| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is penA [H]
Identifier: 86749111
GI number: 86749111
Start: 2257126
End: 2258880
Strand: Direct
Name: penA [H]
Synonym: RPB_1988
Alternate gene names: 86749111
Gene position: 2257126-2258880 (Clockwise)
Preceding gene: 86749110
Following gene: 86749112
Centisome position: 42.33
GC content: 65.98
Gene sequence:
>1755_bases ATGACCGAACCGTCGGTGCCGCTCGTCGGCCATCACGTCAATTGGCGCCAGCGGCTGGTGCGCAGCCTGATCTACGGCCG CGACGTCGATCGCGACGCCAAGGCGCGCGCCCGCGTCGGTCTGGCGATGCTGGCCTTCGCCGCGGTCTATGGCGTGATCG CGTTCAAGCTGACCTTCATCGCGGTGGTCGGCGACAGCCACGGCACGCGGCGCACCGCGTCGCAGGACGCGATCGCCACC GCGCGGCCCGACATCGTCGACCGCAACGGCACCATCCTGGCCACCGACGTCAAATCGCCGTCGCTGTTCGGCGAGCCGCG CCGCATCATCGATCAGGATGAAGCGGTCGAATTGCTCACCGCGACGCTGCCGGACCTCGAGACCCCGGAGGTCCGCGAGC GGCTGGCCTCGAAGAAGGGCTTCGTCTGGCTGAAGCGAGAGATCACGCCGCGGCAGCAGGCCGACATCAAGAAGCTCGGT ATTCCCGGCATCGGCTTCCTGCGCGAGAACAGGCGCATCTACCCCACCGGCACCGAGGTCTCGCACCTCATCGGCCTCGT CAATATCGACAACCAGGGCATCGCCGGCATCGAGAAGTGGCTCGACCACAACGGACTCGCCGATCTGCATCGCGCCGGCT TCGCCTCCGACCGGCTGCAGAAGCCGGTGGAGCTCGCGGTCGACATCCGCGTCCAGCACGCGCTGCGCGATGAATTGCTG AAGGCGAAGGACAAGTACAAGGCCAAGGCGGCGTCCGGTCTCGTCTCCAACGTCAACACCGGCGAGATCGTCGCGATGGT GTCGCTGCCGGATTTCGATCCGAACAATCCGCGCGAGGCCAACGACCCGGACCGCATCAACCGGCTCACCACCGGCGTCT ACGAGATGGGCTCGACCTTCAAGACGCTGACGCTGGCGATGGCGCTCGACTCGGGCAAGGCGACGCTGAATTCGATGTAC GACGCCCGCGGCGCGTTGCGCTACGGCAAGTTCGCGATCCACGACACCCATCCGCTCGGCCGCGCGATCTCGCTGTCGGA AGTGTTCACCTTCTCGTCCAACGTCGGCGCTGCACGGATCGCGCTGTCGATGGGCGTCGACGCGCACAAGGCGTTCCTCA AGAAGGTCGGCCAGCTCGACCGGCTGCGCACCGAACTGCCCGAGAGTGCCTCGCCGATCGTGCCGAAGCGCTGGGGCGAA CTCAACACCATCACCATCTCGTTCGGCCACGGCGTCGCGGTGGCGCCGCTGCAGGCGGTGATGGGCATCAACGCGATGGT CAATGGCGGCTATCTGATCCCACCGACCTTCCACCGGCGCAGCGAAGACGAAGCGCAGAAGATGGCCAAGCGCGTGGTCA AGAAGGAGACCAGCGACAAGATCCGCTATCTGATGCGCCTGAACGCCGAAATCGGCACCGCCAGGACGGCGGATCAGATC GCCAAGGGCTACTACATCGGTGGCAAGACCGGAACCTCGGAAAAGGTGATCAACGGCCGCTACGCCAAGAAGCAGGTGTT GAACTCGTTCACCGCCGTGCTGCCGGCCGACCATCCGCAATTCCAGGTGCTGATCATGCTCGACGAGCCCAAGCCGCTGC CGGAAACCCACGGCTTCATCACCTCGGGCTGGAACGCGGTGCCCACCGGTGGCAAGGTGATCGAGCGAATCGCGCCGCTG CTGGGGATCGAGCCGCGGTTCGATCTGCCGCCGCCCGACCGCCTCATTCTTGCGTCATCGAGGGCGGCCCAGTAG
Upstream 100 bases:
>100_bases GCATCGTCAACCCGAACGATCCCGACCCGATCGCCTCGATGATCGAGAAGATCGATCCCGACATCGTCACCGGCGCGCTG CCGGCCAGGGAGGCCGCGCA
Downstream 100 bases:
>100_bases GTCGCGGGCCACGCGGGGCGGCAATGCGTCAGTCGTGTTGCACCGGGGCGCGCTTGCGCTAAAAGCCCGGTCTGCGTGCG AACTCCCTTCGGACCGACCG
Product: peptidoglycan glycosyltransferase
Products: NA
Alternate protein names: PBP-2 [H]
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MTEPSVPLVGHHVNWRQRLVRSLIYGRDVDRDAKARARVGLAMLAFAAVYGVIAFKLTFIAVVGDSHGTRRTASQDAIAT ARPDIVDRNGTILATDVKSPSLFGEPRRIIDQDEAVELLTATLPDLETPEVRERLASKKGFVWLKREITPRQQADIKKLG IPGIGFLRENRRIYPTGTEVSHLIGLVNIDNQGIAGIEKWLDHNGLADLHRAGFASDRLQKPVELAVDIRVQHALRDELL KAKDKYKAKAASGLVSNVNTGEIVAMVSLPDFDPNNPREANDPDRINRLTTGVYEMGSTFKTLTLAMALDSGKATLNSMY DARGALRYGKFAIHDTHPLGRAISLSEVFTFSSNVGAARIALSMGVDAHKAFLKKVGQLDRLRTELPESASPIVPKRWGE LNTITISFGHGVAVAPLQAVMGINAMVNGGYLIPPTFHRRSEDEAQKMAKRVVKKETSDKIRYLMRLNAEIGTARTADQI AKGYYIGGKTGTSEKVINGRYAKKQVLNSFTAVLPADHPQFQVLIMLDEPKPLPETHGFITSGWNAVPTGGKVIERIAPL LGIEPRFDLPPPDRLILASSRAAQ
Sequences:
>Translated_584_residues MTEPSVPLVGHHVNWRQRLVRSLIYGRDVDRDAKARARVGLAMLAFAAVYGVIAFKLTFIAVVGDSHGTRRTASQDAIAT ARPDIVDRNGTILATDVKSPSLFGEPRRIIDQDEAVELLTATLPDLETPEVRERLASKKGFVWLKREITPRQQADIKKLG IPGIGFLRENRRIYPTGTEVSHLIGLVNIDNQGIAGIEKWLDHNGLADLHRAGFASDRLQKPVELAVDIRVQHALRDELL KAKDKYKAKAASGLVSNVNTGEIVAMVSLPDFDPNNPREANDPDRINRLTTGVYEMGSTFKTLTLAMALDSGKATLNSMY DARGALRYGKFAIHDTHPLGRAISLSEVFTFSSNVGAARIALSMGVDAHKAFLKKVGQLDRLRTELPESASPIVPKRWGE LNTITISFGHGVAVAPLQAVMGINAMVNGGYLIPPTFHRRSEDEAQKMAKRVVKKETSDKIRYLMRLNAEIGTARTADQI AKGYYIGGKTGTSEKVINGRYAKKQVLNSFTAVLPADHPQFQVLIMLDEPKPLPETHGFITSGWNAVPTGGKVIERIAPL LGIEPRFDLPPPDRLILASSRAAQ >Mature_583_residues TEPSVPLVGHHVNWRQRLVRSLIYGRDVDRDAKARARVGLAMLAFAAVYGVIAFKLTFIAVVGDSHGTRRTASQDAIATA RPDIVDRNGTILATDVKSPSLFGEPRRIIDQDEAVELLTATLPDLETPEVRERLASKKGFVWLKREITPRQQADIKKLGI PGIGFLRENRRIYPTGTEVSHLIGLVNIDNQGIAGIEKWLDHNGLADLHRAGFASDRLQKPVELAVDIRVQHALRDELLK AKDKYKAKAASGLVSNVNTGEIVAMVSLPDFDPNNPREANDPDRINRLTTGVYEMGSTFKTLTLAMALDSGKATLNSMYD ARGALRYGKFAIHDTHPLGRAISLSEVFTFSSNVGAARIALSMGVDAHKAFLKKVGQLDRLRTELPESASPIVPKRWGEL NTITISFGHGVAVAPLQAVMGINAMVNGGYLIPPTFHRRSEDEAQKMAKRVVKKETSDKIRYLMRLNAEIGTARTADQIA KGYYIGGKTGTSEKVINGRYAKKQVLNSFTAVLPADHPQFQVLIMLDEPKPLPETHGFITSGWNAVPTGGKVIERIAPLL GIEPRFDLPPPDRLILASSRAAQ
Specific function: Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=557, Percent_Identity=29.0843806104129, Blast_Score=185, Evalue=8e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 64034; Mature: 63902
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPSVPLVGHHVNWRQRLVRSLIYGRDVDRDAKARARVGLAMLAFAAVYGVIAFKLTFI CCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE AVVGDSHGTRRTASQDAIATARPDIVDRNGTILATDVKSPSLFGEPRRIIDQDEAVELLT EEECCCCCCCCCCCCCCHHHCCCCEECCCCCEEEECCCCCCCCCCCHHHCCHHHHHHHHH ATLPDLETPEVRERLASKKGFVWLKREITPRQQADIKKLGIPGIGFLRENRRIYPTGTEV HHCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEECCCEEECCCCCH SHLIGLVNIDNQGIAGIEKWLDHNGLADLHRAGFASDRLQKPVELAVDIRVQHALRDELL HHHEEEEEECCCCHHHHHHHHCCCCHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHH KAKDKYKAKAASGLVSNVNTGEIVAMVSLPDFDPNNPREANDPDRINRLTTGVYEMGSTF HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH KTLTLAMALDSGKATLNSMYDARGALRYGKFAIHDTHPLGRAISLSEVFTFSSNVGAARI HHEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEHHHHHEECCCCCCEEE ALSMGVDAHKAFLKKVGQLDRLRTELPESASPIVPKRWGELNTITISFGHGVAVAPLQAV EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH MGINAMVNGGYLIPPTFHRRSEDEAQKMAKRVVKKETSDKIRYLMRLNAEIGTARTADQI HCCHHEECCCEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHH AKGYYIGGKTGTSEKVINGRYAKKQVLNSFTAVLPADHPQFQVLIMLDEPKPLPETHGFI HCCEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCE TSGWNAVPTGGKVIERIAPLLGIEPRFDLPPPDRLILASSRAAQ ECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure TEPSVPLVGHHVNWRQRLVRSLIYGRDVDRDAKARARVGLAMLAFAAVYGVIAFKLTFI CCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE AVVGDSHGTRRTASQDAIATARPDIVDRNGTILATDVKSPSLFGEPRRIIDQDEAVELLT EEECCCCCCCCCCCCCCHHHCCCCEECCCCCEEEECCCCCCCCCCCHHHCCHHHHHHHHH ATLPDLETPEVRERLASKKGFVWLKREITPRQQADIKKLGIPGIGFLRENRRIYPTGTEV HHCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEECCCEEECCCCCH SHLIGLVNIDNQGIAGIEKWLDHNGLADLHRAGFASDRLQKPVELAVDIRVQHALRDELL HHHEEEEEECCCCHHHHHHHHCCCCHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHH KAKDKYKAKAASGLVSNVNTGEIVAMVSLPDFDPNNPREANDPDRINRLTTGVYEMGSTF HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH KTLTLAMALDSGKATLNSMYDARGALRYGKFAIHDTHPLGRAISLSEVFTFSSNVGAARI HHEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEHHHHHEECCCCCCEEE ALSMGVDAHKAFLKKVGQLDRLRTELPESASPIVPKRWGELNTITISFGHGVAVAPLQAV EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH MGINAMVNGGYLIPPTFHRRSEDEAQKMAKRVVKKETSDKIRYLMRLNAEIGTARTADQI HCCHHEECCCEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHH AKGYYIGGKTGTSEKVINGRYAKKQVLNSFTAVLPADHPQFQVLIMLDEPKPLPETHGFI HCCEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCE TSGWNAVPTGGKVIERIAPLLGIEPRFDLPPPDRLILASSRAAQ ECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3126399 [H]