| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is aprE [H]
Identifier: 86749363
GI number: 86749363
Start: 2572670
End: 2574004
Strand: Direct
Name: aprE [H]
Synonym: RPB_2243
Alternate gene names: 86749363
Gene position: 2572670-2574004 (Clockwise)
Preceding gene: 86749362
Following gene: 86749364
Centisome position: 48.25
GC content: 64.79
Gene sequence:
>1335_bases ATGGCGCAAACCGATTTCGCCTTTTCCAACGACGTCCGCGCAGCCGTCGAGCTACGCACGCCGAAAACGGCGCGGATGTT GCTGTCTGCATCTTTGGCGCTGTTCTTCACCTTCTTGGCCTGGGCGCATTTCGCCGTGCTCGACGAGGTCAAGCGCGGCA ACGGCAAGGTGGTGCCGTCGCGGCAAACCCAAGTGGTCCAGTCGCTCGAAGGCGGCATCATCGCCGAACTGCTGGTTCAA GAAGGTGCGATCGTCGACAAGGATCAGCCGCTGGCGCGCATCGAGGACACCAACTTCGCGGCACAGTTCGGCGAGATCCG CGAACGTCGTGGCGCGATGGGGGCGCGTGTCCTGCGGCTCGAGGCCGAGACCGAGGGCCGCGCCAGCGTCGTGTTTCCCG CCGAACTGATGCAGGTCGCGCCGCGCGCGGTCGAAGCCGAGCGTCTGGTGTTCGAGGCGCACAACCGCAAGTTGGCGCAG GATATCGACGTCGTCCAGCAGCAGGAGATCCAGAAGACCAAGGAGATCGACGAGCTGCGCGCCAGCGAGAAACGCTTCTC CGAGACGCTGACCCTGCTCAACCGCGAGATCGCGCTGACCCGCAAGCTCTACGATCAGAAGGTGGTGCCGGAGATCGAGA TGCTGCGAGCCGATCGGCAGGCCACCGACATGCGCGGCCAACTCGCGGTGGTGCAGGCGACCATCATCAAGACCCAGGCG GCGGTTCAGGAGGCGCGGTCGCGCCGGCTCAACATCACCACGGCGTTCCGCGCCCAGGCCGAGGACGATCTCGCCAAATC CCGCGGCGATCTCGCCGTGCTGGACGAGAACATCAAGTCGGCGAAGGATCGCGTCCGCCGCACCGAGCTGCGCTCGCCGG TGCATGGCGTCGTCAACAAGCTGAATATCACCACGATCGGTGCCGTCGTCGCCCCCGGCGCGAGTCTGATGGAAATCGTG CCGCTCGACGACACGCTGCTGGTCGAAGGCCGCATCCGCCCGCAGGACATCGCCTTCATTCGCCCCGATCACGAGGCGGT GGTGAAGCTGAGCGCCTACGATTCATCGGTCTACGGATCGCTGCACGGCCGCGTCGAGCGGATCAGCGCCGACACCATCA CCGACGAAAAGGGTGACAAGAACGAGCGCGGCGAGACGTTTTACCGGGTGATGGTGCGGACCGAGAAGAACCATCTCGGC ACCAATGAACAGCCGCTGCCGATCATTCCGGGCATGGTGGCCACGGTCGAGATTCTCACCGGCAAGAAGTCGGTGCTGGA CTATCTGATCAAGCCGGCGCGCACCCTGCGAGACGAAGCGCTCCGCGAACGCTGA
Upstream 100 bases:
>100_bases AAGATCGTCGCCGACGGACCGACCGAGCAGATCTTGACGAAGCTGCGTCCGCAACCGGCCGCGGCTCCGGCCGCTGCCGG GCGAATCTGAGGGCGAAAAA
Downstream 100 bases:
>100_bases GGCAGCGCAGGCGGCGACGGCATCGTCAACAAATCCTGAATCGGTAAAATTCGACGCGATCGGGTGGTACGCGATTAGTT GCGTTCCCAACTCGGCGCAA
Product: Type I secretion membrane fusion protein, HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MAQTDFAFSNDVRAAVELRTPKTARMLLSASLALFFTFLAWAHFAVLDEVKRGNGKVVPSRQTQVVQSLEGGIIAELLVQ EGAIVDKDQPLARIEDTNFAAQFGEIRERRGAMGARVLRLEAETEGRASVVFPAELMQVAPRAVEAERLVFEAHNRKLAQ DIDVVQQQEIQKTKEIDELRASEKRFSETLTLLNREIALTRKLYDQKVVPEIEMLRADRQATDMRGQLAVVQATIIKTQA AVQEARSRRLNITTAFRAQAEDDLAKSRGDLAVLDENIKSAKDRVRRTELRSPVHGVVNKLNITTIGAVVAPGASLMEIV PLDDTLLVEGRIRPQDIAFIRPDHEAVVKLSAYDSSVYGSLHGRVERISADTITDEKGDKNERGETFYRVMVRTEKNHLG TNEQPLPIIPGMVATVEILTGKKSVLDYLIKPARTLRDEALRER
Sequences:
>Translated_444_residues MAQTDFAFSNDVRAAVELRTPKTARMLLSASLALFFTFLAWAHFAVLDEVKRGNGKVVPSRQTQVVQSLEGGIIAELLVQ EGAIVDKDQPLARIEDTNFAAQFGEIRERRGAMGARVLRLEAETEGRASVVFPAELMQVAPRAVEAERLVFEAHNRKLAQ DIDVVQQQEIQKTKEIDELRASEKRFSETLTLLNREIALTRKLYDQKVVPEIEMLRADRQATDMRGQLAVVQATIIKTQA AVQEARSRRLNITTAFRAQAEDDLAKSRGDLAVLDENIKSAKDRVRRTELRSPVHGVVNKLNITTIGAVVAPGASLMEIV PLDDTLLVEGRIRPQDIAFIRPDHEAVVKLSAYDSSVYGSLHGRVERISADTITDEKGDKNERGETFYRVMVRTEKNHLG TNEQPLPIIPGMVATVEILTGKKSVLDYLIKPARTLRDEALRER >Mature_443_residues AQTDFAFSNDVRAAVELRTPKTARMLLSASLALFFTFLAWAHFAVLDEVKRGNGKVVPSRQTQVVQSLEGGIIAELLVQE GAIVDKDQPLARIEDTNFAAQFGEIRERRGAMGARVLRLEAETEGRASVVFPAELMQVAPRAVEAERLVFEAHNRKLAQD IDVVQQQEIQKTKEIDELRASEKRFSETLTLLNREIALTRKLYDQKVVPEIEMLRADRQATDMRGQLAVVQATIIKTQAA VQEARSRRLNITTAFRAQAEDDLAKSRGDLAVLDENIKSAKDRVRRTELRSPVHGVVNKLNITTIGAVVAPGASLMEIVP LDDTLLVEGRIRPQDIAFIRPDHEAVVKLSAYDSSVYGSLHGRVERISADTITDEKGDKNERGETFYRVMVRTEKNHLGT NEQPLPIIPGMVATVEILTGKKSVLDYLIKPARTLRDEALRER
Specific function: Involved in the secretion of alkaline protease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 49575; Mature: 49444
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTDFAFSNDVRAAVELRTPKTARMLLSASLALFFTFLAWAHFAVLDEVKRGNGKVVPS CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RQTQVVQSLEGGIIAELLVQEGAIVDKDQPLARIEDTNFAAQFGEIRERRGAMGARVLRL HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEEE EAETEGRASVVFPAELMQVAPRAVEAERLVFEAHNRKLAQDIDVVQQQEIQKTKEIDELR EECCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ASEKRFSETLTLLNREIALTRKLYDQKVVPEIEMLRADRQATDMRGQLAVVQATIIKTQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHH AVQEARSRRLNITTAFRAQAEDDLAKSRGDLAVLDENIKSAKDRVRRTELRSPVHGVVNK HHHHHHHCEEEEEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH LNITTIGAVVAPGASLMEIVPLDDTLLVEGRIRPQDIAFIRPDHEAVVKLSAYDSSVYGS CCCEEEHHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEECCCHHHEEEEEECCCHHHHH LHGRVERISADTITDEKGDKNERGETFYRVMVRTEKNHLGTNEQPLPIIPGMVATVEILT HHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHC GKKSVLDYLIKPARTLRDEALRER CHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQTDFAFSNDVRAAVELRTPKTARMLLSASLALFFTFLAWAHFAVLDEVKRGNGKVVPS CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RQTQVVQSLEGGIIAELLVQEGAIVDKDQPLARIEDTNFAAQFGEIRERRGAMGARVLRL HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEEE EAETEGRASVVFPAELMQVAPRAVEAERLVFEAHNRKLAQDIDVVQQQEIQKTKEIDELR EECCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ASEKRFSETLTLLNREIALTRKLYDQKVVPEIEMLRADRQATDMRGQLAVVQATIIKTQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHH AVQEARSRRLNITTAFRAQAEDDLAKSRGDLAVLDENIKSAKDRVRRTELRSPVHGVVNK HHHHHHHCEEEEEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH LNITTIGAVVAPGASLMEIVPLDDTLLVEGRIRPQDIAFIRPDHEAVVKLSAYDSSVYGS CCCEEEHHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEECCCHHHEEEEEECCCHHHHH LHGRVERISADTITDEKGDKNERGETFYRVMVRTEKNHLGTNEQPLPIIPGMVATVEILT HHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHC GKKSVLDYLIKPARTLRDEALRER CHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]