| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749806
Identifier: 86749806
GI number: 86749806
Start: 3073667
End: 3074047
Strand: Reverse
Name: 86749806
Synonym: RPB_2689
Alternate gene names: NA
Gene position: 3074047-3073667 (Counterclockwise)
Preceding gene: 86749807
Following gene: 86749805
Centisome position: 57.66
GC content: 64.04
Gene sequence:
>381_bases ATGCCGAAGCCTGACACGAACGCTGCACCGTTCTCCTACGAGGGGCTGGATCGCGTGATCCACGAGAAGGCGAGGCTGGG GATGCTGACCTCGCTGATGGCGCACCCGAAGGGGCTTGCGTTCGCCGACCTCAAAAGGCTATGCGGACTGACGGACGGCA ATCTCAGCCGGCATCTTCAGGTGCTGCAGGAAGCCGGAATGGTCGAGGTGTCGAAGGGATACGAAGCCAACCGGCCGCTG ACGACCTGTCGTTTGACGAAGACCGGCCGCCGCCAGTTTCTCGATTACCTCACCGTGTTGGAGCAGCTCGTGCGCGACGC CGCCAAGGCGGCCGGCAGTAGCGATCCGCTGCCGACCGGACTTCACACGCGTCCCGTCTGA
Upstream 100 bases:
>100_bases AGCGAAAGTGCGGCCGTCTCGCCGCTAGCGATGGGTGTTCCGTTCGTGGTCGGTCAATTGCTGATGGCTGCCGTGCTGCG GTTTGCGTCGGGAGACGACG
Downstream 100 bases:
>100_bases AAGCACGTCTCGCCTGAACCACGTCCCCCTTTTTGCACGGAGACTTTGTGATGCAAAGCAATCTACATTCCAAACTACAT GTCGGCATCATCATGGACGG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; MarR/EmrR Family Transcriptional Regulator; Regulatory Protein Arsr; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator MarR/EmrR Family; Arsr Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator ArsR Family; PAS/PAC Sensor Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQVLQEAGMVEVSKGYEANRPL TTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTGLHTRPV
Sequences:
>Translated_126_residues MPKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQVLQEAGMVEVSKGYEANRPL TTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTGLHTRPV >Mature_125_residues PKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQVLQEAGMVEVSKGYEANRPLT TCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTGLHTRPV
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13814; Mature: 13683
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH VLQEAGMVEVSKGYEANRPLTTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTG HHHHCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LHTRPV CCCCCC >Mature Secondary Structure PKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH VLQEAGMVEVSKGYEANRPLTTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTG HHHHCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LHTRPV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA