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The map label for this gene is ynfM [H]

Identifier: 86749900

GI number: 86749900

Start: 3173039

End: 3174268

Strand: Reverse

Name: ynfM [H]

Synonym: RPB_2783

Alternate gene names: 86749900

Gene position: 3174268-3173039 (Counterclockwise)

Preceding gene: 86749901

Following gene: 86749899

Centisome position: 59.54

GC content: 67.4

Gene sequence:

>1230_bases
ATGTCGCAGGGCGACAGTGCGGTCGTTCGGCCGAGCCTGCCGCCCGCGTTGAAGATCATTGCGCTGTCGGGCTTTGCCGC
TAGCCTGTCCGCCCGCGCGCTCGATCCGGTGCTGCCGCGGATCGCGTCGGAATTCTCGGTCTCGATCGCCACCGCCGCAG
GTCTCGCCGCCGTGACGGCCTTCACCTTCGCGGTGGTGCAGCCGGCCATCGGTGCGCTCGCCGACATGTTCGGCAAAGCT
CGACTGATGATCGTCTGCCTCGCATTGCTCGGCTTCGCGAGCCTGCTCGGCGCGGTGTCGTCGTCATTCGAGGTCCTGTT
TCTGTGCCGGATTCTCGCCGGCATCGGAGCCGGCGGCGTGTTCCCGGTGGCGCTGGGGCTCACGAGCGATCTGGTCGAAC
CTGGGCGGCGGCAGGTCGCGATCGGGCGCGTGCTCGGCGGCTCGATGACCGGCAATCTGCTCGGCGCCTCGGCCTCCGGC
GTGATCGGCGACGTGCTCGGCTGGCGCGGTGTGCTGGCCGTGCTCGGCGTCCTGGTGATCGTCGCTGCGTTGGCAGTGTC
GTTCGGCTTTCGCAATAAACCGATGCGTCCTGGCGCACCGATGGATCTGGCGGCCTTACGCCGCGGCTATCGGACCATCT
TCAGCAATCCGAATGCTCCGATCTGCTTCGCAGCAGTATTGGTCGAGGGGACCTGCGTGATGGGGGCGTTCCCCTTCGTC
GCCGCCTTCCTGCACGATCAGGGGCAGGAATCACTGGCGGTCGCCGGGCTGGTGATCGCGGGCTTTGCTGTCGGCGGGCT
GCTCTACACGCTGACCGTCGCACGACTGCTGCCACGGCTCGGCGTTCGGGGCATGATGATCGGTGGCGGCGCGCTGGTCG
GCCTGCAGTTGGCGATCATCGCGTTCGGGCCCCCGTGGCAGGCCCAGGCCGTGGCGTTCGTGGCGATGGGGATGGGCTTC
TACATGCTGCACGGCTGCGTGCAGGTGTTCGCCAGCGAGCTCAGTGAGACCGCGCGCGGCACCGCGATGTCGCTGCATTC
GTTCTTTTTCTTCCTCGGCCAGACGACCGGCCCGATCGCCTACGGCTTCGGCCTCGCTCATGCCGGTAAAGTTCCCACGA
TGCTGATTGCCGCCATCACGATGCTGGCGCTGGGGTTTATTCTTGCGGTGGTGTTGCGACCGCGACCGCCGACTGATGCG
GTCGAGAGCCCACGGCCGGATCCTGCGTGA

Upstream 100 bases:

>100_bases
GCCCCAATATGGTGCCGCTGCGCGACTTCGAGAGCCTGCTGCGCACGCTGATGGAGTTCGACGCGCTCGCCAAGCGGCGG
TCCGGAGCCGGAACGATCTG

Downstream 100 bases:

>100_bases
GGCATCCTGCCGGCTGTCGGGCCGGTGAGAATCACCGTTAGGATGGGTCAGCCAGAAGAGTTGCCGTCGAAATGGCGGTG
ACGTCATGCCTGGACCATTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSQGDSAVVRPSLPPALKIIALSGFAASLSARALDPVLPRIASEFSVSIATAAGLAAVTAFTFAVVQPAIGALADMFGKA
RLMIVCLALLGFASLLGAVSSSFEVLFLCRILAGIGAGGVFPVALGLTSDLVEPGRRQVAIGRVLGGSMTGNLLGASASG
VIGDVLGWRGVLAVLGVLVIVAALAVSFGFRNKPMRPGAPMDLAALRRGYRTIFSNPNAPICFAAVLVEGTCVMGAFPFV
AAFLHDQGQESLAVAGLVIAGFAVGGLLYTLTVARLLPRLGVRGMMIGGGALVGLQLAIIAFGPPWQAQAVAFVAMGMGF
YMLHGCVQVFASELSETARGTAMSLHSFFFFLGQTTGPIAYGFGLAHAGKVPTMLIAAITMLALGFILAVVLRPRPPTDA
VESPRPDPA

Sequences:

>Translated_409_residues
MSQGDSAVVRPSLPPALKIIALSGFAASLSARALDPVLPRIASEFSVSIATAAGLAAVTAFTFAVVQPAIGALADMFGKA
RLMIVCLALLGFASLLGAVSSSFEVLFLCRILAGIGAGGVFPVALGLTSDLVEPGRRQVAIGRVLGGSMTGNLLGASASG
VIGDVLGWRGVLAVLGVLVIVAALAVSFGFRNKPMRPGAPMDLAALRRGYRTIFSNPNAPICFAAVLVEGTCVMGAFPFV
AAFLHDQGQESLAVAGLVIAGFAVGGLLYTLTVARLLPRLGVRGMMIGGGALVGLQLAIIAFGPPWQAQAVAFVAMGMGF
YMLHGCVQVFASELSETARGTAMSLHSFFFFLGQTTGPIAYGFGLAHAGKVPTMLIAAITMLALGFILAVVLRPRPPTDA
VESPRPDPA
>Mature_408_residues
SQGDSAVVRPSLPPALKIIALSGFAASLSARALDPVLPRIASEFSVSIATAAGLAAVTAFTFAVVQPAIGALADMFGKAR
LMIVCLALLGFASLLGAVSSSFEVLFLCRILAGIGAGGVFPVALGLTSDLVEPGRRQVAIGRVLGGSMTGNLLGASASGV
IGDVLGWRGVLAVLGVLVIVAALAVSFGFRNKPMRPGAPMDLAALRRGYRTIFSNPNAPICFAAVLVEGTCVMGAFPFVA
AFLHDQGQESLAVAGLVIAGFAVGGLLYTLTVARLLPRLGVRGMMIGGGALVGLQLAIIAFGPPWQAQAVAFVAMGMGFY
MLHGCVQVFASELSETARGTAMSLHSFFFFLGQTTGPIAYGFGLAHAGKVPTMLIAAITMLALGFILAVVLRPRPPTDAV
ESPRPDPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=370, Percent_Identity=24.0540540540541, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41782; Mature: 41651

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQGDSAVVRPSLPPALKIIALSGFAASLSARALDPVLPRIASEFSVSIATAAGLAAVTA
CCCCCCEECCCCCHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTFAVVQPAIGALADMFGKARLMIVCLALLGFASLLGAVSSSFEVLFLCRILAGIGAGGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FPVALGLTSDLVEPGRRQVAIGRVLGGSMTGNLLGASASGVIGDVLGWRGVLAVLGVLVI
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VAALAVSFGFRNKPMRPGAPMDLAALRRGYRTIFSNPNAPICFAAVLVEGTCVMGAFPFV
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHH
AAFLHDQGQESLAVAGLVIAGFAVGGLLYTLTVARLLPRLGVRGMMIGGGALVGLQLAII
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHEEE
AFGPPWQAQAVAFVAMGMGFYMLHGCVQVFASELSETARGTAMSLHSFFFFLGQTTGPIA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YGFGLAHAGKVPTMLIAAITMLALGFILAVVLRPRPPTDAVESPRPDPA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]