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The map label for this gene is 86749763

Identifier: 86749763

GI number: 86749763

Start: 3026266

End: 3026742

Strand: Reverse

Name: 86749763

Synonym: RPB_2646

Alternate gene names: NA

Gene position: 3026742-3026266 (Counterclockwise)

Preceding gene: 86749770

Following gene: 86749750

Centisome position: 56.77

GC content: 62.89

Gene sequence:

>477_bases
ATGAGTATTTCGATCGAACGAAGCCGTCGCGACGGCCTCCGCGCGATGGCCCGTCGTCGGCTCGGCCCGGCGCTGGCGCT
GGCGCTGCTGGGCGCCGGATTGTCAGCCTGCACCTCCGAGCAATTCCAGAAGGGCTATATCCTCCCCAATGGCGCGCTCG
AGCAGATTCCGATCGGCGCCAGCCAGGATCAGGTGCTGATCGTGATGGGTACCCCCTCCACCGTCGCGACCCTGAACGGT
GAAGTGTTCTATTACATCTCGCAGCGCTCCGAGCGGCCGGTGGCGTTCATGCCGCAAAAGGTGGTCGATCAGCGCGTGAT
CGCGATCTATTTCGACCAGAACCGCCAGGTTCGCCGTATCGCCAATTACGGCCTCCAGGACGGCAAGATCTTCGACTTCA
TCAGCCGCACCACGCCGACCTCGGGCCAGGAAATGAGCTATCTGGCGCCGCTGTTCAGGCTGATCAGCTTCCGCTGA

Upstream 100 bases:

>100_bases
ATTGCGGGTTCCTGACGCGGGCCCTTCGGGATTGCATTCCGAGTGCCTGCCCGGTACGTCAACGCCCTGCGCGATGCAAG
GGGATGGAGCCAGCTTCCGA

Downstream 100 bases:

>100_bases
TCACATCGCGCGGGGCGGCCGCGGCCGGCCTGCGCTAAGCCAGCCCCTTGCCGCGCGCCCAGTCCGCGATCAGGGCGTTG
ACCTGATCCGGCGCGTCCTG

Product: SmpA/OmlA

Products: NA

Alternate protein names: SmpA/OmlA; SmpA/OmlA Domain Protein; Outer Membrane Protein; SmpA/OmlA Family Outer Membrane Protein; SmAll Protein A; SmpA/OmlA Family Lipoprotein; SmpA / OmlA Family; SmpA Protein; Small Protein A

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSISIERSRRDGLRAMARRRLGPALALALLGAGLSACTSEQFQKGYILPNGALEQIPIGASQDQVLIVMGTPSTVATLNG
EVFYYISQRSERPVAFMPQKVVDQRVIAIYFDQNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR

Sequences:

>Translated_158_residues
MSISIERSRRDGLRAMARRRLGPALALALLGAGLSACTSEQFQKGYILPNGALEQIPIGASQDQVLIVMGTPSTVATLNG
EVFYYISQRSERPVAFMPQKVVDQRVIAIYFDQNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR
>Mature_157_residues
SISIERSRRDGLRAMARRRLGPALALALLGAGLSACTSEQFQKGYILPNGALEQIPIGASQDQVLIVMGTPSTVATLNGE
VFYYISQRSERPVAFMPQKVVDQRVIAIYFDQNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17634; Mature: 17502

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISIERSRRDGLRAMARRRLGPALALALLGAGLSACTSEQFQKGYILPNGALEQIPIGA
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCC
SQDQVLIVMGTPSTVATLNGEVFYYISQRSERPVAFMPQKVVDQRVIAIYFDQNRQVRRI
CCCCEEEEEECCCEEEEECCEEEEEEECCCCCCEEECCHHHHCCEEEEEEECCCCHHHHH
ANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR
HHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SISIERSRRDGLRAMARRRLGPALALALLGAGLSACTSEQFQKGYILPNGALEQIPIGA
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCC
SQDQVLIVMGTPSTVATLNGEVFYYISQRSERPVAFMPQKVVDQRVIAIYFDQNRQVRRI
CCCCEEEEEECCCEEEEECCEEEEEEECCCCCCEEECCHHHHCCEEEEEEECCCCHHHHH
ANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR
HHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA