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The map label for this gene is yjjP [H]

Identifier: 86750044

GI number: 86750044

Start: 3340302

End: 3341105

Strand: Reverse

Name: yjjP [H]

Synonym: RPB_2927

Alternate gene names: 86750044

Gene position: 3341105-3340302 (Counterclockwise)

Preceding gene: 86750046

Following gene: 86750043

Centisome position: 62.67

GC content: 69.78

Gene sequence:

>804_bases
ATGGAAACCCATTCGGATACCGCTGACGGAGATCGTCTGCATCACCACGCGCTCGACCGCATCGCGCATGCGACGTTGCG
CGCCGGCGCCATCCTGGCGCAGAGCGGCGCCTCCGTCCGCGTCGTGCATGAAGGCGCGCGGATGATCGCCGGCGGGCTCG
GCGTTGAGGTGCTGGGGATACGATCCGGCTATGCCTCGTTCGAGATCACGCTGGAACGCGACCGCCATACCATCACCCGC
ATGACGCAGATCGGCCCCCACGGCGTCAATCACCGGCTCGACTTCGCGGTGCGCGATCTGGTGCTGCGCGTCTCGCGCGG
GGGAATGTCCCCGGAGGAGATCGAAAGCGAGCTCGACCGGCTGCTGCGCGACACCCCACGGCATCCGCCGTGGCTGGTGG
CGATCGCCACCGGCGCCGCCTGCGCGGCGTTCGGCCGGCTGCTCGGCGCCGACTGGCTGTCGTTCGGGCCGATGCTGGCG
GCGGCAGGGATCGGCCAGCGGCTCCGGCATGCGCTGCTCGGGCGCCATGTCAACGTGTTCGTGGTCGCCGCGATCATCGG
TTGCGTCGCCGCGACCCTCGGCGGCCTCGGCGCGCGTCTGGCCGGCAGCAGCACGGTCGAGCTGGCGATGATGGCCTCGA
TCCTGCTGCTGGTGCCGGGCGTGCCATCGACCAACGCGCAGACCGACGTGCTCGACGGCTACCCGACGATGGGCAGCGCC
CGCGCGGTCTGGGTGGTGATGATCATGGTGTTTGCGGTCACCGGGCTGTGGATCGCCGAATTCGTATTGAGGGTGCCGGT
GTGA

Upstream 100 bases:

>100_bases
TCGTCCGAATATCGTGCGTCAGGCGCGGAATCGCCACGAAGTTTGCGGATCGCCGAGGTTCGAACGTCCCTTTCACGGGC
CTGATAACTGAAATCGCAAG

Downstream 100 bases:

>100_bases
GCAATGAACTGATCGCCATGCTTGCTCACCTCGCGCATCAGGCCGCGTTCGGCGCTGTCGCTGCCGCCGGCTTCGGCGTG
CTGTTCAATTTCGGCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
METHSDTADGDRLHHHALDRIAHATLRAGAILAQSGASVRVVHEGARMIAGGLGVEVLGIRSGYASFEITLERDRHTITR
MTQIGPHGVNHRLDFAVRDLVLRVSRGGMSPEEIESELDRLLRDTPRHPPWLVAIATGAACAAFGRLLGADWLSFGPMLA
AAGIGQRLRHALLGRHVNVFVVAAIIGCVAATLGGLGARLAGSSTVELAMMASILLLVPGVPSTNAQTDVLDGYPTMGSA
RAVWVVMIMVFAVTGLWIAEFVLRVPV

Sequences:

>Translated_267_residues
METHSDTADGDRLHHHALDRIAHATLRAGAILAQSGASVRVVHEGARMIAGGLGVEVLGIRSGYASFEITLERDRHTITR
MTQIGPHGVNHRLDFAVRDLVLRVSRGGMSPEEIESELDRLLRDTPRHPPWLVAIATGAACAAFGRLLGADWLSFGPMLA
AAGIGQRLRHALLGRHVNVFVVAAIIGCVAATLGGLGARLAGSSTVELAMMASILLLVPGVPSTNAQTDVLDGYPTMGSA
RAVWVVMIMVFAVTGLWIAEFVLRVPV
>Mature_267_residues
METHSDTADGDRLHHHALDRIAHATLRAGAILAQSGASVRVVHEGARMIAGGLGVEVLGIRSGYASFEITLERDRHTITR
MTQIGPHGVNHRLDFAVRDLVLRVSRGGMSPEEIESELDRLLRDTPRHPPWLVAIATGAACAAFGRLLGADWLSFGPMLA
AAGIGQRLRHALLGRHVNVFVVAAIIGCVAATLGGLGARLAGSSTVELAMMASILLLVPGVPSTNAQTDVLDGYPTMGSA
RAVWVVMIMVFAVTGLWIAEFVLRVPV

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=219, Percent_Identity=28.310502283105, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 28334; Mature: 28334

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METHSDTADGDRLHHHALDRIAHATLRAGAILAQSGASVRVVHEGARMIAGGLGVEVLGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHCCCCEEEEEE
RSGYASFEITLERDRHTITRMTQIGPHGVNHRLDFAVRDLVLRVSRGGMSPEEIESELDR
ECCCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLRDTPRHPPWLVAIATGAACAAFGRLLGADWLSFGPMLAAAGIGQRLRHALLGRHVNVF
HHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VVAAIIGCVAATLGGLGARLAGSSTVELAMMASILLLVPGVPSTNAQTDVLDGYPTMGSA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
RAVWVVMIMVFAVTGLWIAEFVLRVPV
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METHSDTADGDRLHHHALDRIAHATLRAGAILAQSGASVRVVHEGARMIAGGLGVEVLGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHCCCCEEEEEE
RSGYASFEITLERDRHTITRMTQIGPHGVNHRLDFAVRDLVLRVSRGGMSPEEIESELDR
ECCCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLRDTPRHPPWLVAIATGAACAAFGRLLGADWLSFGPMLAAAGIGQRLRHALLGRHVNVF
HHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VVAAIIGCVAATLGGLGARLAGSSTVELAMMASILLLVPGVPSTNAQTDVLDGYPTMGSA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
RAVWVVMIMVFAVTGLWIAEFVLRVPV
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]