| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86750061
Identifier: 86750061
GI number: 86750061
Start: 3356382
End: 3356546
Strand: Reverse
Name: 86750061
Synonym: RPB_2944
Alternate gene names: NA
Gene position: 3356546-3356382 (Counterclockwise)
Preceding gene: 86750062
Following gene: 86750060
Centisome position: 62.96
GC content: 55.76
Gene sequence:
>165_bases ATGTCACTCGGAACGATCATTCTCATCATCCTGATCATCGCGCTGTTGGGAGGCTTCACCGGAATCGGAGGTGGGCCGTT CTACGGCACTGGATATTACGGCGGCGGCGGTCTCGGCCTTGTGGTCGTCATTCTGCTGATTCTGCTGTTGCTCGGAAAGC TATGA
Upstream 100 bases:
>100_bases CACCGTCCGAGCCACATCATGGCAGGCCCTTGAATCCTGATCATTCGTTCTCGTTCTGACGTCCCGACGCTGTTGGAACG ACACCAGACAGGAGTCTCAC
Downstream 100 bases:
>100_bases ACGCAGGAACTCAACTCCGGAAAAGGACGATATCATGCGAAGAACCATCACATCATTGGCGGTCGCTGCTGTGTTGATCG GGTCGGCGACAATCGGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 53
Protein sequence:
>54_residues MSLGTIILIILIIALLGGFTGIGGGPFYGTGYYGGGGLGLVVVILLILLLLGKL
Sequences:
>Translated_54_residues MSLGTIILIILIIALLGGFTGIGGGPFYGTGYYGGGGLGLVVVILLILLLLGKL >Mature_53_residues SLGTIILIILIIALLGGFTGIGGGPFYGTGYYGGGGLGLVVVILLILLLLGKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5376; Mature: 5245
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGTIILIILIIALLGGFTGIGGGPFYGTGYYGGGGLGLVVVILLILLLLGKL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLGTIILIILIIALLGGFTGIGGGPFYGTGYYGGGGLGLVVVILLILLLLGKL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA