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The map label for this gene is yaeL [C]

Identifier: 86749938

GI number: 86749938

Start: 3215528

End: 3216679

Strand: Reverse

Name: yaeL [C]

Synonym: RPB_2821

Alternate gene names: 86749938

Gene position: 3216679-3215528 (Counterclockwise)

Preceding gene: 86749939

Following gene: 86749937

Centisome position: 60.33

GC content: 61.81

Gene sequence:

>1152_bases
ATGGCCGATCTTTTTATGAACGGGTTCAACACGTTGAGCCACGGAATCGTGGGTTACGTGGTGCCGTTTCTGTTCGTGCT
GACGATCGTGGTGTTCTTCCACGAACTCGGCCATTTTCTGGTCGCACGCTGGAACGGTGTCAGGGTGTTGACCTTCTCGT
TGGGCTTCGGCCCGGAGATCGCCGGCTTTAACGATCGCCATGGAACCCGCTGGAAGCTCTCGGCGATCCCGCTCGGCGGC
TACGTCAAGTTCTTCGGTGACGAGAGCGAGGCGAGCACGCCGTCGACCGATTCACTGTCGAAGATGAGCGCGGAGGAGCG
CTCGGTCAGCTTTCACCATAAGAAAGTCGGCCCGCGTGCGGCGATCGTCGTCGCCGGTCCGTTGGCCAATTTCATTCTCG
CGATCGTGCTGTTCACCTTTCTGTTCTCGGTGTTCGGCGTTCCGAGCACCTCGGCCCGGGTCGACAACATTCAGCCGGGC
AGCGCCGCCGAAGCGGGCGGCTTCAAGCCGGGCGACATCGTCGTCGCCATCGACGGAAGCCCGATTCAGAACTTTCAGGA
GATGCAGCGCACCGTCAGCCGGGAGGCTGGACGGCAGTTGGACTTCACGGTCAAGCGTGGAACTGAGACCGTCGATCTGA
AGGCGACGCCGGAACTTCGCGAGATCAAGGATCGGTTCGGCAATGCCCAGCGCCTCGGCATTCTGGGAATCAGCCGCTCC
ACTTCCGCCAACGAGGTCACCACGGAGCGCTTGAATCCGGCCGCCGCGGCCTGGATGGGGGTCAAGGAGACCTGGTTCGT
CGTCGATCGGACCTTCGCCTATATCGGCGGCCTGTTCGCCGGCCGGGAAGCTGCCGACCAGCTCGGCGGTCCGTTGCGAA
TCGCACAGATCTCTGGACAGGTCGCGACCATCGGCTTTACCCCGCTGCTCCATCTGGCGGCGGTGCTGTCGATTTCGATC
GGGTTGCTCAACCTGTTTCCGGTCCCGCTGCTCGATGGTGGGCACCTGATGTTCTATGCCATCGAAGCCGTCCGCGGGCG
TCCGCTGTCGGAGCGGGCGCAGGAAATGGGCTTTCGGATCGGGCTCGGACTGGTGCTGATGTTGATGGTTTTCGCGACAT
ACAACGATATCCTGCACTTGGCTTCGTCGTAA

Upstream 100 bases:

>100_bases
ACGCGCGAAAAATGGCTGCCACCCTATTGCCTCAAATTGCCGCAAAGGCATCCTAGAGCATTGGGGAACAGGGCCGTCGG
TTCTGCTTGAGAGGAATGGG

Downstream 100 bases:

>100_bases
TCGGAAACCGAACGTGGCCGATGGGCAACGTGTTGGAACGAAATTGAAATCGCACTGCGAATGGACGTTTGCCGGCTCGG
CAAAATTGTCTACAAGCAAG

Product: peptidase M50, putative membrane-associated zinc metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MADLFMNGFNTLSHGIVGYVVPFLFVLTIVVFFHELGHFLVARWNGVRVLTFSLGFGPEIAGFNDRHGTRWKLSAIPLGG
YVKFFGDESEASTPSTDSLSKMSAEERSVSFHHKKVGPRAAIVVAGPLANFILAIVLFTFLFSVFGVPSTSARVDNIQPG
SAAEAGGFKPGDIVVAIDGSPIQNFQEMQRTVSREAGRQLDFTVKRGTETVDLKATPELREIKDRFGNAQRLGILGISRS
TSANEVTTERLNPAAAAWMGVKETWFVVDRTFAYIGGLFAGREAADQLGGPLRIAQISGQVATIGFTPLLHLAAVLSISI
GLLNLFPVPLLDGGHLMFYAIEAVRGRPLSERAQEMGFRIGLGLVLMLMVFATYNDILHLASS

Sequences:

>Translated_383_residues
MADLFMNGFNTLSHGIVGYVVPFLFVLTIVVFFHELGHFLVARWNGVRVLTFSLGFGPEIAGFNDRHGTRWKLSAIPLGG
YVKFFGDESEASTPSTDSLSKMSAEERSVSFHHKKVGPRAAIVVAGPLANFILAIVLFTFLFSVFGVPSTSARVDNIQPG
SAAEAGGFKPGDIVVAIDGSPIQNFQEMQRTVSREAGRQLDFTVKRGTETVDLKATPELREIKDRFGNAQRLGILGISRS
TSANEVTTERLNPAAAAWMGVKETWFVVDRTFAYIGGLFAGREAADQLGGPLRIAQISGQVATIGFTPLLHLAAVLSISI
GLLNLFPVPLLDGGHLMFYAIEAVRGRPLSERAQEMGFRIGLGLVLMLMVFATYNDILHLASS
>Mature_382_residues
ADLFMNGFNTLSHGIVGYVVPFLFVLTIVVFFHELGHFLVARWNGVRVLTFSLGFGPEIAGFNDRHGTRWKLSAIPLGGY
VKFFGDESEASTPSTDSLSKMSAEERSVSFHHKKVGPRAAIVVAGPLANFILAIVLFTFLFSVFGVPSTSARVDNIQPGS
AAEAGGFKPGDIVVAIDGSPIQNFQEMQRTVSREAGRQLDFTVKRGTETVDLKATPELREIKDRFGNAQRLGILGISRST
SANEVTTERLNPAAAAWMGVKETWFVVDRTFAYIGGLFAGREAADQLGGPLRIAQISGQVATIGFTPLLHLAAVLSISIG
LLNLFPVPLLDGGHLMFYAIEAVRGRPLSERAQEMGFRIGLGLVLMLMVFATYNDILHLASS

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=236, Percent_Identity=32.6271186440678, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 41462; Mature: 41331

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLFMNGFNTLSHGIVGYVVPFLFVLTIVVFFHELGHFLVARWNGVRVLTFSLGFGPEI
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCC
AGFNDRHGTRWKLSAIPLGGYVKFFGDESEASTPSTDSLSKMSAEERSVSFHHKKVGPRA
CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
AIVVAGPLANFILAIVLFTFLFSVFGVPSTSARVDNIQPGSAAEAGGFKPGDIVVAIDGS
EEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PIQNFQEMQRTVSREAGRQLDFTVKRGTETVDLKATPELREIKDRFGNAQRLGILGISRS
CHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCC
TSANEVTTERLNPAAAAWMGVKETWFVVDRTFAYIGGLFAGREAADQLGGPLRIAQISGQ
CCCCHHHHHHCCHHHHHHHCCCHHEEHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCC
VATIGFTPLLHLAAVLSISIGLLNLFPVPLLDGGHLMFYAIEAVRGRPLSERAQEMGFRI
EEEECHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEHHHHCCCHHHHHHHCCHHH
GLGLVLMLMVFATYNDILHLASS
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADLFMNGFNTLSHGIVGYVVPFLFVLTIVVFFHELGHFLVARWNGVRVLTFSLGFGPEI
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCC
AGFNDRHGTRWKLSAIPLGGYVKFFGDESEASTPSTDSLSKMSAEERSVSFHHKKVGPRA
CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
AIVVAGPLANFILAIVLFTFLFSVFGVPSTSARVDNIQPGSAAEAGGFKPGDIVVAIDGS
EEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PIQNFQEMQRTVSREAGRQLDFTVKRGTETVDLKATPELREIKDRFGNAQRLGILGISRS
CHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCC
TSANEVTTERLNPAAAAWMGVKETWFVVDRTFAYIGGLFAGREAADQLGGPLRIAQISGQ
CCCCHHHHHHCCHHHHHHHCCCHHEEHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCC
VATIGFTPLLHLAAVLSISIGLLNLFPVPLLDGGHLMFYAIEAVRGRPLSERAQEMGFRI
EEEECHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEHHHHCCCHHHHHHHCCHHH
GLGLVLMLMVFATYNDILHLASS
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]