Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86750093

Identifier: 86750093

GI number: 86750093

Start: 3387666

End: 3388655

Strand: Reverse

Name: 86750093

Synonym: RPB_2976

Alternate gene names: NA

Gene position: 3388655-3387666 (Counterclockwise)

Preceding gene: 86750094

Following gene: 86750090

Centisome position: 63.56

GC content: 66.67

Gene sequence:

>990_bases
ATGGACATGACCCGACGTCACGCCCTGACTGCCGCCGCCGCACTCGCGGCCGCGCCGTTGCTGCGCAGTGCTCCCGCCGA
GGCGGCCGCCCCGCTCGCCGACAAGCAGGCGCCGAGCTTCTACCGTTACAAGGTCGGCGACGCACAGGTGAACGTGATCT
CCGACGGCGTGAACAGCTTTCCGCTCGGCGACAGCTTCGTGCTCAACGCCAAGAAGGACGAGGTCAACAAGGCGCTCGAA
GCGGCCTTCCTGCCCAAGGACAGGATCTCGATCAACTTCGCCCCGCTGGTGATCAACACCGGCGGCAAGCTGGTCGTGGT
CGACACCGGCAACGGCCCCGCCGCGTTTGCGTCGAGCAAGGGCAATGTCGGGCAGTTCGCCGGCAACATGGCGGCCGCCG
GCCTCGATCCCAAGGCGGTCGACATCGTGGTGATCTCGCATTTCCACGGCGACCACATCAACGGCCTGCTCGGCGCCGAC
AACCAGCCGGCGTTTCCCAATGCCGAGGTGCTGGTGCCGGCGGCGGAGTGGAAGTACTTCATGGACGACGGCGAGATGAG
CCGCGCCTCCGGCGAGCGGATGCAGGGCGTGTTCAAGAACGCCCGCCGGGTGTTCGAGGCCGGGCTGAACAAGAAGGTCA
CGCCGTATGAATGGGGCAAGGACGTCGCACCCGGCCTGCTCGCGGTGGAATCGGCCGGCCACACCCCGGGGCACACCTCG
TTCGTGCTGTCGTCCGGTTCGGACAAGGTGTTCATTCAGTCCGACATCACCAATTTGCCGGCGCTGTTCGTCGCCAATCC
CGGCTGGCACCTGATGTTCGACCAGGACCCGGCGATGGCCGAGACCACCCGCCGCAAGGTCTACGACATGCTGGTCGCCG
ACAAGATGCGGGTGCAGGGCTTCCACTATCCGTTCCCCGCCAACGGCTACGTCCAGAAGGACGGCAGCGGCTATCGCCTG
GTGCCGGCGCCGTGGAGCCCGGTGATCTGA

Upstream 100 bases:

>100_bases
GCTGCGTCCCGCGCGATCAAACTGTCGTCATGACGCAAACAAGTCATCGGCCGCGGCGTAGAGTGCCGCCGGCCCGAACC
AACCCATCCGAGGAACCGCC

Downstream 100 bases:

>100_bases
AGACCGTCGTCGGCGCGCGCTGATTTCGTCATTGCGAGCGAAGCGAAGCAATCCAGTGATCGATGCACTAATCTGGATTG
CTTCGTCGCTTCGCTCCTCG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Twin-Arginine Translocation Pathway Signal; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Metal Dependent Hydrolase; Beta-Lactamase; Metallo-Beta-Lactamase; Hydrolase; Methyl Parathion Hydrolase; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Protein; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MDMTRRHALTAAAALAAAPLLRSAPAEAAAPLADKQAPSFYRYKVGDAQVNVISDGVNSFPLGDSFVLNAKKDEVNKALE
AAFLPKDRISINFAPLVINTGGKLVVVDTGNGPAAFASSKGNVGQFAGNMAAAGLDPKAVDIVVISHFHGDHINGLLGAD
NQPAFPNAEVLVPAAEWKYFMDDGEMSRASGERMQGVFKNARRVFEAGLNKKVTPYEWGKDVAPGLLAVESAGHTPGHTS
FVLSSGSDKVFIQSDITNLPALFVANPGWHLMFDQDPAMAETTRRKVYDMLVADKMRVQGFHYPFPANGYVQKDGSGYRL
VPAPWSPVI

Sequences:

>Translated_329_residues
MDMTRRHALTAAAALAAAPLLRSAPAEAAAPLADKQAPSFYRYKVGDAQVNVISDGVNSFPLGDSFVLNAKKDEVNKALE
AAFLPKDRISINFAPLVINTGGKLVVVDTGNGPAAFASSKGNVGQFAGNMAAAGLDPKAVDIVVISHFHGDHINGLLGAD
NQPAFPNAEVLVPAAEWKYFMDDGEMSRASGERMQGVFKNARRVFEAGLNKKVTPYEWGKDVAPGLLAVESAGHTPGHTS
FVLSSGSDKVFIQSDITNLPALFVANPGWHLMFDQDPAMAETTRRKVYDMLVADKMRVQGFHYPFPANGYVQKDGSGYRL
VPAPWSPVI
>Mature_329_residues
MDMTRRHALTAAAALAAAPLLRSAPAEAAAPLADKQAPSFYRYKVGDAQVNVISDGVNSFPLGDSFVLNAKKDEVNKALE
AAFLPKDRISINFAPLVINTGGKLVVVDTGNGPAAFASSKGNVGQFAGNMAAAGLDPKAVDIVVISHFHGDHINGLLGAD
NQPAFPNAEVLVPAAEWKYFMDDGEMSRASGERMQGVFKNARRVFEAGLNKKVTPYEWGKDVAPGLLAVESAGHTPGHTS
FVLSSGSDKVFIQSDITNLPALFVANPGWHLMFDQDPAMAETTRRKVYDMLVADKMRVQGFHYPFPANGYVQKDGSGYRL
VPAPWSPVI

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35168; Mature: 35168

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTRRHALTAAAALAAAPLLRSAPAEAAAPLADKQAPSFYRYKVGDAQVNVISDGVNSF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCC
PLGDSFVLNAKKDEVNKALEAAFLPKDRISINFAPLVINTGGKLVVVDTGNGPAAFASSK
CCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEECCCCCEEECCCC
GNVGQFAGNMAAAGLDPKAVDIVVISHFHGDHINGLLGADNQPAFPNAEVLVPAAEWKYF
CCHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEHHHCEEE
MDDGEMSRASGERMQGVFKNARRVFEAGLNKKVTPYEWGKDVAPGLLAVESAGHTPGHTS
ECCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCE
FVLSSGSDKVFIQSDITNLPALFVANPGWHLMFDQDPAMAETTRRKVYDMLVADKMRVQG
EEEECCCCEEEEEECCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCE
FHYPFPANGYVQKDGSGYRLVPAPWSPVI
ECCCCCCCCEEEECCCCEEEECCCCCCCC
>Mature Secondary Structure
MDMTRRHALTAAAALAAAPLLRSAPAEAAAPLADKQAPSFYRYKVGDAQVNVISDGVNSF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCC
PLGDSFVLNAKKDEVNKALEAAFLPKDRISINFAPLVINTGGKLVVVDTGNGPAAFASSK
CCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEECCCCCEEECCCC
GNVGQFAGNMAAAGLDPKAVDIVVISHFHGDHINGLLGADNQPAFPNAEVLVPAAEWKYF
CCHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEHHHCEEE
MDDGEMSRASGERMQGVFKNARRVFEAGLNKKVTPYEWGKDVAPGLLAVESAGHTPGHTS
ECCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCE
FVLSSGSDKVFIQSDITNLPALFVANPGWHLMFDQDPAMAETTRRKVYDMLVADKMRVQG
EEEECCCCEEEEEECCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCE
FHYPFPANGYVQKDGSGYRLVPAPWSPVI
ECCCCCCCCEEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA