| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is glnA [H]
Identifier: 86749389
GI number: 86749389
Start: 2619081
End: 2620511
Strand: Direct
Name: glnA [H]
Synonym: RPB_2269
Alternate gene names: 86749389
Gene position: 2619081-2620511 (Clockwise)
Preceding gene: 86749388
Following gene: 86749390
Centisome position: 49.12
GC content: 64.64
Gene sequence:
>1431_bases TTGAGTCTGGTTGAGAAGTACGGGCTCTGGTCCGACGAACAGATCGAGGCTGCCGCGAGGATGCGGCAGACCGCCGAGGA GCATGGTCTCGAGACCATCCGCTTCTCGTTTCCCGATCAGCACGGCATCCTGCGCGGCAAGACGCTGGTGGCGTCCGAAG CGCTGAACTGCCTCGAATCCGGCGCCTCCATCACGACGACGATGCTGGCCAAGGACACTTCGCACAAGACGGTGTTTCCG GTGTTTCAGGCCGGCGGCGGCTTCGGCATGTCGGAGATGCAGGGCGGCGCCGACGCCATCATGCTGCCGGATCCCACGAC ATTCCGCGTGCTGCCTTGGGCGCCGAACACCGGGTGGGTGTTGTGCGATCTGTATTTTGCCAATGGTCGCGCCGTTCCGT TCGCGACGCGCGGGCTGTATCGCTCGGTGCTGCAGAAACTCGCCGATCGCGGCTACGACTACATGGCCGGGCTCGAGGTC GAATTCCACGTCTTCAAGGTCGAGGACGGCAAGATGCGGCCGGAGCACGCCGGCCAGCCCGGCGAGCCGCCCGAAGTCAG CCTGTTGTCGCACGGTTATCAGTATCTCACCGAGCAGCGCTACGATCAGATGGAGCCGGTGCTCGAACTGATCCGCCGCG ATATCGTCGCGCTCGGCCTGCCGCTGCGGTCGATCGAGGTCGAGTTCGGCCCGAGCCAATGCGAGTTCACCTTCCAGCCG ACGGTGGGCTTGATGCCGGCGGACCTGATGGTGCTGTTCCGCAGCGCGGTGAAGCAGATCTGTCGGCGCCACGGCTATCA CGCCACCTTCATGTGCCGCCCGCGTATTCCGAACGTGGTGTCGTCCGGCTGGCATCTGCACCAATGCCTGATCGCGCGTG ACGGCGGCCACAACGCCTTCGTGTCGGAGACGGATGTGCTGTCCGACTTCGGCCGTCACTACCTCGCGGGGCTGCTGCAG CATGCCCGCGCCGCGACCGTGTTCACCACGCCGACGATCAACGGCTACAAGCGCTACCGCTCCTATTCGCTGGCCCCCGA TCGCGCGATCTGGGGACGCGACAATCGCGGCGTGATGCTGCGCGTGCTGGGTGGACCGGGTGATCGCGGCACGCGGATCG AGAACCGGGTCGGCGAGCCTGCGGCAAACCCGTATCTTTACATGGCCTCGCAGATCCTGTCGGGTCTCGACGGCGTCGAC CGCGCGCTCGATCCCGGGCCGTCAGCCGACACGCCCTACGAGACCAAGGCGGATCTTCTGCCCAAATCGCTGCGCGAGGC GATCTTCGCGCTGCGCGACGATCCGTTCTTCCGCACCGCGCTGGGCGACGAGTTCGTCGACTACTACACGTTCATCAAGA ATGCTGAAATCGAGCGCTTTCAGGCCGAAGTGACGGAGTGGGAGCAGCGCGAATATTTCGAAATGTTCTGA
Upstream 100 bases:
>100_bases CCCTGGGCCGCGCCGGTGCCGGCGGAGATCGCCGCCAAGGTGCCGCATCTGACGGCGGCGGAATGAACGTGGGCAAACGA CACGGATCGAGGATCGAGCG
Downstream 100 bases:
>100_bases AGCCGAAATCACGAATTCGACAATCAACAGTGAGGAGAGACGTATGGGTTGGGGATTGCGATCTGTTTATGCACTCGCGG CGGTCTCGTTGATCGCCACC
Product: glutamate--ammonia ligase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSLVEKYGLWSDEQIEAAARMRQTAEEHGLETIRFSFPDQHGILRGKTLVASEALNCLESGASITTTMLAKDTSHKTVFP VFQAGGGFGMSEMQGGADAIMLPDPTTFRVLPWAPNTGWVLCDLYFANGRAVPFATRGLYRSVLQKLADRGYDYMAGLEV EFHVFKVEDGKMRPEHAGQPGEPPEVSLLSHGYQYLTEQRYDQMEPVLELIRRDIVALGLPLRSIEVEFGPSQCEFTFQP TVGLMPADLMVLFRSAVKQICRRHGYHATFMCRPRIPNVVSSGWHLHQCLIARDGGHNAFVSETDVLSDFGRHYLAGLLQ HARAATVFTTPTINGYKRYRSYSLAPDRAIWGRDNRGVMLRVLGGPGDRGTRIENRVGEPAANPYLYMASQILSGLDGVD RALDPGPSADTPYETKADLLPKSLREAIFALRDDPFFRTALGDEFVDYYTFIKNAEIERFQAEVTEWEQREYFEMF
Sequences:
>Translated_476_residues MSLVEKYGLWSDEQIEAAARMRQTAEEHGLETIRFSFPDQHGILRGKTLVASEALNCLESGASITTTMLAKDTSHKTVFP VFQAGGGFGMSEMQGGADAIMLPDPTTFRVLPWAPNTGWVLCDLYFANGRAVPFATRGLYRSVLQKLADRGYDYMAGLEV EFHVFKVEDGKMRPEHAGQPGEPPEVSLLSHGYQYLTEQRYDQMEPVLELIRRDIVALGLPLRSIEVEFGPSQCEFTFQP TVGLMPADLMVLFRSAVKQICRRHGYHATFMCRPRIPNVVSSGWHLHQCLIARDGGHNAFVSETDVLSDFGRHYLAGLLQ HARAATVFTTPTINGYKRYRSYSLAPDRAIWGRDNRGVMLRVLGGPGDRGTRIENRVGEPAANPYLYMASQILSGLDGVD RALDPGPSADTPYETKADLLPKSLREAIFALRDDPFFRTALGDEFVDYYTFIKNAEIERFQAEVTEWEQREYFEMF >Mature_475_residues SLVEKYGLWSDEQIEAAARMRQTAEEHGLETIRFSFPDQHGILRGKTLVASEALNCLESGASITTTMLAKDTSHKTVFPV FQAGGGFGMSEMQGGADAIMLPDPTTFRVLPWAPNTGWVLCDLYFANGRAVPFATRGLYRSVLQKLADRGYDYMAGLEVE FHVFKVEDGKMRPEHAGQPGEPPEVSLLSHGYQYLTEQRYDQMEPVLELIRRDIVALGLPLRSIEVEFGPSQCEFTFQPT VGLMPADLMVLFRSAVKQICRRHGYHATFMCRPRIPNVVSSGWHLHQCLIARDGGHNAFVSETDVLSDFGRHYLAGLLQH ARAATVFTTPTINGYKRYRSYSLAPDRAIWGRDNRGVMLRVLGGPGDRGTRIENRVGEPAANPYLYMASQILSGLDGVDR ALDPGPSADTPYETKADLLPKSLREAIFALRDDPFFRTALGDEFVDYYTFIKNAEIERFQAEVTEWEQREYFEMF
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=462, Percent_Identity=27.0562770562771, Blast_Score=170, Evalue=3e-42, Organism=Escherichia coli, GI87081870, Length=440, Percent_Identity=26.5909090909091, Blast_Score=111, Evalue=9e-26, Organism=Escherichia coli, GI1790301, Length=228, Percent_Identity=32.4561403508772, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 53490; Mature: 53359
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVEKYGLWSDEQIEAAARMRQTAEEHGLETIRFSFPDQHGILRGKTLVASEALNCLES CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHC GASITTTMLAKDTSHKTVFPVFQAGGGFGMSEMQGGADAIMLPDPTTFRVLPWAPNTGWV CCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCEEECCCCCCEEEEECCCCCCEE LCDLYFANGRAVPFATRGLYRSVLQKLADRGYDYMAGLEVEFHVFKVEDGKMRPEHAGQP EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEEECCCCCCCHHCCCC GEPPEVSLLSHGYQYLTEQRYDQMEPVLELIRRDIVALGLPLRSIEVEFGPSQCEFTFQP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECC TVGLMPADLMVLFRSAVKQICRRHGYHATFMCRPRIPNVVSSGWHLHQCLIARDGGHNAF CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCEEEEEEEEECCCCCCC VSETDVLSDFGRHYLAGLLQHARAATVFTTPTINGYKRYRSYSLAPDRAIWGRDNRGVML CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCEEE RVLGGPGDRGTRIENRVGEPAANPYLYMASQILSGLDGVDRALDPGPSADTPYETKADLL EEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH PKSLREAIFALRDDPFFRTALGDEFVDYYTFIKNAEIERFQAEVTEWEQREYFEMF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLVEKYGLWSDEQIEAAARMRQTAEEHGLETIRFSFPDQHGILRGKTLVASEALNCLES CCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHC GASITTTMLAKDTSHKTVFPVFQAGGGFGMSEMQGGADAIMLPDPTTFRVLPWAPNTGWV CCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCEEECCCCCCEEEEECCCCCCEE LCDLYFANGRAVPFATRGLYRSVLQKLADRGYDYMAGLEVEFHVFKVEDGKMRPEHAGQP EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEEECCCCCCCHHCCCC GEPPEVSLLSHGYQYLTEQRYDQMEPVLELIRRDIVALGLPLRSIEVEFGPSQCEFTFQP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECC TVGLMPADLMVLFRSAVKQICRRHGYHATFMCRPRIPNVVSSGWHLHQCLIARDGGHNAF CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCEEEEEEEEECCCCCCC VSETDVLSDFGRHYLAGLLQHARAATVFTTPTINGYKRYRSYSLAPDRAIWGRDNRGVML CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCEEE RVLGGPGDRGTRIENRVGEPAANPYLYMASQILSGLDGVDRALDPGPSADTPYETKADLL EEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH PKSLREAIFALRDDPFFRTALGDEFVDYYTFIKNAEIERFQAEVTEWEQREYFEMF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7916055 [H]