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The map label for this gene is 86749769

Identifier: 86749769

GI number: 86749769

Start: 3030753

End: 3031436

Strand: Direct

Name: 86749769

Synonym: RPB_2652

Alternate gene names: NA

Gene position: 3030753-3031436 (Clockwise)

Preceding gene: 86749768

Following gene: 86749771

Centisome position: 56.84

GC content: 69.15

Gene sequence:

>684_bases
TTGGACAAAGCGCCGGATGCATTCCGAACCATCAGCGAAGTCGCCGACGAACTCGACATTCCGCAGCACGTCTTGAGGTT
CTGGGAGACGCGGTTCACCCAGATCAAGCCGATGAAGCGCTCGGGCGGCCGGCGCTACTACCGGCCGGACGACGTCGACC
TGCTCAAGGGCATCCGCCGGCTGCTGTACGGCGAAGGCTACACCATTCGCGGCGTCCAGCGGATCCTCAAGGAGCACGGC
ATCAAGTCGGTGCAGCGGCTCGCCGACAACGAGGCCAGCGCCACTTTCGGCGCGGTCGAGGAAGCGATCGGCCGCAGCGT
CGCCGAGGAAGACTACGAGCCCGCGCCCGGCGGCATCGATCTCGACGACGACGACTACGAGGGCGAGAACGAGGGCCTCG
ACCTGCACGCCATGATGGCGGAACCCGACCTGCGCGCCGCAGCGGCACCGGCCCGCTCGGCCAGCCAGGCAACGGCCCGT
CGCGCCCCCGCATTCGAGGACGACGATGACGACCTGCCGGCAATGGCGTCGCCGGCGCCACGGCTGAATCTGCCGCCGCT
GGACCTGCCGCCGGCGAATAATGCCCCGGCGCGTCCGCCGGTCGATCTCGCCCCGCTGAAGGCCGTGCTGCAGGACCTGA
TCGCCTGCCGCGAGGCGCTCGACGCCGCAATGAAGGACGGCTGA

Upstream 100 bases:

>100_bases
AATGCCAACGGCACCGCATCGTCGATGTCGTCGTCCGCCAATGCCGCGGCCGGCGACAAGTCCGAATCGGCATCCGGCAC
CTGACGACAGGAGACTGCAT

Downstream 100 bases:

>100_bases
GGCGGTCGGTTTCGCCGCGCAGGAACCGCGATTTGATGCCGCGCGCCTTGCGCGAGGCGCCGATCGAAGCTACAGGATCA
GGGCCGAAACGGCATCGGAG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDKAPDAFRTISEVADELDIPQHVLRFWETRFTQIKPMKRSGGRRYYRPDDVDLLKGIRRLLYGEGYTIRGVQRILKEHG
IKSVQRLADNEASATFGAVEEAIGRSVAEEDYEPAPGGIDLDDDDYEGENEGLDLHAMMAEPDLRAAAAPARSASQATAR
RAPAFEDDDDDLPAMASPAPRLNLPPLDLPPANNAPARPPVDLAPLKAVLQDLIACREALDAAMKDG

Sequences:

>Translated_227_residues
MDKAPDAFRTISEVADELDIPQHVLRFWETRFTQIKPMKRSGGRRYYRPDDVDLLKGIRRLLYGEGYTIRGVQRILKEHG
IKSVQRLADNEASATFGAVEEAIGRSVAEEDYEPAPGGIDLDDDDYEGENEGLDLHAMMAEPDLRAAAAPARSASQATAR
RAPAFEDDDDDLPAMASPAPRLNLPPLDLPPANNAPARPPVDLAPLKAVLQDLIACREALDAAMKDG
>Mature_227_residues
MDKAPDAFRTISEVADELDIPQHVLRFWETRFTQIKPMKRSGGRRYYRPDDVDLLKGIRRLLYGEGYTIRGVQRILKEHG
IKSVQRLADNEASATFGAVEEAIGRSVAEEDYEPAPGGIDLDDDDYEGENEGLDLHAMMAEPDLRAAAAPARSASQATAR
RAPAFEDDDDDLPAMASPAPRLNLPPLDLPPANNAPARPPVDLAPLKAVLQDLIACREALDAAMKDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 24871; Mature: 24871

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKAPDAFRTISEVADELDIPQHVLRFWETRFTQIKPMKRSGGRRYYRPDDVDLLKGIRR
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH
LLYGEGYTIRGVQRILKEHGIKSVQRLADNEASATFGAVEEAIGRSVAEEDYEPAPGGID
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LDDDDYEGENEGLDLHAMMAEPDLRAAAAPARSASQATARRAPAFEDDDDDLPAMASPAP
CCCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RLNLPPLDLPPANNAPARPPVDLAPLKAVLQDLIACREALDAAMKDG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKAPDAFRTISEVADELDIPQHVLRFWETRFTQIKPMKRSGGRRYYRPDDVDLLKGIRR
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH
LLYGEGYTIRGVQRILKEHGIKSVQRLADNEASATFGAVEEAIGRSVAEEDYEPAPGGID
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LDDDDYEGENEGLDLHAMMAEPDLRAAAAPARSASQATARRAPAFEDDDDDLPAMASPAP
CCCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RLNLPPLDLPPANNAPARPPVDLAPLKAVLQDLIACREALDAAMKDG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]