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The map label for this gene is 86749749

Identifier: 86749749

GI number: 86749749

Start: 3013015

End: 3013893

Strand: Direct

Name: 86749749

Synonym: RPB_2632

Alternate gene names: NA

Gene position: 3013015-3013893 (Clockwise)

Preceding gene: 86749748

Following gene: 86749751

Centisome position: 56.51

GC content: 47.78

Gene sequence:

>879_bases
ATGACGGTCTTTATTAGTTACAATCATAGCGATGTTGGGTTTGTCGATTGGCTGGCCAACCGTCTTGTGTCTCGCAGGCA
CCATATTTGGATGGATAGATGGGAATTGAATGTCGGAGATTCGTTGATATCAAGAGTGCAAGCCGCACTAACAGCATCTG
ATGCCATCATTATTGTTCTCTCGACGAATTCTATCGCGTCGGAATGGTGCAAGAAGGAGCTCAATTCAGGTATACTGCGT
GAGCTTGAAGAAAAGCGAGTTCTGGTGTTGCCCTGCGTCATCGATCACTGCACAGTTCCGTTATTTCTTAGAGAGAAACT
ATACGCTGATTTTAGAAAAGACAGAGAAGTGGCGCTCGATCAAGTTCACGACGCGCTCCTTCGGATTACAAATCCTCAAC
AAGGAAGACTTGAAAGTCCGGATTTCCATACCGACTGGAGTTATGACTGGAGTAAAGGGCGTTCTTCGCGGCGGTGGTAT
TTTGAGTGGACGTTTGTAGATCACGGGCCCGCCATCGAATACTGCATACTCACGGAATGTAAGATTGCATGCAATCAATT
AGCCTCTGACATGTTCCAGAATTTGGACGAGGGTGCTCGTCAAGACTACATTCTCAGAGTATTCGCGCTGCTCGTCTCAG
AAACCGCCAAACGGCAATCCAAAATTCGCATTCGGGACGCATTTCGGCAAATTGGAATGTTGGAAATGCTGGGCGGCTCC
GATGATGAGGAGTGGCTTGTGGAGATATCAAGCCGGCGCATGGGGATAGACAATGGAAAAGACACGCTTGTGCACGTTGA
TCAAATACTTGAGCGAGCCCTTTCAGAAATGAATGTGAAGTTAGCGAAGCCTAACAGAGCCACGAAAGGGGAGCGCTAG

Upstream 100 bases:

>100_bases
CCACTGGTTCAGAGCGATTAACGGTTGTCCAGTCAGGGGACTCGCATTGTCGTAGATTTTGGCCGCTTCGACTGAAATTC
CTACCGACAGGTGAGGTTAA

Downstream 100 bases:

>100_bases
CGGTCTAGCCGAGCTGCCGGGGTGTCCCGGACGTTGTTTCCCTCACATGCGCCGTGATCGCTCGCAAAATCCTCGCTCGC
CCGCGGTCCGTTCTCGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTVFISYNHSDVGFVDWLANRLVSRRHHIWMDRWELNVGDSLISRVQAALTASDAIIIVLSTNSIASEWCKKELNSGILR
ELEEKRVLVLPCVIDHCTVPLFLREKLYADFRKDREVALDQVHDALLRITNPQQGRLESPDFHTDWSYDWSKGRSSRRWY
FEWTFVDHGPAIEYCILTECKIACNQLASDMFQNLDEGARQDYILRVFALLVSETAKRQSKIRIRDAFRQIGMLEMLGGS
DDEEWLVEISSRRMGIDNGKDTLVHVDQILERALSEMNVKLAKPNRATKGER

Sequences:

>Translated_292_residues
MTVFISYNHSDVGFVDWLANRLVSRRHHIWMDRWELNVGDSLISRVQAALTASDAIIIVLSTNSIASEWCKKELNSGILR
ELEEKRVLVLPCVIDHCTVPLFLREKLYADFRKDREVALDQVHDALLRITNPQQGRLESPDFHTDWSYDWSKGRSSRRWY
FEWTFVDHGPAIEYCILTECKIACNQLASDMFQNLDEGARQDYILRVFALLVSETAKRQSKIRIRDAFRQIGMLEMLGGS
DDEEWLVEISSRRMGIDNGKDTLVHVDQILERALSEMNVKLAKPNRATKGER
>Mature_291_residues
TVFISYNHSDVGFVDWLANRLVSRRHHIWMDRWELNVGDSLISRVQAALTASDAIIIVLSTNSIASEWCKKELNSGILRE
LEEKRVLVLPCVIDHCTVPLFLREKLYADFRKDREVALDQVHDALLRITNPQQGRLESPDFHTDWSYDWSKGRSSRRWYF
EWTFVDHGPAIEYCILTECKIACNQLASDMFQNLDEGARQDYILRVFALLVSETAKRQSKIRIRDAFRQIGMLEMLGGSD
DEEWLVEISSRRMGIDNGKDTLVHVDQILERALSEMNVKLAKPNRATKGER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33858; Mature: 33727

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVFISYNHSDVGFVDWLANRLVSRRHHIWMDRWELNVGDSLISRVQAALTASDAIIIVL
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEE
STNSIASEWCKKELNSGILRELEEKRVLVLPCVIDHCTVPLFLREKLYADFRKDREVALD
ECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QVHDALLRITNPQQGRLESPDFHTDWSYDWSKGRSSRRWYFEWTFVDHGPAIEYCILTEC
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHH
KIACNQLASDMFQNLDEGARQDYILRVFALLVSETAKRQSKIRIRDAFRQIGMLEMLGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
DDEEWLVEISSRRMGIDNGKDTLVHVDQILERALSEMNVKLAKPNRATKGER
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TVFISYNHSDVGFVDWLANRLVSRRHHIWMDRWELNVGDSLISRVQAALTASDAIIIVL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEE
STNSIASEWCKKELNSGILRELEEKRVLVLPCVIDHCTVPLFLREKLYADFRKDREVALD
ECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QVHDALLRITNPQQGRLESPDFHTDWSYDWSKGRSSRRWYFEWTFVDHGPAIEYCILTEC
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHH
KIACNQLASDMFQNLDEGARQDYILRVFALLVSETAKRQSKIRIRDAFRQIGMLEMLGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
DDEEWLVEISSRRMGIDNGKDTLVHVDQILERALSEMNVKLAKPNRATKGER
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA