| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749364
Identifier: 86749364
GI number: 86749364
Start: 2574227
End: 2575213
Strand: Direct
Name: 86749364
Synonym: RPB_2244
Alternate gene names: NA
Gene position: 2574227-2575213 (Clockwise)
Preceding gene: 86749363
Following gene: 86749365
Centisome position: 48.28
GC content: 67.07
Gene sequence:
>987_bases ATGTTGCGGATCGATCAGCCGCGGGTTTTCCCGCGCGCGCTGGGGCTTGCGCTTGCCCTCTCGGTTGGGACCCTGCTCGG CGGTACGTCGCCGGCGGACGCCCGAACCAAAAGGCCGTCATCCGAGCCAGCGATCGACAGTTCGCTGCCGATGACCGCGC CGCACGTCCGATTCTTTACCATCAATGCGGTGCTCGCCAAACACGATGGCATGCGAAAGTCGGCTTCGGGCCCGGTCGAA CTGGCTTCGACCGATCCGGCGTCGCGTTCGGCAGTCGCCAGCGACGCGCCGGTCTTGCCGGCGATCGAGGCCCCCACCGA CGAGCCGTTCGGTCTGATGACCTTCCGCGCCCCGGAGGGCGTGTTGTGGACCAAGTGGCGCGCCGTCAAGGCTGCGATGG ATGCGGATGCCGGATCGATCGTCCGCTGCAATAGCGACGACTCCCGCTGCTCACCATCGGAACGTCGTTTCACCGCGTTG ATGCGCGGCGCGCGGGACGCAAGTGATGCGAGGGCTCGCGCCGAGCTCGTCAACCGCGCCGTCAATCAAGCGGTGCGCTA CGTCAACGACTATCAGCAGCACGGCGTCGCCGATCTGTGGACGTCGCCACTGCAGACGTTGCGGAGCGGCATCGGCGATT GCGAGGACTACGCCATCGCCAAATACGCGTTGCTGCGCTCGGCGGGCGCCGACGAGGCCGATCTGAAACTGGTGCTGGTG CGCGACCTTGCCGTACGCCAGGACCATGCGGTGCTGGCGGTGCGGCTCGACGGCCGCTGGCTCGTGCTCGACAATCGCCG CTCGTCGCTGCTGGAAGGCCGCGATCTGCAATCCTTCATGCCGTTGTTCGCGATCGATCATCGCGGCGTCAGCCTGTTCG CCGCGCCATACGCCGCGCGCCCGCACCACGAGAGCGAGAGCGATATGGCGCCGGCGGCGGATGTCGAGGTGGCCGGCGGA AGCTCCTCGTTGCCGTTTCAGCTTTGA
Upstream 100 bases:
>100_bases GTTGAAGCGGTGCCGGCCTTATTCCTGATCCCACCAGATCCGGGACGGGGATCGACGCGATGACGTCGGCCGACGCTCCG GACAAAACGGGGCGTCAGGT
Downstream 100 bases:
>100_bases CAAGGCGGGAAAGCTGCGCACGGCTGCCTACCCCGCTTGTACTCGCTGCTGATTTGCGGTCTTAATTGAACGCAGCGCGG TATCCGGGCAGGGGGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MLRIDQPRVFPRALGLALALSVGTLLGGTSPADARTKRPSSEPAIDSSLPMTAPHVRFFTINAVLAKHDGMRKSASGPVE LASTDPASRSAVASDAPVLPAIEAPTDEPFGLMTFRAPEGVLWTKWRAVKAAMDADAGSIVRCNSDDSRCSPSERRFTAL MRGARDASDARARAELVNRAVNQAVRYVNDYQQHGVADLWTSPLQTLRSGIGDCEDYAIAKYALLRSAGADEADLKLVLV RDLAVRQDHAVLAVRLDGRWLVLDNRRSSLLEGRDLQSFMPLFAIDHRGVSLFAAPYAARPHHESESDMAPAADVEVAGG SSSLPFQL
Sequences:
>Translated_328_residues MLRIDQPRVFPRALGLALALSVGTLLGGTSPADARTKRPSSEPAIDSSLPMTAPHVRFFTINAVLAKHDGMRKSASGPVE LASTDPASRSAVASDAPVLPAIEAPTDEPFGLMTFRAPEGVLWTKWRAVKAAMDADAGSIVRCNSDDSRCSPSERRFTAL MRGARDASDARARAELVNRAVNQAVRYVNDYQQHGVADLWTSPLQTLRSGIGDCEDYAIAKYALLRSAGADEADLKLVLV RDLAVRQDHAVLAVRLDGRWLVLDNRRSSLLEGRDLQSFMPLFAIDHRGVSLFAAPYAARPHHESESDMAPAADVEVAGG SSSLPFQL >Mature_328_residues MLRIDQPRVFPRALGLALALSVGTLLGGTSPADARTKRPSSEPAIDSSLPMTAPHVRFFTINAVLAKHDGMRKSASGPVE LASTDPASRSAVASDAPVLPAIEAPTDEPFGLMTFRAPEGVLWTKWRAVKAAMDADAGSIVRCNSDDSRCSPSERRFTAL MRGARDASDARARAELVNRAVNQAVRYVNDYQQHGVADLWTSPLQTLRSGIGDCEDYAIAKYALLRSAGADEADLKLVLV RDLAVRQDHAVLAVRLDGRWLVLDNRRSSLLEGRDLQSFMPLFAIDHRGVSLFAAPYAARPHHESESDMAPAADVEVAGG SSSLPFQL
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35352; Mature: 35352
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIDQPRVFPRALGLALALSVGTLLGGTSPADARTKRPSSEPAIDSSLPMTAPHVRFFT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE INAVLAKHDGMRKSASGPVELASTDPASRSAVASDAPVLPAIEAPTDEPFGLMTFRAPEG EEEHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC VLWTKWRAVKAAMDADAGSIVRCNSDDSRCSPSERRFTALMRGARDASDARARAELVNRA CEEHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VNQAVRYVNDYQQHGVADLWTSPLQTLRSGIGDCEDYAIAKYALLRSAGADEADLKLVLV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE RDLAVRQDHAVLAVRLDGRWLVLDNRRSSLLEGRDLQSFMPLFAIDHRGVSLFAAPYAAR EHHHHCCCCEEEEEEECCEEEEEECCHHHHHCCCCHHHHHHHHEECCCCCEEEECCCCCC PHHESESDMAPAADVEVAGGSSSLPFQL CCCCCCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MLRIDQPRVFPRALGLALALSVGTLLGGTSPADARTKRPSSEPAIDSSLPMTAPHVRFFT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE INAVLAKHDGMRKSASGPVELASTDPASRSAVASDAPVLPAIEAPTDEPFGLMTFRAPEG EEEHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC VLWTKWRAVKAAMDADAGSIVRCNSDDSRCSPSERRFTALMRGARDASDARARAELVNRA CEEHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VNQAVRYVNDYQQHGVADLWTSPLQTLRSGIGDCEDYAIAKYALLRSAGADEADLKLVLV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE RDLAVRQDHAVLAVRLDGRWLVLDNRRSSLLEGRDLQSFMPLFAIDHRGVSLFAAPYAAR EHHHHCCCCEEEEEEECCEEEEEECCHHHHHCCCCHHHHHHHHEECCCCCEEEECCCCCC PHHESESDMAPAADVEVAGGSSSLPFQL CCCCCCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA