Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750060

Identifier: 86750060

GI number: 86750060

Start: 3355889

End: 3356347

Strand: Reverse

Name: 86750060

Synonym: RPB_2943

Alternate gene names: NA

Gene position: 3356347-3355889 (Counterclockwise)

Preceding gene: 86750061

Following gene: 86750059

Centisome position: 62.95

GC content: 64.71

Gene sequence:

>459_bases
ATGCGAAGAACCATCACATCATTGGCGGTCGCTGCTGTGTTGATCGGGTCGGCGACAATCGGGCCCGCGATGGCGCGGGA
TCGATCCGACCGTGTGGAATTGACTGCGAGCCAGCTCGCGGATCACGCCGCGGCCCGTGCCGCCCAGCTCAAGGCGGACC
TTCGGTTGACGCCCGAACAGGACAAGAACTGGTCGGGCGTCCAGGCCGAACTGGTCAATGTCTGGAGGAAGCAGGGCGAA
CAGCGCCAATCGTGGCGGAATGCGCGCGCCAACCAGGCGAGCAACGTCGACCTGATCGAGCAGATGCGCAAGGACGGCGA
CTCTCGGATCGAACACGGCAACGATCTGAAGAAGCTCGCCGACGCGGCTCAGCCTCTCTACGCATCGCTCGACGATCGGC
AGAAGCGGCGCTTCGGCGAGGCGCTGTTTCAGCGCTCGCGTGATCGCCGCTCGGACTAG

Upstream 100 bases:

>100_bases
GGCGGCGGCGGTCTCGGCCTTGTGGTCGTCATTCTGCTGATTCTGCTGTTGCTCGGAAAGCTATGAACGCAGGAACTCAA
CTCCGGAAAAGGACGATATC

Downstream 100 bases:

>100_bases
AGCGCAGGATTTCCCACGAGCAGTTTCGCAAGAGCGGGCTTGCCCTCCGGGCGGCCCGCAAATCTTGCATTTGGCGATGG
CGATCGAGGCGAACCATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRRTITSLAVAAVLIGSATIGPAMARDRSDRVELTASQLADHAAARAAQLKADLRLTPEQDKNWSGVQAELVNVWRKQGE
QRQSWRNARANQASNVDLIEQMRKDGDSRIEHGNDLKKLADAAQPLYASLDDRQKRRFGEALFQRSRDRRSD

Sequences:

>Translated_152_residues
MRRTITSLAVAAVLIGSATIGPAMARDRSDRVELTASQLADHAAARAAQLKADLRLTPEQDKNWSGVQAELVNVWRKQGE
QRQSWRNARANQASNVDLIEQMRKDGDSRIEHGNDLKKLADAAQPLYASLDDRQKRRFGEALFQRSRDRRSD
>Mature_152_residues
MRRTITSLAVAAVLIGSATIGPAMARDRSDRVELTASQLADHAAARAAQLKADLRLTPEQDKNWSGVQAELVNVWRKQGE
QRQSWRNARANQASNVDLIEQMRKDGDSRIEHGNDLKKLADAAQPLYASLDDRQKRRFGEALFQRSRDRRSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17093; Mature: 17093

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTITSLAVAAVLIGSATIGPAMARDRSDRVELTASQLADHAAARAAQLKADLRLTPEQ
CCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DKNWSGVQAELVNVWRKQGEQRQSWRNARANQASNVDLIEQMRKDGDSRIEHGNDLKKLA
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHH
DAAQPLYASLDDRQKRRFGEALFQRSRDRRSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRTITSLAVAAVLIGSATIGPAMARDRSDRVELTASQLADHAAARAAQLKADLRLTPEQ
CCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DKNWSGVQAELVNVWRKQGEQRQSWRNARANQASNVDLIEQMRKDGDSRIEHGNDLKKLA
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHH
DAAQPLYASLDDRQKRRFGEALFQRSRDRRSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA