEAFRGLIDFVREHQAWAAPVVLVLAFGESLAFISLVVPAWGALVAIGALVGASGISFWPVWLGAALGASLGDWLSYWF
GYRYKDSVAQMWPLSKFPGLLLRGEDFVQKWGVPSIFIGRFFGPLRASVPLAAGIFEMPYWHFQIANVLSALVWSAVLLL
FGDALSIGANWLVRSI

Sequences:

>Translated_176_residues
MEEAFRGLIDFVREHQAWAAPVVLVLAFGESLAFISLVVPAWGALVAIGALVGASGISFWPVWLGAALGASLGDWLSYWF
GYRYKDSVAQMWPLSKFPGLLLRGEDFVQKWGVPSIFIGRFFGPLRASVPLAAGIFEMPYWHFQIANVLSALVWSAVLLL
FGDALSIGANWLVRSI
>Mature_176_residues
MEEAFRGLIDFVREHQAWAAPVVLVLAFGESLAFISLVVPAWGALVAIGALVGASGISFWPVWLGAALGASLGDWLSYWF
GYRYKDSVAQMWPLSKFPGLLLRGEDFVQKWGVPSIFIGRFFGPLRASVPLAAGIFEMPYWHFQIANVLSALVWSAVLLL
FGDALSIGANWLVRSI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=147, Percent_Identity=34.0136054421769, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 19304; Mature: 19304

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEAFRGLIDFVREHQAWAAPVVLVLAFGESLAFISLVVPAWGALVAIGALVGASGISFW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PVWLGAALGASLGDWLSYWFGYRYKDSVAQMWPLSKFPGLLLRGEDFVQKWGVPSIFIGR
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCEECCHHHHHHCCCCHHHHHH
FFGPLRASVPLAAGIFEMPYWHFQIANVLSALVWSAVLLLFGDALSIGANWLVRSI
HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEEAFRGLIDFVREHQAWAAPVVLVLAFGESLAFISLVVPAWGALVAIGALVGASGISFW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PVWLGAALGASLGDWLSYWFGYRYKDSVAQMWPLSKFPGLLLRGEDFVQKWGVPSIFIGR
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCEECCHHHHHHCCCCHHHHHH
FFGPLRASVPLAAGIFEMPYWHFQIANVLSALVWSAVLLLFGDALSIGANWLVRSI
HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]