Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749807

Identifier: 86749807

GI number: 86749807

Start: 3074034

End: 3074651

Strand: Reverse

Name: 86749807

Synonym: RPB_2690

Alternate gene names: NA

Gene position: 3074651-3074034 (Counterclockwise)

Preceding gene: 86749809

Following gene: 86749806

Centisome position: 57.67

GC content: 64.08

Gene sequence:

>618_bases
ATGAGCGATCTCGACAAGGCCTTGGCTGACATTTTCGCCATTCGCAGCCAGATCGCTGCGGGCACGGCGTTCCGTGGATA
TGGCCCGGCTGCTCTGGCGGGCACCGCCGGTCTGGCCTTGGTCACCACGATTGCGCAGTCGCTCTGGCTCGATGACCCGA
ACAGCCATCTGCTGGCGTTCTTCTTGGGCTGGATCGCAACCGCGCTGTTGTCCGCAATGATGATCTGGCTCGAGATGCGG
GCGCGTTCGCGGCGTCACCATTCGGGTCTCGCCGATGCGATGATCCATCAGGCGGTCGAACAATTCGTGCCCGCCGGGGT
GGCGGGAGCTTTGCTCGGTGTGACGCTTTGGAAGTTCGCCCCGGGGACGCTCTGGATGCTGCCCGGCTTGTGGCAGATCC
TCGTCGGCCTCGGGATTTTCGCGTCCGTACGGATGCTGCCACGCCCTGTGGCGTTGGTCGGCGCGTGGTATTTCGTAGCG
GGATTCAGCGTGCTGGCGCTCAGCAGCGAAAGTGCGGCCGTCTCGCCGCTAGCGATGGGTGTTCCGTTCGTGGTCGGTCA
ATTGCTGATGGCTGCCGTGCTGCGGTTTGCGTCGGGAGACGACGATGCCGAAGCCTGA

Upstream 100 bases:

>100_bases
GAGAGTGGTGTTCAAATACTCCCCGCTCAGCTTTCGCAATCCAGGGGCTTGCATTTGCTTTGCACGGACGTATACTTTGC
ATTACAAAGTGAGGTGAGGC

Downstream 100 bases:

>100_bases
CACGAACGCTGCACCGTTCTCCTACGAGGGGCTGGATCGCGTGATCCACGAGAAGGCGAGGCTGGGGATGCTGACCTCGC
TGATGGCGCACCCGAAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSDLDKALADIFAIRSQIAAGTAFRGYGPAALAGTAGLALVTTIAQSLWLDDPNSHLLAFFLGWIATALLSAMMIWLEMR
ARSRRHHSGLADAMIHQAVEQFVPAGVAGALLGVTLWKFAPGTLWMLPGLWQILVGLGIFASVRMLPRPVALVGAWYFVA
GFSVLALSSESAAVSPLAMGVPFVVGQLLMAAVLRFASGDDDAEA

Sequences:

>Translated_205_residues
MSDLDKALADIFAIRSQIAAGTAFRGYGPAALAGTAGLALVTTIAQSLWLDDPNSHLLAFFLGWIATALLSAMMIWLEMR
ARSRRHHSGLADAMIHQAVEQFVPAGVAGALLGVTLWKFAPGTLWMLPGLWQILVGLGIFASVRMLPRPVALVGAWYFVA
GFSVLALSSESAAVSPLAMGVPFVVGQLLMAAVLRFASGDDDAEA
>Mature_204_residues
SDLDKALADIFAIRSQIAAGTAFRGYGPAALAGTAGLALVTTIAQSLWLDDPNSHLLAFFLGWIATALLSAMMIWLEMRA
RSRRHHSGLADAMIHQAVEQFVPAGVAGALLGVTLWKFAPGTLWMLPGLWQILVGLGIFASVRMLPRPVALVGAWYFVAG
FSVLALSSESAAVSPLAMGVPFVVGQLLMAAVLRFASGDDDAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21608; Mature: 21476

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLDKALADIFAIRSQIAAGTAFRGYGPAALAGTAGLALVTTIAQSLWLDDPNSHLLAF
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FLGWIATALLSAMMIWLEMRARSRRHHSGLADAMIHQAVEQFVPAGVAGALLGVTLWKFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
PGTLWMLPGLWQILVGLGIFASVRMLPRPVALVGAWYFVAGFSVLALSSESAAVSPLAMG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VPFVVGQLLMAAVLRFASGDDDAEA
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDLDKALADIFAIRSQIAAGTAFRGYGPAALAGTAGLALVTTIAQSLWLDDPNSHLLAF
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FLGWIATALLSAMMIWLEMRARSRRHHSGLADAMIHQAVEQFVPAGVAGALLGVTLWKFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
PGTLWMLPGLWQILVGLGIFASVRMLPRPVALVGAWYFVAGFSVLALSSESAAVSPLAMG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VPFVVGQLLMAAVLRFASGDDDAEA
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA