Click here to switch to the map view.

The map label for this gene is bepC [H]

Identifier: 86749361

GI number: 86749361

Start: 2568705

End: 2570279

Strand: Direct

Name: bepC [H]

Synonym: RPB_2241

Alternate gene names: 86749361

Gene position: 2568705-2570279 (Clockwise)

Preceding gene: 86749360

Following gene: 86749362

Centisome position: 48.18

GC content: 64.51

Gene sequence:

>1575_bases
ATGTTGAAAAGCGCTCAGATTGCCATTTTTGCAACCGTCGTCGGGCTGGTTTCGAGCCCCGCCGCTCTTGCGGCGGAGCC
GTTCACGATTTTGGACGCCATCAACCAGGCGGTGAAAACCAACCCCGGCGTCGGCGAGGCGGCAGCCAACCGTCGCGCGA
CGGAGGCCGAGTTGCGGCAGAGTCAGGGGACCTTGCTACCGCAGGTTCGGCTCGAAGCCAGCGCTGGCCCGGAGATGCTG
AAGCAATACGTGTCTCCAGCGCCGCTCAACAACGACGTCTATCTGCGCGGACGTCAGGCCGGTGTCGTGGTTCGGCAGCT
GCTGTTCGATGGGTTTGCCTCGATCAACGAAGTCTGGCGGCAGGCGGCTCGCGTCGACGCCGCGGCGTTCCGGGTGTTGG
AGCGCACCGAACTGATCGGGCTCGATGCCGCCGAAGCTTATATCGATGTGGCGCGCTACACGCGGCTGGTTGGACTCGCC
GAACAGAATCTCAAGGTCCATCTCGAATTGCGCAAGAACGTGTTGGCGCGCTTCGAGGGTGGTCGGGCCGGCGAGGGCGA
CACGCAGCAAGCGGAAGAACGCGTCGCTGCAGCGCAGGCCGTGGCGGCGGAGTTCCATCTCAGCCTCGAGACGGCGCGCG
CCAAGTTCCGCAAGGTCGTCGGCCTCGAGCCGTACAATCTGCGCTTCCCCGGCCGTCTCGCGGATCTGCCTAAGAACAAG
GCCGCATCGCTCGACATCGCCTACAAGTTCAATCCGACGCTGCGCGCCGCGGGCGCCGACGTGGTCGCGGCCAAGCGCGG
CTTCGATGCCACAACCGGCGCGTTCCTTCCGACGCTGTCGCTGGAAGGCCGCGCCTCGCGCGGCAAGGAGTCGATCCTCT
ACAACAATCAGTACGACCAGGTCAGCGGCAAGCTGGTGGCGTCCTGGGATATCTTCAACGGCGGCCAGAGCAGCTGGAAG
CGTGAAGAAGCTGCACAGCGGATGATCGAGGAGCAGCAGCGTCAGGCTCGGCTGCAGCGCGATGCGCTGGAATCGATCGA
CAAGGCCTGGGCCGCGCGGACCATCACCAACGACCGCGTCGCAGCGCTCGTTCGCGACGTCGAGGCCGCGCGCCGGACCT
TCATCGCCTACAATAAGGAATACGAGCTCGGCCAGCGCACGCTGATCGATCTGCTCAACTCGCAGAACCAGTATTTCAAC
GCCAATGTGTCGCTGGTTTCGGCGCGCGGAGTTGCGGTGTTCGCCGACTATCAGCTTCTCGCCACGATGGGGCAGATGCT
GAACTATCTGAAGACCGGTCATCCGCCGGAGACCGAGTTGGTCGACGTGCATCCGAGCGGGTTCATCGGCTACAAGCTCG
CGCCCATCCGGCTTGCGCCCCCGTCGCCCGGTCCGGAACCGCTCAGCACTGTGCCGCCGGTGCCGCTGTTCGGGTTCTTT
TTCAACGGCCCGCCGAAATTGCCGACCGTGATCAATTTCGACGATCGCTGGGCGTCTCATGAGGTCGCCGAGAGTAGCGC
GCTGTTCGTTGCAGCCGGAACCTACGGTCGCAGCGCGCAGGCCGGCGCCAAGTAA

Upstream 100 bases:

>100_bases
TGAAGGGGCGAGTCGCGCTTTTGCCACACCTCGACCTCATTTCGCCTCATCCCCGCCGCATCCATTGCGTGTGGGTTCCA
AGCTTGTTAGCACTTACTCC

Downstream 100 bases:

>100_bases
GGGCCAGCAGGCCGCAGGCCTGCTGGACGCGAAAACCCCGCGATTTACCCTAACGCCAGTTCGACACGCGCCGGGCGATC
GAGACGGGGTGCAAACCTCA

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MLKSAQIAIFATVVGLVSSPAALAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQSQGTLLPQVRLEASAGPEML
KQYVSPAPLNNDVYLRGRQAGVVVRQLLFDGFASINEVWRQAARVDAAAFRVLERTELIGLDAAEAYIDVARYTRLVGLA
EQNLKVHLELRKNVLARFEGGRAGEGDTQQAEERVAAAQAVAAEFHLSLETARAKFRKVVGLEPYNLRFPGRLADLPKNK
AASLDIAYKFNPTLRAAGADVVAAKRGFDATTGAFLPTLSLEGRASRGKESILYNNQYDQVSGKLVASWDIFNGGQSSWK
REEAAQRMIEEQQRQARLQRDALESIDKAWAARTITNDRVAALVRDVEAARRTFIAYNKEYELGQRTLIDLLNSQNQYFN
ANVSLVSARGVAVFADYQLLATMGQMLNYLKTGHPPETELVDVHPSGFIGYKLAPIRLAPPSPGPEPLSTVPPVPLFGFF
FNGPPKLPTVINFDDRWASHEVAESSALFVAAGTYGRSAQAGAK

Sequences:

>Translated_524_residues
MLKSAQIAIFATVVGLVSSPAALAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQSQGTLLPQVRLEASAGPEML
KQYVSPAPLNNDVYLRGRQAGVVVRQLLFDGFASINEVWRQAARVDAAAFRVLERTELIGLDAAEAYIDVARYTRLVGLA
EQNLKVHLELRKNVLARFEGGRAGEGDTQQAEERVAAAQAVAAEFHLSLETARAKFRKVVGLEPYNLRFPGRLADLPKNK
AASLDIAYKFNPTLRAAGADVVAAKRGFDATTGAFLPTLSLEGRASRGKESILYNNQYDQVSGKLVASWDIFNGGQSSWK
REEAAQRMIEEQQRQARLQRDALESIDKAWAARTITNDRVAALVRDVEAARRTFIAYNKEYELGQRTLIDLLNSQNQYFN
ANVSLVSARGVAVFADYQLLATMGQMLNYLKTGHPPETELVDVHPSGFIGYKLAPIRLAPPSPGPEPLSTVPPVPLFGFF
FNGPPKLPTVINFDDRWASHEVAESSALFVAAGTYGRSAQAGAK
>Mature_524_residues
MLKSAQIAIFATVVGLVSSPAALAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQSQGTLLPQVRLEASAGPEML
KQYVSPAPLNNDVYLRGRQAGVVVRQLLFDGFASINEVWRQAARVDAAAFRVLERTELIGLDAAEAYIDVARYTRLVGLA
EQNLKVHLELRKNVLARFEGGRAGEGDTQQAEERVAAAQAVAAEFHLSLETARAKFRKVVGLEPYNLRFPGRLADLPKNK
AASLDIAYKFNPTLRAAGADVVAAKRGFDATTGAFLPTLSLEGRASRGKESILYNNQYDQVSGKLVASWDIFNGGQSSWK
REEAAQRMIEEQQRQARLQRDALESIDKAWAARTITNDRVAALVRDVEAARRTFIAYNKEYELGQRTLIDLLNSQNQYFN
ANVSLVSARGVAVFADYQLLATMGQMLNYLKTGHPPETELVDVHPSGFIGYKLAPIRLAPPSPGPEPLSTVPPVPLFGFF
FNGPPKLPTVINFDDRWASHEVAESSALFVAAGTYGRSAQAGAK

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 57092; Mature: 57092

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSAQIAIFATVVGLVSSPAALAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQ
CCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
SQGTLLPQVRLEASAGPEMLKQYVSPAPLNNDVYLRGRQAGVVVRQLLFDGFASINEVWR
HCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
QAARVDAAAFRVLERTELIGLDAAEAYIDVARYTRLVGLAEQNLKVHLELRKNVLARFEG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCC
GRAGEGDTQQAEERVAAAQAVAAEFHLSLETARAKFRKVVGLEPYNLRFPGRLADLPKNK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
AASLDIAYKFNPTLRAAGADVVAAKRGFDATTGAFLPTLSLEGRASRGKESILYNNQYDQ
CCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCHHH
VSGKLVASWDIFNGGQSSWKREEAAQRMIEEQQRQARLQRDALESIDKAWAARTITNDRV
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AALVRDVEAARRTFIAYNKEYELGQRTLIDLLNSQNQYFNANVSLVSARGVAVFADYQLL
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCEEECCEEEEEECCEEEEEHHHHH
ATMGQMLNYLKTGHPPETELVDVHPSGFIGYKLAPIRLAPPSPGPEPLSTVPPVPLFGFF
HHHHHHHHHHHCCCCCCCCEEEECCCCEECEEEEEEEECCCCCCCCCCCCCCCCCHHHEE
FNGPPKLPTVINFDDRWASHEVAESSALFVAAGTYGRSAQAGAK
ECCCCCCCEEECCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLKSAQIAIFATVVGLVSSPAALAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQ
CCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
SQGTLLPQVRLEASAGPEMLKQYVSPAPLNNDVYLRGRQAGVVVRQLLFDGFASINEVWR
HCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
QAARVDAAAFRVLERTELIGLDAAEAYIDVARYTRLVGLAEQNLKVHLELRKNVLARFEG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCC
GRAGEGDTQQAEERVAAAQAVAAEFHLSLETARAKFRKVVGLEPYNLRFPGRLADLPKNK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
AASLDIAYKFNPTLRAAGADVVAAKRGFDATTGAFLPTLSLEGRASRGKESILYNNQYDQ
CCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCHHH
VSGKLVASWDIFNGGQSSWKREEAAQRMIEEQQRQARLQRDALESIDKAWAARTITNDRV
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AALVRDVEAARRTFIAYNKEYELGQRTLIDLLNSQNQYFNANVSLVSARGVAVFADYQLL
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCEEECCEEEEEECCEEEEEHHHHH
ATMGQMLNYLKTGHPPETELVDVHPSGFIGYKLAPIRLAPPSPGPEPLSTVPPVPLFGFF
HHHHHHHHHHHCCCCCCCCEEEECCCCEECEEEEEEEECCCCCCCCCCCCCCCCCHHHEE
FNGPPKLPTVINFDDRWASHEVAESSALFVAAGTYGRSAQAGAK
ECCCCCCCEEECCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]