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The map label for this gene is secY [H]

Identifier: 86749435

GI number: 86749435

Start: 2663752

End: 2665083

Strand: Direct

Name: secY [H]

Synonym: RPB_2315

Alternate gene names: 86749435

Gene position: 2663752-2665083 (Clockwise)

Preceding gene: 86749434

Following gene: 86749436

Centisome position: 49.96

GC content: 63.21

Gene sequence:

>1332_bases
ATGGTCTCTGCAGCGGAACAACTCGCGGCCAACCTCAATTTCTCGGCGCTCGGCAAGGCCGAAGAGCTGAAGAAGCGGAT
CTGGTTCACGCTCGGCGCGCTGCTGGTCTACCGGCTCGGCACCTACATCCCGCTGCCCGGCATCGATCCCACGGTGTGGG
AGCAGGTGTTCAAGTCGCAGGCCGGCGGCATTCTCGGCATGTTCAACATGTTCGCCGGCGGCGGCATCCACCGCATGGCG
ATCTTCGCGCTCAACATCATGCCGTACATCTCGGCATCGATCATCGTGCAGCTCTTGACCACGGTGTCGCCGCAGCTCGA
GGCGCTGAAGAAGGAAGGCGAATCCGGCCGCAAGACGCTGAACCAGTACACCCGCTATCTCACGGTGATCCTGGCGGCGT
TCCAGTCCTACGGCATCGCCGTCGGCCTGCAGGGCGCCGGCAATGTGGTGTCGGAGCCCGGCGCGTTCTTCCTGCTGTCG
ACGGCGATCACGCTGACCGGCGGAACCATGTTCCTGATGTGGCTGGGCGAGCAGATCACTTCGCGCGGCATCGGCAACGG
CATCTCGCTGATCATCCTCGCCGGCATCGTCGCCGAGTTGCCCTCGGCGCTCGCCAGCATGCTCGAACTCGGCCGTCAGG
GCGCGCTGTCGACCGCGCTGATCCTGCTGGTGCTGGTGATGTCGGTCGTCGTCATCGCCTTCATCGTGTTCATGGAGCGG
GCGCAGCGCCGGCTGCTGATCCAGTATCCGAAGCGCCAGGTCGGCAACAAGATGTTCGAGGGCCAGTCCTCGCATCTGCC
GCTGAAGCTCAACACCTCCGGCGTGATCCCGCCGATCTTCGCCTCGTCGCTGCTGCTGCTGCCGACCACGATCGCGAGCT
TCAATTCGGGCACCGGCCCGGAATGGTTCCAGTGGATCGTCACCCAGTTCGGCCACGGCCGGCCGCTGTTCCTGGTGTTC
TACATCGCGATGATCGTGTTCTTCGCGTTCTTCTACACCGCGATCGTGTTCAACCCGACCGAGACCGCGGACAATCTGAA
GAAGCACGGCGGCTTCATCCCGGGCATCCGCCCCGGCGAGCGCACCGCGGAATACATCGACTTCGTGCTGACGCGCATCA
CCGCGGTCGGAGCGATCTATCTGGCGATCGTCTGTCTGATCCCCGAAGTCCTGATTTCCTACGCGGCGGTGCCGTTCTAT
TTCGGCGGAACTTCGCTTCTGATCGTGGTCAGCGTCACGATGGACACGGTCGCCCAGGTGCAGGGCTATCTGCTGGCGCA
TCAGTATGAAGGCCTGATCCGGAAGTCGAAGTTGAGGGGCCGTAAGAAATGA

Upstream 100 bases:

>100_bases
TGGAATTGACGACATTCGCACACCAAATGATGCCCGGCGCTCCCTCGGCGGCCCGCATCCGGCGGCACCACGGGACGAGT
AGCGCGGGAGAAAGCCGGAC

Downstream 100 bases:

>100_bases
GACTGATCCTTCTCGGGCCGCCGGGGGCGGGCAAGGGAACGCAAGCGGCCCGCCTGGTTCAGCAATACGGACTGGTGCAG
CTTTCCACCGGAGACATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MVSAAEQLAANLNFSALGKAEELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWEQVFKSQAGGILGMFNMFAGGGIHRMA
IFALNIMPYISASIIVQLLTTVSPQLEALKKEGESGRKTLNQYTRYLTVILAAFQSYGIAVGLQGAGNVVSEPGAFFLLS
TAITLTGGTMFLMWLGEQITSRGIGNGISLIILAGIVAELPSALASMLELGRQGALSTALILLVLVMSVVVIAFIVFMER
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTIASFNSGTGPEWFQWIVTQFGHGRPLFLVF
YIAMIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERTAEYIDFVLTRITAVGAIYLAIVCLIPEVLISYAAVPFY
FGGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIRKSKLRGRKK

Sequences:

>Translated_443_residues
MVSAAEQLAANLNFSALGKAEELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWEQVFKSQAGGILGMFNMFAGGGIHRMA
IFALNIMPYISASIIVQLLTTVSPQLEALKKEGESGRKTLNQYTRYLTVILAAFQSYGIAVGLQGAGNVVSEPGAFFLLS
TAITLTGGTMFLMWLGEQITSRGIGNGISLIILAGIVAELPSALASMLELGRQGALSTALILLVLVMSVVVIAFIVFMER
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTIASFNSGTGPEWFQWIVTQFGHGRPLFLVF
YIAMIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERTAEYIDFVLTRITAVGAIYLAIVCLIPEVLISYAAVPFY
FGGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIRKSKLRGRKK
>Mature_443_residues
MVSAAEQLAANLNFSALGKAEELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWEQVFKSQAGGILGMFNMFAGGGIHRMA
IFALNIMPYISASIIVQLLTTVSPQLEALKKEGESGRKTLNQYTRYLTVILAAFQSYGIAVGLQGAGNVVSEPGAFFLLS
TAITLTGGTMFLMWLGEQITSRGIGNGISLIILAGIVAELPSALASMLELGRQGALSTALILLVLVMSVVVIAFIVFMER
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTIASFNSGTGPEWFQWIVTQFGHGRPLFLVF
YIAMIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERTAEYIDFVLTRITAVGAIYLAIVCLIPEVLISYAAVPFY
FGGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIRKSKLRGRKK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=434, Percent_Identity=56.9124423963134, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48235; Mature: 48235

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAAEQLAANLNFSALGKAEELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWEQVFKSQ
CCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIVQLLTTVSPQLEALKKEGESGRKTL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVILAAFQSYGIAVGLQGAGNVVSEPGAFFLLSTAITLTGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
SRGIGNGISLIILAGIVAELPSALASMLELGRQGALSTALILLVLVMSVVVIAFIVFMER
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTIASFNSGTGP
HHHHHHHHCCHHHHCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
EWFQWIVTQFGHGRPLFLVFYIAMIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH
RTAEYIDFVLTRITAVGAIYLAIVCLIPEVLISYAAVPFYFGGTSLLIVVSVTMDTVAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHHHHH
QGYLLAHQYEGLIRKSKLRGRKK
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVSAAEQLAANLNFSALGKAEELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWEQVFKSQ
CCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIVQLLTTVSPQLEALKKEGESGRKTL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVILAAFQSYGIAVGLQGAGNVVSEPGAFFLLSTAITLTGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
SRGIGNGISLIILAGIVAELPSALASMLELGRQGALSTALILLVLVMSVVVIAFIVFMER
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTIASFNSGTGP
HHHHHHHHCCHHHHCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
EWFQWIVTQFGHGRPLFLVFYIAMIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH
RTAEYIDFVLTRITAVGAIYLAIVCLIPEVLISYAAVPFYFGGTSLLIVVSVTMDTVAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHHHHH
QGYLLAHQYEGLIRKSKLRGRKK
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA