Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is livJ [C]

Identifier: 86749390

GI number: 86749390

Start: 2620555

End: 2621730

Strand: Direct

Name: livJ [C]

Synonym: RPB_2270

Alternate gene names: 86749390

Gene position: 2620555-2621730 (Clockwise)

Preceding gene: 86749389

Following gene: 86749391

Centisome position: 49.15

GC content: 64.03

Gene sequence:

>1176_bases
ATGGGTTGGGGATTGCGATCTGTTTATGCACTCGCGGCGGTCTCGTTGATCGCCACCGGCGCGCGCGCCGACACCATCAA
GGTCGGCGTCATCGGCACGATGTCCGGGCCCTATGCGCTGTTCGGCAAGAACTACAAGATGGGCATCGACGCTTGGGTCG
CCGAGCACGGCAACAAGGTCGCCGGGCACACCGTCGAGTTCGTGTACCGCGACGAGGTCTCGCCGAATCCGGCGCAGTCG
AAGGCGCTGGCGCAGGAGCTGATCGTCAAGGAGAAGGTGCAGTATCTCGCCGGCCTGTATTTCACGCCGAACGCGATGGC
GGTGGCGCCGCTGTTGCAGGAGGCCAAGGTGCCGATGGTGGTGATGAACGCGGCGACGTCGTCGATCACCGAGAAGAGCC
CTTACATCGTCCGCACCTCGTTCACGATGTTCCAGAACACCGTGCCGGCGGCGAAGGTCGCCAAGCAGAAGGGTGCCACC
AAGGTCGCGATCGCGGTCAGCGATTACGGTCCGGGCATCGACGCCGAAACCGCGTTCAAGAAGACGTTCGAAGCCGAGGG
TGGCAAGGTCGTCGAGGCGGTGCGGATGCCGCTCAGCACCACGGATTTCGGACCGATCATGCAGCGGATCAAGAATTCCG
GCGCCGACATGATCTTCACGTTCTTGCCGGCCGGGCCGCCGACGCTCGGCTTCGTCAAGGCCTATATCGACAACGGGCTG
AAGGCGGGCGGCGTCAAGCTGATGTCGACCGGCGACGTCGTCACCGAGCCCGATCTGCCGAACATCGGCGAAGCCGGCCT
CGGCATCCTGTCGACCTATCACTACGCGGTGTCGCACGACTCGCCGGAAAACAAGGCCTTCCTGGCCCTGCTCCAGAAGG
GCGGTGCCAAGCTCGACGAAGTCACCATGACGTCGGTCGCGGCCTATGACGGCGCGCGGCTGATCTACAAGATGATCGAG
GCGACCTCCGGCAAGAGCGATCCGGACAAGGCGATCGCGGCGGTCAAGGGCATGAAGTGGGTGAGCCCGCGCGGCGAGGT
GTCGATCGATCCGGAGACCCGCCACATCACGCAGAACGTCTATCTGCGCGAGGTCGAGAAGGTCGACGGCAAGCTGATCA
ACAGGGAGCTGGAAACCTTCAAGGCGCAGCCCGACTGGGGCCTCGCCAAGCAGTGA

Upstream 100 bases:

>100_bases
CGCTTTCAGGCCGAAGTGACGGAGTGGGAGCAGCGCGAATATTTCGAAATGTTCTGAAGCCGAAATCACGAATTCGACAA
TCAACAGTGAGGAGAGACGT

Downstream 100 bases:

>100_bases
TCTGGACCGCCCGCCGCACTGGAATGCGGCGGGCGTTCTCTGTAACAGGGGCGGGCGGCCACGCGGCCGCTCCGACAGCA
CCAGGACGAGGGCCGGGTTG

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MGWGLRSVYALAAVSLIATGARADTIKVGVIGTMSGPYALFGKNYKMGIDAWVAEHGNKVAGHTVEFVYRDEVSPNPAQS
KALAQELIVKEKVQYLAGLYFTPNAMAVAPLLQEAKVPMVVMNAATSSITEKSPYIVRTSFTMFQNTVPAAKVAKQKGAT
KVAIAVSDYGPGIDAETAFKKTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAGPPTLGFVKAYIDNGL
KAGGVKLMSTGDVVTEPDLPNIGEAGLGILSTYHYAVSHDSPENKAFLALLQKGGAKLDEVTMTSVAAYDGARLIYKMIE
ATSGKSDPDKAIAAVKGMKWVSPRGEVSIDPETRHITQNVYLREVEKVDGKLINRELETFKAQPDWGLAKQ

Sequences:

>Translated_391_residues
MGWGLRSVYALAAVSLIATGARADTIKVGVIGTMSGPYALFGKNYKMGIDAWVAEHGNKVAGHTVEFVYRDEVSPNPAQS
KALAQELIVKEKVQYLAGLYFTPNAMAVAPLLQEAKVPMVVMNAATSSITEKSPYIVRTSFTMFQNTVPAAKVAKQKGAT
KVAIAVSDYGPGIDAETAFKKTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAGPPTLGFVKAYIDNGL
KAGGVKLMSTGDVVTEPDLPNIGEAGLGILSTYHYAVSHDSPENKAFLALLQKGGAKLDEVTMTSVAAYDGARLIYKMIE
ATSGKSDPDKAIAAVKGMKWVSPRGEVSIDPETRHITQNVYLREVEKVDGKLINRELETFKAQPDWGLAKQ
>Mature_390_residues
GWGLRSVYALAAVSLIATGARADTIKVGVIGTMSGPYALFGKNYKMGIDAWVAEHGNKVAGHTVEFVYRDEVSPNPAQSK
ALAQELIVKEKVQYLAGLYFTPNAMAVAPLLQEAKVPMVVMNAATSSITEKSPYIVRTSFTMFQNTVPAAKVAKQKGATK
VAIAVSDYGPGIDAETAFKKTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAGPPTLGFVKAYIDNGLK
AGGVKLMSTGDVVTEPDLPNIGEAGLGILSTYHYAVSHDSPENKAFLALLQKGGAKLDEVTMTSVAAYDGARLIYKMIEA
TSGKSDPDKAIAAVKGMKWVSPRGEVSIDPETRHITQNVYLREVEKVDGKLINRELETFKAQPDWGLAKQ

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 41900; Mature: 41769

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWGLRSVYALAAVSLIATGARADTIKVGVIGTMSGPYALFGKNYKMGIDAWVAEHGNKV
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCEECCHHHHHHHCCCCC
AGHTVEFVYRDEVSPNPAQSKALAQELIVKEKVQYLAGLYFTPNAMAVAPLLQEAKVPMV
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHCCCCEE
VMNAATSSITEKSPYIVRTSFTMFQNTVPAAKVAKQKGATKVAIAVSDYGPGIDAETAFK
EEECCHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHH
KTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAGPPTLGFVKAYIDNGL
HHHHCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC
KAGGVKLMSTGDVVTEPDLPNIGEAGLGILSTYHYAVSHDSPENKAFLALLQKGGAKLDE
CCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCHH
VTMTSVAAYDGARLIYKMIEATSGKSDPDKAIAAVKGMKWVSPRGEVSIDPETRHITQNV
HHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCEEECCCHHHHHHHH
YLREVEKVDGKLINRELETFKAQPDWGLAKQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GWGLRSVYALAAVSLIATGARADTIKVGVIGTMSGPYALFGKNYKMGIDAWVAEHGNKV
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCEECCHHHHHHHCCCCC
AGHTVEFVYRDEVSPNPAQSKALAQELIVKEKVQYLAGLYFTPNAMAVAPLLQEAKVPMV
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHCCCCEE
VMNAATSSITEKSPYIVRTSFTMFQNTVPAAKVAKQKGATKVAIAVSDYGPGIDAETAFK
EEECCHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHH
KTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAGPPTLGFVKAYIDNGL
HHHHCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC
KAGGVKLMSTGDVVTEPDLPNIGEAGLGILSTYHYAVSHDSPENKAFLALLQKGGAKLDE
CCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCHH
VTMTSVAAYDGARLIYKMIEATSGKSDPDKAIAAVKGMKWVSPRGEVSIDPETRHITQNV
HHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCEEECCCHHHHHHHH
YLREVEKVDGKLINRELETFKAQPDWGLAKQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA