Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86749764

Identifier: 86749764

GI number: 86749764

Start: 3026841

End: 3027380

Strand: Direct

Name: 86749764

Synonym: RPB_2647

Alternate gene names: NA

Gene position: 3026841-3027380 (Clockwise)

Preceding gene: 86749762

Following gene: 86749765

Centisome position: 56.77

GC content: 63.89

Gene sequence:

>540_bases
ATGATCTGGCCGTTCAATCACCTTCGTCCGCCCCGGACGCCGCCGCGCCGCACCATCGAGACGATCTATGGCATGATCGT
GGCGCAGGCGCGAGAACCCGCATTTTATCAGCAATATGGCGTCGCCGATACGGTTAACGGCCGATTCGAGATGATCGTCG
TGCATCTTTGGCTAGTGCTGCGACGGATTCGCGCAACCCAGGATTCGGCCGGCTTCGCGCAAGCGCTGTTCGACTATTTC
TGCAGCGACCTCGACGCGAATCTGCGCGAACTCGGCGTCGGCGACCTCACCGTGCCGAAGCGGATGCAGGCGTTCGGCGA
GGCGTTCTACGGCCGCTCGGCGGCCTACGATCTGGCGCTGACCGAGGGCGATGAAGCGCTGGCGATGGCGCTCGACCGGA
ACGTCCTCTACGGCGCGGACATTGAAAACGCGCGGCGACTGGCGGCCTATGTCGGGCAAGTGATCAAAGCACTCGACGGC
ATCGAGCCGTCCAAGCTACGCAATGGCGAGCTGCGGTTTCCCGCGCCGCCGGCTGCTTGA

Upstream 100 bases:

>100_bases
ATTCGGAAGCTGGCTCCATCCCCTTGCATCGCGCAGGGCGTTGACGTACCGGGCAGGCACTCGGAATGCAATCCCGAAGG
GCCCGCGTCAGGAACCCGCA

Downstream 100 bases:

>100_bases
GCGCGGAAGGACAAGACGATGAGCGGCGACAATCCCTGGCGCGTGCCGATTGGGGTGATGCAGATCCCCGAGACGGGGCT
GCATCGTGACATCGAGGCCG

Product: ubiquinol-cytochrome C chaperone

Products: NA

Alternate protein names: CBP3 Protein; Ubiquinol-Cytochrome C Reductase Chaperone; Ubiquinol-Cytochrome C Chaperone/Upf; Ubiquinol-Cytochrome C Chaperone Superfamily; CBP3 Protein Mitochondrial; Ubiquinol-Cytochrome C Chaperone/UPF; Ubiquinol-Cytochrome C Reductase Complex Chaperone CBP

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIWPFNHLRPPRTPPRRTIETIYGMIVAQAREPAFYQQYGVADTVNGRFEMIVVHLWLVLRRIRATQDSAGFAQALFDYF
CSDLDANLRELGVGDLTVPKRMQAFGEAFYGRSAAYDLALTEGDEALAMALDRNVLYGADIENARRLAAYVGQVIKALDG
IEPSKLRNGELRFPAPPAA

Sequences:

>Translated_179_residues
MIWPFNHLRPPRTPPRRTIETIYGMIVAQAREPAFYQQYGVADTVNGRFEMIVVHLWLVLRRIRATQDSAGFAQALFDYF
CSDLDANLRELGVGDLTVPKRMQAFGEAFYGRSAAYDLALTEGDEALAMALDRNVLYGADIENARRLAAYVGQVIKALDG
IEPSKLRNGELRFPAPPAA
>Mature_179_residues
MIWPFNHLRPPRTPPRRTIETIYGMIVAQAREPAFYQQYGVADTVNGRFEMIVVHLWLVLRRIRATQDSAGFAQALFDYF
CSDLDANLRELGVGDLTVPKRMQAFGEAFYGRSAAYDLALTEGDEALAMALDRNVLYGADIENARRLAAYVGQVIKALDG
IEPSKLRNGELRFPAPPAA

Specific function: Unknown

COG id: COG5452

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20021; Mature: 20021

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWPFNHLRPPRTPPRRTIETIYGMIVAQAREPAFYQQYGVADTVNGRFEMIVVHLWLVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
RRIRATQDSAGFAQALFDYFCSDLDANLRELGVGDLTVPKRMQAFGEAFYGRSAAYDLAL
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
TEGDEALAMALDRNVLYGADIENARRLAAYVGQVIKALDGIEPSKLRNGELRFPAPPAA
CCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MIWPFNHLRPPRTPPRRTIETIYGMIVAQAREPAFYQQYGVADTVNGRFEMIVVHLWLVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
RRIRATQDSAGFAQALFDYFCSDLDANLRELGVGDLTVPKRMQAFGEAFYGRSAAYDLAL
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
TEGDEALAMALDRNVLYGADIENARRLAAYVGQVIKALDGIEPSKLRNGELRFPAPPAA
CCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA