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The map label for this gene is 86749963

Identifier: 86749963

GI number: 86749963

Start: 3239507

End: 3240298

Strand: Reverse

Name: 86749963

Synonym: RPB_2846

Alternate gene names: NA

Gene position: 3240298-3239507 (Counterclockwise)

Preceding gene: 86749967

Following gene: 86749961

Centisome position: 60.77

GC content: 67.93

Gene sequence:

>792_bases
ATGAAGTCTTGCAACTTGGTCGCGACGGCCGGGCCGCGCGGGCGGGCATTCGTTCTGCTCACGGCGGCGGCTGTGGCCGC
CCTGACCGTCGCGTCCGCAGCGCAAGCGCAGGCCCCGCAGCAGCAGCCGGCCGCCCCGAAGGCGGCTCCGGCGCCGAAGG
CTCCCCCGAAAGCGGCGCCGAAGGCCGGGCCCGCCGCGCAGGCGCCCGCCGCTGCGCCGCAGCAGGAGCAGCAGCAGGTT
CAGCTGATCTATGCGCCGTGGACCAAATTCTGCCTCAAGGGCCAGGACGCCAACGCCAAGCAGGTCTGCTTCACCGGCAA
GGACGGCCGCATCGAGTCCGGCCAGCCGGTGATCGCGGCGGTGATCATCGAGCCGGAAGGCGAGCCGAAGAAGATCTTGC
GCGTCACGCTGCCGCTCGGCATGCAGCTCGTTCACGGCACCCGCATCATCGTCGACAGCAACGCGCCGCAGCAGAGCCCT
TATGTGATCTGCTTCGCCAACGGCTGCATGTCCGATTACGAAGCGACCCCGGAACTGCTCGCCAGCATGAAGAAGGGCCA
GAATCTGGTCGTCCAGGCGATCAATTCCAACGGCGCACCGCTGACGCTGCCGCTGCCGCTGCAGGAGACCGGCGGATCGT
TCGCCAAGGCCTATGACGGCCCGCCGACCGACCCGAAGCAGTTCGAGGAAACCCAGAAGAAGCTGCAGGAAGAACTGCAG
AAGCGTGCCGAAGAACAGCGCAAGAAGCTCGAGGCCCAGGCCCCGGCGGGCGCCAATCCGGCAGCGAAGTAA

Upstream 100 bases:

>100_bases
TAACTGCCTCAATTGGCACCGAGAGACCGGCCAAACGGCCAGATGTCAGCTCCGCGCGTCGCGGTGGGGTGTGCGACCGT
TTCAGAAAGGGTTTTCCGCA

Downstream 100 bases:

>100_bases
CGTCCGATATTCCGCTGAACGAAAAGGGCGCCCCGGTGGGCGCCCTTTGTCTATCGACCGTTTGTGGCGAGCGTTCCTGA
GCCGTCGATGGACGACGCGG

Product: invasion associated locus B

Products: NA

Alternate protein names: Invasion Associated Locus B; Signal Peptide; Invasion Associated Locus B Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKSCNLVATAGPRGRAFVLLTAAAVAALTVASAAQAQAPQQQPAAPKAAPAPKAPPKAAPKAGPAAQAPAAAPQQEQQQV
QLIYAPWTKFCLKGQDANAKQVCFTGKDGRIESGQPVIAAVIIEPEGEPKKILRVTLPLGMQLVHGTRIIVDSNAPQQSP
YVICFANGCMSDYEATPELLASMKKGQNLVVQAINSNGAPLTLPLPLQETGGSFAKAYDGPPTDPKQFEETQKKLQEELQ
KRAEEQRKKLEAQAPAGANPAAK

Sequences:

>Translated_263_residues
MKSCNLVATAGPRGRAFVLLTAAAVAALTVASAAQAQAPQQQPAAPKAAPAPKAPPKAAPKAGPAAQAPAAAPQQEQQQV
QLIYAPWTKFCLKGQDANAKQVCFTGKDGRIESGQPVIAAVIIEPEGEPKKILRVTLPLGMQLVHGTRIIVDSNAPQQSP
YVICFANGCMSDYEATPELLASMKKGQNLVVQAINSNGAPLTLPLPLQETGGSFAKAYDGPPTDPKQFEETQKKLQEELQ
KRAEEQRKKLEAQAPAGANPAAK
>Mature_263_residues
MKSCNLVATAGPRGRAFVLLTAAAVAALTVASAAQAQAPQQQPAAPKAAPAPKAPPKAAPKAGPAAQAPAAAPQQEQQQV
QLIYAPWTKFCLKGQDANAKQVCFTGKDGRIESGQPVIAAVIIEPEGEPKKILRVTLPLGMQLVHGTRIIVDSNAPQQSP
YVICFANGCMSDYEATPELLASMKKGQNLVVQAINSNGAPLTLPLPLQETGGSFAKAYDGPPTDPKQFEETQKKLQEELQ
KRAEEQRKKLEAQAPAGANPAAK

Specific function: Unknown

COG id: COG5342

COG function: function code R; Invasion protein B, involved in pathogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27583; Mature: 27583

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSCNLVATAGPRGRAFVLLTAAAVAALTVASAAQAQAPQQQPAAPKAAPAPKAPPKAAP
CCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
KAGPAAQAPAAAPQQEQQQVQLIYAPWTKFCLKGQDANAKQVCFTGKDGRIESGQPVIAA
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEE
VIIEPEGEPKKILRVTLPLGMQLVHGTRIIVDSNAPQQSPYVICFANGCMSDYEATPELL
EEECCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHH
ASMKKGQNLVVQAINSNGAPLTLPLPLQETGGSFAKAYDGPPTDPKQFEETQKKLQEELQ
HHHHCCCEEEEEEECCCCCEEEEECCHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
KRAEEQRKKLEAQAPAGANPAAK
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKSCNLVATAGPRGRAFVLLTAAAVAALTVASAAQAQAPQQQPAAPKAAPAPKAPPKAAP
CCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
KAGPAAQAPAAAPQQEQQQVQLIYAPWTKFCLKGQDANAKQVCFTGKDGRIESGQPVIAA
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEE
VIIEPEGEPKKILRVTLPLGMQLVHGTRIIVDSNAPQQSPYVICFANGCMSDYEATPELL
EEECCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHH
ASMKKGQNLVVQAINSNGAPLTLPLPLQETGGSFAKAYDGPPTDPKQFEETQKKLQEELQ
HHHHCCCEEEEEEECCCCCEEEEECCHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
KRAEEQRKKLEAQAPAGANPAAK
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA