Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750010

Identifier: 86750010

GI number: 86750010

Start: 3294334

End: 3295164

Strand: Reverse

Name: 86750010

Synonym: RPB_2893

Alternate gene names: NA

Gene position: 3295164-3294334 (Counterclockwise)

Preceding gene: 86750011

Following gene: 86750009

Centisome position: 61.8

GC content: 71.6

Gene sequence:

>831_bases
ATGACGCAGCCTGCAAGGGCCCAAGAGCCTTCCATGGAGGAGATTCTGGCGTCGATCCGTCGTATCATCGCGGACGATGA
AGCCAAGCCCGCGACCGCGGCCAAACCGCCGGTCGCCGCCGCCCCGAAGCCGGAGCCGCCGAAACCGGTTCCAACGCCGA
GCAAGCCCGCGGCCATGACCCCACCTCCGCCCGCCCCGAGCCCGGCCCCGCAGGCCGCAGCCCCCAAGCCAGTCGCGCCG
CCGAAACCGGCGCCTGCGCCACCGCCGCCCGCGCCGGCCGCGGCGGAGGCCAGCAACAATCAGGACGACATCGACGCGCT
GCTGGCGGGGCTCGATGCCTCGACCACCGAGGAAGAGGTGCGGCCGCCGCAGCCCGACGGCGACGTGCTCGAACTGACCG
ACGAGATGGCCCTGCCGGAGCCTGAGCCGGAGCCGGAGCCGGAGCCTGCTCCGACGCCGACCCCGCTGCCGCAGGCGTCG
TACCGCAAGCCGGTCGAAGACGATCTCGAATTCGCCGAAGCCGCGGCGCCCAGGCCGGCGGCGCCGGAGCCGAAGCCGGC
GATGCCGGAGCCCGCCTACCAGCCGTCGACATCCTCCTGGTCCGAGGATCCGCCGCAGGCGCCGATCATGTCGCGCGCCA
CGGTGTCGGCCGTGGAATCGGCGTTCAATTCGCTCGCCAACACGGTGCTCAGCAACAACGCGCGCACCCTCGAGGATCTC
GTCAAGGAGATGCTCCGGCCGATGCTGAAATCCTGGCTCGACGACAATCTGCCGACCCTGGTCGAGCGGATCGTGCGCCA
GGAAATCGAGCGGGTGTCGCGCGGCCGCTAG

Upstream 100 bases:

>100_bases
CGTTCGCTGATGAAAGTCGGCCGCGCCGATCCGGAACCGGGCCGTCCCGCAGAGCTTTGGTGTACAACGCCGACAAGGGC
GTGATGATGTGGAGTCGGAG

Downstream 100 bases:

>100_bases
GCGAGGGCGCTCCGCTGCGGGGCGCCGGTTCGAATTGCTGGTCTTCCCCATGTTGACTTGCGGCGCGCCGGCGGGTTTCT
AGCCGCGTACCGGATGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMTPPPPAPSPAPQAAAPKPVAP
PKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEVRPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQAS
YRKPVEDDLEFAEAAAPRPAAPEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL
VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR

Sequences:

>Translated_276_residues
MTQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMTPPPPAPSPAPQAAAPKPVAP
PKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEVRPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQAS
YRKPVEDDLEFAEAAAPRPAAPEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL
VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR
>Mature_275_residues
TQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMTPPPPAPSPAPQAAAPKPVAPP
KPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEVRPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQASY
RKPVEDDLEFAEAAAPRPAAPEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDLV
KEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR

Specific function: Unknown

COG id: COG3827

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29238; Mature: 29107

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMT
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPPAPSPAPQAAAPKPVAPPKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHC
RPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQASYRKPVEDDLEFAEAAAPRPA
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCC
APEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMT
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPPAPSPAPQAAAPKPVAPPKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHC
RPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQASYRKPVEDDLEFAEAAAPRPA
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCC
APEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA