| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is adk [H]
Identifier: 86749436
GI number: 86749436
Start: 2665080
End: 2666105
Strand: Direct
Name: adk [H]
Synonym: RPB_2316
Alternate gene names: 86749436
Gene position: 2665080-2666105 (Clockwise)
Preceding gene: 86749435
Following gene: 86749437
Centisome position: 49.99
GC content: 66.28
Gene sequence:
>1026_bases ATGAGACTGATCCTTCTCGGGCCGCCGGGGGCGGGCAAGGGAACGCAAGCGGCCCGCCTGGTTCAGCAATACGGACTGGT GCAGCTTTCCACCGGAGACATGCTGCGCGCCGCGGTCGCGGCCGGCACGCCGGTCGGGCTGAAGGCCAAGGACATCATGG CGAGCGGCGGCCTGGTGCCGGACGAGGTGGTGATCGGCATCATCTCCGACCGCATCGAGCAGCCCGACGCCACCAACGGC TTCATCCTCGACGGCTTTCCGCGCACCGTGCCGCAGGCCGAGGCGCTCGACGCGCTGCTCAAGGACAAGAAGCTCGGCCT CGATGCCGTGGTCGAATTGCGGGTCAACGAAAGCGCGCTGCTGGCCCGGGTCGAGACCCGCGTCGCGGAGATGCGCGAGC GGGGCGAGGAGCCCCGCGCCGACGACAACGCCGAGGCGCTGGCGAAGCGCCTGACCGCGTATCGCCTGCAGACCGAGCCG CTGGTCGAGTATTATTCGGACAAGCGCAAGCTGCTGACCGTCGACGGCATGATGACCATCGACGAGGTCACCCGCGAGAT CGGCCGGATCCTTGAGGCGCTCGGCGAGGCCAACGCCAAGAAGGCTGCCAAGACCGCCGCTGCCAAGCGCGCGGTCAAAA AGAGCGCGAAGCCGGCCAAGGCTTCCGGCAAGCCCAAGGCTTCCGGCAAGGCGAAAGCTCCCGGCAAGGCTCCGGCCAAG AAAGCTTCGGCCAAGAAGGCAGTTAGCGGAAAATCTTCGAGCAAGGCGGAATCCGCCAAGACGGCTTCGGCCGGTCTGAA GAAGCCGGCGAAAGCCACGAAGAAGACTGGCAAAAAGGCCGCCAAGGTCGCGAGCAAGGCGCCCGCCAAGGCGGCCAAGA CGGCCGGCAAGAAAGCAAACAAATCGAAGGCCAAATCGGCCGCCAAGGCGCCGAAACGCGGCGCCAAGGTGACGAAGAAG GCGGCCAAGAAGGCGGGGACGCCCTCCGCCCAAAAGGCCAGGAAAGTCAACAAAAAGCGAGCTTGA
Upstream 100 bases:
>100_bases TCAGCGTCACGATGGACACGGTCGCCCAGGTGCAGGGCTATCTGCTGGCGCATCAGTATGAAGGCCTGATCCGGAAGTCG AAGTTGAGGGGCCGTAAGAA
Downstream 100 bases:
>100_bases ACCTGGATTCGGTTGACGAACAGAAACGGAATCCTTTAATAAGGCCCGATATCCCGTCGGATAGGTTTCAGACGATGCCG GGCCCCAGAACGACCGAGGG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MRLILLGPPGAGKGTQAARLVQQYGLVQLSTGDMLRAAVAAGTPVGLKAKDIMASGGLVPDEVVIGIISDRIEQPDATNG FILDGFPRTVPQAEALDALLKDKKLGLDAVVELRVNESALLARVETRVAEMRERGEEPRADDNAEALAKRLTAYRLQTEP LVEYYSDKRKLLTVDGMMTIDEVTREIGRILEALGEANAKKAAKTAAAKRAVKKSAKPAKASGKPKASGKAKAPGKAPAK KASAKKAVSGKSSSKAESAKTASAGLKKPAKATKKTGKKAAKVASKAPAKAAKTAGKKANKSKAKSAAKAPKRGAKVTKK AAKKAGTPSAQKARKVNKKRA
Sequences:
>Translated_341_residues MRLILLGPPGAGKGTQAARLVQQYGLVQLSTGDMLRAAVAAGTPVGLKAKDIMASGGLVPDEVVIGIISDRIEQPDATNG FILDGFPRTVPQAEALDALLKDKKLGLDAVVELRVNESALLARVETRVAEMRERGEEPRADDNAEALAKRLTAYRLQTEP LVEYYSDKRKLLTVDGMMTIDEVTREIGRILEALGEANAKKAAKTAAAKRAVKKSAKPAKASGKPKASGKAKAPGKAPAK KASAKKAVSGKSSSKAESAKTASAGLKKPAKATKKTGKKAAKVASKAPAKAAKTAGKKANKSKAKSAAKAPKRGAKVTKK AAKKAGTPSAQKARKVNKKRA >Mature_341_residues MRLILLGPPGAGKGTQAARLVQQYGLVQLSTGDMLRAAVAAGTPVGLKAKDIMASGGLVPDEVVIGIISDRIEQPDATNG FILDGFPRTVPQAEALDALLKDKKLGLDAVVELRVNESALLARVETRVAEMRERGEEPRADDNAEALAKRLTAYRLQTEP LVEYYSDKRKLLTVDGMMTIDEVTREIGRILEALGEANAKKAAKTAAAKRAVKKSAKPAKASGKPKASGKAKAPGKAPAK KASAKKAVSGKSSSKAESAKTASAGLKKPAKATKKTGKKAAKVASKAPAKAAKTAGKKANKSKAKSAAKAPKRGAKVTKK AAKKAGTPSAQKARKVNKKRA
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4502013, Length=221, Percent_Identity=42.5339366515837, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI7524346, Length=220, Percent_Identity=42.2727272727273, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI4502011, Length=198, Percent_Identity=35.3535353535354, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI19923437, Length=200, Percent_Identity=34, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI310110345, Length=200, Percent_Identity=33.5, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI53832003, Length=200, Percent_Identity=33.5, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI8051579, Length=200, Percent_Identity=33.5, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI53832001, Length=200, Percent_Identity=33.5, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI7706497, Length=199, Percent_Identity=31.6582914572864, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI28144899, Length=193, Percent_Identity=30.5699481865285, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI28144897, Length=193, Percent_Identity=30.5699481865285, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI22749187, Length=129, Percent_Identity=34.8837209302326, Blast_Score=72, Evalue=7e-13, Organism=Escherichia coli, GI1786680, Length=217, Percent_Identity=42.8571428571429, Blast_Score=159, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17552384, Length=212, Percent_Identity=39.622641509434, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17567503, Length=185, Percent_Identity=36.7567567567568, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17550688, Length=195, Percent_Identity=29.7435897435897, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17533833, Length=192, Percent_Identity=28.6458333333333, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17537943, Length=199, Percent_Identity=28.1407035175879, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25147457, Length=194, Percent_Identity=24.7422680412371, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6320432, Length=187, Percent_Identity=45.9893048128342, Blast_Score=170, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321018, Length=186, Percent_Identity=38.1720430107527, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6322828, Length=189, Percent_Identity=31.7460317460317, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI22026816, Length=183, Percent_Identity=46.448087431694, Blast_Score=168, Evalue=5e-42, Organism=Drosophila melanogaster, GI17647141, Length=208, Percent_Identity=31.7307692307692, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24663208, Length=208, Percent_Identity=31.7307692307692, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI17737899, Length=215, Percent_Identity=33.4883720930233, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24645822, Length=215, Percent_Identity=33.4883720930233, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI221459597, Length=194, Percent_Identity=27.319587628866, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21356893, Length=194, Percent_Identity=27.319587628866, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 35467; Mature: 35467
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILLGPPGAGKGTQAARLVQQYGLVQLSTGDMLRAAVAAGTPVGLKAKDIMASGGLVP CEEEEECCCCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHCCCCCCCCHHHHHHCCCCCH DEVVIGIISDRIEQPDATNGFILDGFPRTVPQAEALDALLKDKKLGLDAVVELRVNESAL HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHH LARVETRVAEMRERGEEPRADDNAEALAKRLTAYRLQTEPLVEYYSDKRKLLTVDGMMTI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHH DEVTREIGRILEALGEANAKKAAKTAAAKRAVKKSAKPAKASGKPKASGKAKAPGKAPAK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH KASAKKAVSGKSSSKAESAKTASAGLKKPAKATKKTGKKAAKVASKAPAKAAKTAGKKAN HHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH KSKAKSAAKAPKRGAKVTKKAAKKAGTPSAQKARKVNKKRA HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRLILLGPPGAGKGTQAARLVQQYGLVQLSTGDMLRAAVAAGTPVGLKAKDIMASGGLVP CEEEEECCCCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHCCCCCCCCHHHHHHCCCCCH DEVVIGIISDRIEQPDATNGFILDGFPRTVPQAEALDALLKDKKLGLDAVVELRVNESAL HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHH LARVETRVAEMRERGEEPRADDNAEALAKRLTAYRLQTEPLVEYYSDKRKLLTVDGMMTI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHH DEVTREIGRILEALGEANAKKAAKTAAAKRAVKKSAKPAKASGKPKASGKAKAPGKAPAK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH KASAKKAVSGKSSSKAESAKTASAGLKKPAKATKKTGKKAAKVASKAPAKAAKTAGKKAN HHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH KSKAKSAAKAPKRGAKVTKKAAKKAGTPSAQKARKVNKKRA HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA