Click here to switch to the map view.

The map label for this gene is 86749765

Identifier: 86749765

GI number: 86749765

Start: 3027399

End: 3027962

Strand: Direct

Name: 86749765

Synonym: RPB_2648

Alternate gene names: NA

Gene position: 3027399-3027962 (Clockwise)

Preceding gene: 86749764

Following gene: 86749766

Centisome position: 56.78

GC content: 67.38

Gene sequence:

>564_bases
ATGAGCGGCGACAATCCCTGGCGCGTGCCGATTGGGGTGATGCAGATCCCCGAGACGGGGCTGCATCGTGACATCGAGGC
CGGCGAGGCCGAACGGACCGCAATGGCCGCTCTCGGTGGGCTGCGCGAGATCCTGTCGGCGAAGGCCGCATTCGACCTGA
CGCCGGAAAGCGGCGGCCGGGTGCGCGTCACCGGCCGGGTGCAGGCCAGGGTCGGCCAGACCTGTGTGGTGACGCTCGAT
CCGATCGAAAGCGCGATCGACGAGGATGTCGACCTGACCTTCATGCCGGCGGAGCAGATTCGCGAATTGTCTGAGACGGT
CGACGACGACGGCGAGCCCGATCCGGGCGATCCGCCGGAGGCGATCGAGCGCGGCATGATCGATATTGGCCGGGTCGCGG
CCGACGCGCTGTTTCTCGGCATCGATCCGTATCCGCGCAAGCCCGATGCGGTGTTCGAGCCGGTGGTCGAGCCTGATCCC
CCCGAAGAACATCCGTTTGCGGCGCTGCAGGCGTTGAAAGCTCCGGCCACACCGCCGCGGTCACGCAAACCCAAGGGCGA
TTAG

Upstream 100 bases:

>100_bases
AGTGATCAAAGCACTCGACGGCATCGAGCCGTCCAAGCTACGCAATGGCGAGCTGCGGTTTCCCGCGCCGCCGGCTGCTT
GAGCGCGGAAGGACAAGACG

Downstream 100 bases:

>100_bases
CGACCGCGCGAGGGGCATATTGTGGTAATCGCGCAGGATTCGCATCTGTGGCCCGGCCCGCCGTGGTGGAATGCGACTTA
AATCTGCCCGGTCAAGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSGDNPWRVPIGVMQIPETGLHRDIEAGEAERTAMAALGGLREILSAKAAFDLTPESGGRVRVTGRVQARVGQTCVVTLD
PIESAIDEDVDLTFMPAEQIRELSETVDDDGEPDPGDPPEAIERGMIDIGRVAADALFLGIDPYPRKPDAVFEPVVEPDP
PEEHPFAALQALKAPATPPRSRKPKGD

Sequences:

>Translated_187_residues
MSGDNPWRVPIGVMQIPETGLHRDIEAGEAERTAMAALGGLREILSAKAAFDLTPESGGRVRVTGRVQARVGQTCVVTLD
PIESAIDEDVDLTFMPAEQIRELSETVDDDGEPDPGDPPEAIERGMIDIGRVAADALFLGIDPYPRKPDAVFEPVVEPDP
PEEHPFAALQALKAPATPPRSRKPKGD
>Mature_186_residues
SGDNPWRVPIGVMQIPETGLHRDIEAGEAERTAMAALGGLREILSAKAAFDLTPESGGRVRVTGRVQARVGQTCVVTLDP
IESAIDEDVDLTFMPAEQIRELSETVDDDGEPDPGDPPEAIERGMIDIGRVAADALFLGIDPYPRKPDAVFEPVVEPDPP
EEHPFAALQALKAPATPPRSRKPKGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20080; Mature: 19949

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDNPWRVPIGVMQIPETGLHRDIEAGEAERTAMAALGGLREILSAKAAFDLTPESGGR
CCCCCCEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCE
VRVTGRVQARVGQTCVVTLDPIESAIDEDVDLTFMPAEQIRELSETVDDDGEPDPGDPPE
EEEEEEEEECCCCEEEEEECCHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHH
AIERGMIDIGRVAADALFLGIDPYPRKPDAVFEPVVEPDPPEEHPFAALQALKAPATPPR
HHHHCCHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SRKPKGD
CCCCCCC
>Mature Secondary Structure 
SGDNPWRVPIGVMQIPETGLHRDIEAGEAERTAMAALGGLREILSAKAAFDLTPESGGR
CCCCCEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCE
VRVTGRVQARVGQTCVVTLDPIESAIDEDVDLTFMPAEQIRELSETVDDDGEPDPGDPPE
EEEEEEEEECCCCEEEEEECCHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHH
AIERGMIDIGRVAADALFLGIDPYPRKPDAVFEPVVEPDPPEEHPFAALQALKAPATPPR
HHHHCCHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SRKPKGD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA