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The map label for this gene is 86749336

Identifier: 86749336

GI number: 86749336

Start: 2529144

End: 2529851

Strand: Direct

Name: 86749336

Synonym: RPB_2216

Alternate gene names: NA

Gene position: 2529144-2529851 (Clockwise)

Preceding gene: 86749335

Following gene: 86749337

Centisome position: 47.44

GC content: 68.08

Gene sequence:

>708_bases
ATGTGGGACAGTCCAAACCGTGCCGCGCCGCCGTCCAGTGCGGCCCCCGATTGGCGCGCGACTGCGACCGGGCTCGAACT
GCGCTGGTTCGCTGTCGCCGCAGTGGCCGTGCCGCTGCTTCTCGCCGCGGGCGTGTATTGGTTGCACCGGCTGCCGCCTG
GTCCCAATCTTCGCGGCGACGAAAATCTCATCGAGGTCCGGTTGATAGGTCCGCAAAACGCCGGACCTTTGAACCAGGAA
CGACCCCAAGCCGCGCCGGCAGAACGGGCCCAGGCAGAGTCCCCGGCGGACTCGCCAGCGCGACCGCTGCCCGAAGTCGC
ATCGATCCCGGATCCAGCGCCCGCCGAGCAGGTCGACCCGGCGCAAGCCCCGCGGACCCGGGCGACCGCACCCCCGGTCT
CGCGCATCGCCCGTGAACAGAAGGCCGCCACGTTTCAGCGGACGCTGCTGTCGCATATCGCCCGGTTCCGCGAATATCCA
GACGCGGCCAAGCGCAGTCAGACCCAGGGCGTCGTGCGACTGCTGTTCGCAATGCGGCGTGACGGCAGCGTCGGCCGCAT
CACGATCAGGGCCAGCTCCGGGTCCGCGATCCTCGATGGCGCGGCGATGGCGACGCTGCGAAGAGCGCAGCCGCTGCCGA
GAATTCCGGATGACTTGCCGGACAACCTGAATATTCTTGTGCCGGTCGCGTTCGATTTGTCGTACTGA

Upstream 100 bases:

>100_bases
CACCATGACGCTGAGCCGTCAACCGCCGCCGAACGTGCCGCGGCCGATCCGGTTCTTGGTTTCGATCAAAACGCTGTAGT
CACGAAGGTCGACGATCGCC

Downstream 100 bases:

>100_bases
ATCGTGCAAGGCTCTACAAACAACCGTCACGAGGTTGTCACTGACCGCCGATACCTACCGATGCGGTCATTCATGGCAGT
TTGTAAGCACGTCAGTGCGG

Product: TonB-like protein

Products: NA

Alternate protein names: NB-Like; NB Family C-Terminal Domain Protein; NB Protein Colicin J Receptor; NB-Like Protein; NB Dependent Receptor Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MWDSPNRAAPPSSAAPDWRATATGLELRWFAVAAVAVPLLLAAGVYWLHRLPPGPNLRGDENLIEVRLIGPQNAGPLNQE
RPQAAPAERAQAESPADSPARPLPEVASIPDPAPAEQVDPAQAPRTRATAPPVSRIAREQKAATFQRTLLSHIARFREYP
DAAKRSQTQGVVRLLFAMRRDGSVGRITIRASSGSAILDGAAMATLRRAQPLPRIPDDLPDNLNILVPVAFDLSY

Sequences:

>Translated_235_residues
MWDSPNRAAPPSSAAPDWRATATGLELRWFAVAAVAVPLLLAAGVYWLHRLPPGPNLRGDENLIEVRLIGPQNAGPLNQE
RPQAAPAERAQAESPADSPARPLPEVASIPDPAPAEQVDPAQAPRTRATAPPVSRIAREQKAATFQRTLLSHIARFREYP
DAAKRSQTQGVVRLLFAMRRDGSVGRITIRASSGSAILDGAAMATLRRAQPLPRIPDDLPDNLNILVPVAFDLSY
>Mature_235_residues
MWDSPNRAAPPSSAAPDWRATATGLELRWFAVAAVAVPLLLAAGVYWLHRLPPGPNLRGDENLIEVRLIGPQNAGPLNQE
RPQAAPAERAQAESPADSPARPLPEVASIPDPAPAEQVDPAQAPRTRATAPPVSRIAREQKAATFQRTLLSHIARFREYP
DAAKRSQTQGVVRLLFAMRRDGSVGRITIRASSGSAILDGAAMATLRRAQPLPRIPDDLPDNLNILVPVAFDLSY

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25323; Mature: 25323

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDSPNRAAPPSSAAPDWRATATGLELRWFAVAAVAVPLLLAAGVYWLHRLPPGPNLRGD
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ENLIEVRLIGPQNAGPLNQERPQAAPAERAQAESPADSPARPLPEVASIPDPAPAEQVDP
CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
AQAPRTRATAPPVSRIAREQKAATFQRTLLSHIARFREYPDAAKRSQTQGVVRLLFAMRR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
DGSVGRITIRASSGSAILDGAAMATLRRAQPLPRIPDDLPDNLNILVPVAFDLSY
CCCCEEEEEEECCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MWDSPNRAAPPSSAAPDWRATATGLELRWFAVAAVAVPLLLAAGVYWLHRLPPGPNLRGD
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ENLIEVRLIGPQNAGPLNQERPQAAPAERAQAESPADSPARPLPEVASIPDPAPAEQVDP
CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
AQAPRTRATAPPVSRIAREQKAATFQRTLLSHIARFREYPDAAKRSQTQGVVRLLFAMRR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
DGSVGRITIRASSGSAILDGAAMATLRRAQPLPRIPDDLPDNLNILVPVAFDLSY
CCCCEEEEEEECCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA