| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749110
Identifier: 86749110
GI number: 86749110
Start: 2256746
End: 2257129
Strand: Direct
Name: 86749110
Synonym: RPB_1987
Alternate gene names: NA
Gene position: 2256746-2257129 (Clockwise)
Preceding gene: 86749109
Following gene: 86749111
Centisome position: 42.33
GC content: 66.15
Gene sequence:
>384_bases ATGATGCGCCTCATTCATGTCGTGGTGATCGGAATGCTGGTGTTCGCCGCGGCCTATGTCTACCGGATCAAGATGGAGTC GACCGCGCGCACCGAGAAGGTGCTGCAGCTCCACGCCGAAGTGCGCAAGGAGCGCGAGGCGATCGCGCAGCTCCGTGCCG AATGGGCCAAGCTCGACGCGCCCGGCCGGCTGCAGGGCATCGCCGAGCGGCACCTCAAACTGAAGCCGATCACGGCGCGC CAGTTCGACCAGTTGAAGAACCTGCCGGCGCGGCCGCCGAGCATCGTCAACCCGAACGATCCCGACCCGATCGCCTCGAT GATCGAGAAGATCGATCCCGACATCGTCACCGGCGCGCTGCCGGCCAGGGAGGCCGCGCAATGA
Upstream 100 bases:
>100_bases GCGGCGAACGCACTGCGGCGCCGGCGCACCGGCCCGACGATCTGCCGGGATGGCCGACGCTCGCCGGTGTGATGAAGGCG GGCGTGACGAGGGCCGGCCG
Downstream 100 bases:
>100_bases CCGAACCGTCGGTGCCGCTCGTCGGCCATCACGTCAATTGGCGCCAGCGGCTGGTGCGCAGCCTGATCTACGGCCGCGAC GTCGATCGCGACGCCAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MMRLIHVVVIGMLVFAAAYVYRIKMESTARTEKVLQLHAEVRKEREAIAQLRAEWAKLDAPGRLQGIAERHLKLKPITAR QFDQLKNLPARPPSIVNPNDPDPIASMIEKIDPDIVTGALPAREAAQ
Sequences:
>Translated_127_residues MMRLIHVVVIGMLVFAAAYVYRIKMESTARTEKVLQLHAEVRKEREAIAQLRAEWAKLDAPGRLQGIAERHLKLKPITAR QFDQLKNLPARPPSIVNPNDPDPIASMIEKIDPDIVTGALPAREAAQ >Mature_127_residues MMRLIHVVVIGMLVFAAAYVYRIKMESTARTEKVLQLHAEVRKEREAIAQLRAEWAKLDAPGRLQGIAERHLKLKPITAR QFDQLKNLPARPPSIVNPNDPDPIASMIEKIDPDIVTGALPAREAAQ
Specific function: Unknown
COG id: COG5462
COG function: function code S; Predicted secreted (periplasmic) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14239; Mature: 14239
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLIHVVVIGMLVFAAAYVYRIKMESTARTEKVLQLHAEVRKEREAIAQLRAEWAKLDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGRLQGIAERHLKLKPITARQFDQLKNLPARPPSIVNPNDPDPIASMIEKIDPDIVTGAL CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHCCC PAREAAQ CCCCCCC >Mature Secondary Structure MMRLIHVVVIGMLVFAAAYVYRIKMESTARTEKVLQLHAEVRKEREAIAQLRAEWAKLDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGRLQGIAERHLKLKPITARQFDQLKNLPARPPSIVNPNDPDPIASMIEKIDPDIVTGAL CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHCCC PAREAAQ CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA