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The map label for this gene is bepC [H]

Identifier: 86750011

GI number: 86750011

Start: 3295455

End: 3296837

Strand: Reverse

Name: bepC [H]

Synonym: RPB_2894

Alternate gene names: 86750011

Gene position: 3296837-3295455 (Counterclockwise)

Preceding gene: 86750012

Following gene: 86750010

Centisome position: 61.84

GC content: 65.51

Gene sequence:

>1383_bases
GTGAAGCGGTTATCCGGTCTTATGACTGCCGGCGTCGTTCTGGCGTGTTTGGGTCCGGCCCCTGTGCTGGCCGAAACGAT
CGAGGCTGCCTTGATCCGCGCCTACCAGACCAACCCCCAGCTCAATGCCCAACGCGCCTCGGTGCGCTCGACCGACGAAT
CGGTTCCGCAGGCGCTGTCGGGCTATCGTCCCAAGGTTTCGGTGACGGCGAGCGGCGGCTATCAATACACCGACGTCGCC
GGCGTCCAACTCGGCAACCGGTATCAGCTCAACGGCACGCAGGTTCCGCGGTCGGTCGGCATCACCGCGACGCAGACGCT
GTTCAACGGCAACCAGACCGCCAACCGCACTCGCGCGGCCGAGGGCCAGGTCTCATCGGCGCGCGAGGGACTTCGCGTGC
TGGAACAATCCGTGCTGCTGTCGGCCGCGACCATCTACATGGACTATCTGCGCGACGCGGCGACGGTCGAGGTGCAGAAG
TCCAACGTCCGCGTGCTCGACCAGACGCTGAAGCAGACCAACGACCGCTTCAATGTCGGCGAGGTCACCCGTACCGACGT
CGCGCAATCGCAGGCGCAGCTTGCGGCCGGTAACACCCAGTTGCTCACCGCCGAATCCAATCTCACGACCACCCGCGCGA
ATTACCGCCGGATCATCGGCAGCGAGCCGACCGGGCTGGCGCCGGGATCGCCCGTCGATCGCTTCCTGCCGGCAACGCTG
GCGAAGGCGGTCGAACTCGGCATGGTCGAGAATCCGAACGTCACCTCGGCGATGTACGGGGTCGACGTCAATTATCTCAA
CGTGAAGATCAACGAAGGCGCGCTGTTCCCGACCGTCACTCTGCAGGCGAACGCGCAGCAATCATGGGAATCGTCGATCA
CGACGAGCAAGCAGTTCGTCGCCGGGGCGACCGCCCAAGTGTCGATTCCGATCTATCAGGGTGGCTCCGAATATTCGCTG
ATCAGGCAATCGAAGGAATCGCTGGCGCAGCAGCGTCTCTATCTCGAGCAGGTGCGCGACCAGACCCGCGCGACCATCGT
GCAGGCCTGGGGCCAGCTCGAAGCGGGCCGGGCCCAGGTCGCCTCGGCACAGTCCCAGGTCAAGGCATCGGAGATCGCGC
TTAACGGCGTGCGCGAAGAGGCGCGGGCCGGCCAGCGCACCACGCTCGACGTCCTCAACGCGCAGCAGGCGCTGGTCAAT
GCGCGGGTGTCGCTGGTGACGGCGCAGCATGATCGCGTGGTGGCGTCGTATTCGGTGCTGAGTGCGATCGGGCGGCTGGC
GCCGCAGGTGCTCGGCCTGAAGACCGATGTCTACGATCCGAGTGTGCACTACCATCAGGTCCGCGATTCCTGGGTCGGCG
TTCGGACGCCCGACGGTCGCTGA

Upstream 100 bases:

>100_bases
TGTTCGGCGGGACTTGCGGCGGCTGAATGCCGGCGTGATACGCAGGGTTGCTCGCCCCGCGGTAATGAACTGCAAGATTG
GATTGCCTGGGATGAATGGG

Downstream 100 bases:

>100_bases
TCTCGTCCCGGACGGCGCGCCGTTTCGGCGCGCGTCGTCTCCCTTGCTTGCAAACAATTCGTCGCGTGCCGTAGCGTAGT
CGGTATGGTCGGAGGCGATT

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKRLSGLMTAGVVLACLGPAPVLAETIEAALIRAYQTNPQLNAQRASVRSTDESVPQALSGYRPKVSVTASGGYQYTDVA
GVQLGNRYQLNGTQVPRSVGITATQTLFNGNQTANRTRAAEGQVSSAREGLRVLEQSVLLSAATIYMDYLRDAATVEVQK
SNVRVLDQTLKQTNDRFNVGEVTRTDVAQSQAQLAAGNTQLLTAESNLTTTRANYRRIIGSEPTGLAPGSPVDRFLPATL
AKAVELGMVENPNVTSAMYGVDVNYLNVKINEGALFPTVTLQANAQQSWESSITTSKQFVAGATAQVSIPIYQGGSEYSL
IRQSKESLAQQRLYLEQVRDQTRATIVQAWGQLEAGRAQVASAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQALVN
ARVSLVTAQHDRVVASYSVLSAIGRLAPQVLGLKTDVYDPSVHYHQVRDSWVGVRTPDGR

Sequences:

>Translated_460_residues
MKRLSGLMTAGVVLACLGPAPVLAETIEAALIRAYQTNPQLNAQRASVRSTDESVPQALSGYRPKVSVTASGGYQYTDVA
GVQLGNRYQLNGTQVPRSVGITATQTLFNGNQTANRTRAAEGQVSSAREGLRVLEQSVLLSAATIYMDYLRDAATVEVQK
SNVRVLDQTLKQTNDRFNVGEVTRTDVAQSQAQLAAGNTQLLTAESNLTTTRANYRRIIGSEPTGLAPGSPVDRFLPATL
AKAVELGMVENPNVTSAMYGVDVNYLNVKINEGALFPTVTLQANAQQSWESSITTSKQFVAGATAQVSIPIYQGGSEYSL
IRQSKESLAQQRLYLEQVRDQTRATIVQAWGQLEAGRAQVASAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQALVN
ARVSLVTAQHDRVVASYSVLSAIGRLAPQVLGLKTDVYDPSVHYHQVRDSWVGVRTPDGR
>Mature_460_residues
MKRLSGLMTAGVVLACLGPAPVLAETIEAALIRAYQTNPQLNAQRASVRSTDESVPQALSGYRPKVSVTASGGYQYTDVA
GVQLGNRYQLNGTQVPRSVGITATQTLFNGNQTANRTRAAEGQVSSAREGLRVLEQSVLLSAATIYMDYLRDAATVEVQK
SNVRVLDQTLKQTNDRFNVGEVTRTDVAQSQAQLAAGNTQLLTAESNLTTTRANYRRIIGSEPTGLAPGSPVDRFLPATL
AKAVELGMVENPNVTSAMYGVDVNYLNVKINEGALFPTVTLQANAQQSWESSITTSKQFVAGATAQVSIPIYQGGSEYSL
IRQSKESLAQQRLYLEQVRDQTRATIVQAWGQLEAGRAQVASAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQALVN
ARVSLVTAQHDRVVASYSVLSAIGRLAPQVLGLKTDVYDPSVHYHQVRDSWVGVRTPDGR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=436, Percent_Identity=24.5412844036697, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49491; Mature: 49491

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSGLMTAGVVLACLGPAPVLAETIEAALIRAYQTNPQLNAQRASVRSTDESVPQALS
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
GYRPKVSVTASGGYQYTDVAGVQLGNRYQLNGTQVPRSVGITATQTLFNGNQTANRTRAA
CCCCEEEEEECCCEEEEEECCEEECCEEEECCCCCCCCCCCEEEHHEECCCCCCCHHHCC
EGQVSSAREGLRVLEQSVLLSAATIYMDYLRDAATVEVQKSNVRVLDQTLKQTNDRFNVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCC
EVTRTDVAQSQAQLAAGNTQLLTAESNLTTTRANYRRIIGSEPTGLAPGSPVDRFLPATL
CCHHHHHHHHHHHHHCCCEEEEEECCCCEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AKAVELGMVENPNVTSAMYGVDVNYLNVKINEGALFPTVTLQANAQQSWESSITTSKQFV
HHHHHHCCCCCCCCCCEEEECEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCHHHH
AGATAQVSIPIYQGGSEYSLIRQSKESLAQQRLYLEQVRDQTRATIVQAWGQLEAGRAQV
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ASAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQALVNARVSLVTAQHDRVVASYSVL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH
SAIGRLAPQVLGLKTDVYDPSVHYHQVRDSWVGVRTPDGR
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRLSGLMTAGVVLACLGPAPVLAETIEAALIRAYQTNPQLNAQRASVRSTDESVPQALS
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
GYRPKVSVTASGGYQYTDVAGVQLGNRYQLNGTQVPRSVGITATQTLFNGNQTANRTRAA
CCCCEEEEEECCCEEEEEECCEEECCEEEECCCCCCCCCCCEEEHHEECCCCCCCHHHCC
EGQVSSAREGLRVLEQSVLLSAATIYMDYLRDAATVEVQKSNVRVLDQTLKQTNDRFNVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCC
EVTRTDVAQSQAQLAAGNTQLLTAESNLTTTRANYRRIIGSEPTGLAPGSPVDRFLPATL
CCHHHHHHHHHHHHHCCCEEEEEECCCCEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AKAVELGMVENPNVTSAMYGVDVNYLNVKINEGALFPTVTLQANAQQSWESSITTSKQFV
HHHHHHCCCCCCCCCCEEEECEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCHHHH
AGATAQVSIPIYQGGSEYSLIRQSKESLAQQRLYLEQVRDQTRATIVQAWGQLEAGRAQV
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ASAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQALVNARVSLVTAQHDRVVASYSVL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH
SAIGRLAPQVLGLKTDVYDPSVHYHQVRDSWVGVRTPDGR
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]