| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yejA [C]
Identifier: 86748893
GI number: 86748893
Start: 2028551
End: 2030458
Strand: Direct
Name: yejA [C]
Synonym: RPB_1770
Alternate gene names: 86748893
Gene position: 2028551-2030458 (Clockwise)
Preceding gene: 86748892
Following gene: 86748894
Centisome position: 38.05
GC content: 65.25
Gene sequence:
>1908_bases GTGAAGCTGACCCGACGACACCTTCTGCAAGCCGGCGTAGCGGCCGCGGCCACCCCGGCTTTCGGTTTAGGCTCCGGCCT CCTGACCGGCGCGCCGGCGTTGGCCGAGGGCGCGGTCGACAAGCCGACATCCGGACTGACTTGGCGGCACGGCCTGTCGC TGTTCGGCGAGGTCAAATACCCGGCCGGCTTCAAGCGGTTCGACTACGTCAACCCGGATGCGCCGAAGGGCGGCGCGGCG CGGCAGATCTCGCTCGGCACCTTCGACAGTTTCAATCTCGCGGTCGCCGGCGTGAAGGGCAACATCGCTCCGGCGGTGGG CTATCTGTACGAGACGCTGATGACCCAGTCGCAGGACGAGGTCGGCACCTCCTACGGCCTGCTCGCCGAGAGCGCGGCGC ATCCCGAGGACTATTCCTGGGTGGTGTATCGGCTGCGCGCCGATTCGCGCTGGCACGACGGCAGACCGGTGACCGCCGAC GACGTGGTGTTCTCGTTCGACTCCCTGAAGAAGTTCAGCCCGCGCTACGCCTCGTATTACAGCCACGTCACCAAGGCCGA GAAGGCCGGCGAGCGCGAGATCCGCTTCACGTTCGATGGGCCCGGCAACCGCGAATTGCCGACCATCGTCGGCGAACTGA TGATCCTGCCGAAACACTGGTGGGAAGGCACCGACGAGCAGGGCCGCAAGCGCGACATCTCCGCCACCACGCTGGAGAAG CCGCTCGGCTCCGGCCCCTACCGGATCAAGGACTTCGTCGCCGGCCGCTCGATCGTGCTGGAGCGCGTCAAGGATTACTG GGGCGCGAAGCTGCCGGTGCGCGTCGGCCAGTACAATTTCGACGAACTGCGTTTCGAATTCTTCCGCGACAACACCGTGG CCCTCGAAGCGTTCAAGGCCGATCAGGCCGACTGGATCGCCGAGAACTCCGCCAAGCAATGGGCGACGGCCTACGATTTC CCCGCGGTCACCGACAAGCGGGTGGTCCGGGAGGAGTTTCCGATCAACGATTCCGGCCGGATGCAGGCCTTCGTGCTCAA TCTGCGCCGCGACATGTTCAAGGACGCCCGGATCCGGCGCGCCTTCAACTACGCGTTCGACTTCGAGGAAATGAACAAGC AGCTGTTCTACGGTCAGTACAAGCGGATCAACAGCTACTTCGAAGGCACCGAGCTCGCCTCCAGCGGGCTGCCGCAGGGC GACGAACTCGCGATCCTCGACACCGTGCGCGACAAGGTGCCTGCCGAATTGTTCACGAAGGCCTACACCAATCCGGTCGG CGGCAATCCGGAAGCGGTTCGCGCCAATCTGCGCGAGGCGATGAAGCTGGTGAAGGAAGCCGGCTTCGACTTCAAGGACC GCAAGCTGGTCGATCCCTCCGGCAAGCCGGTGACGGTCGAGATATTGGTGCAGGACCCCTCGTCGGAGCGGATCTCGCTG TTCTACAGGCCGTCGCTGGAGCGGCTCGGCGTCACCGTGTCGATCCGCGTCGTCGACGATGCGCAGTATCAGAACCGCAT CCGCGCCTTCGACTTCGACGTCATCACCGATCTGTGGGGCCAGTCGCTGTCGCCCGGCAACGAGCAGCGCGATTATTGGG GCTCGGCGGCGGCCGATCAGCAAGGCTCGCGCAACACCATCGGCATCAAGAATCCCGCGGTCGACGCGCTGATCGACAAG GTGATCTTCGCCAAGGACCGCGCCACGCTGGTGGCGGCGACACGCGCGCTCGACCGCGTGCTGCTGTGGAATTTCTACGT CGTGCCGCAATTCACCTACGGCTTCTCGCGCTACGCGCGCTGGGACCGTTTCAGCCGCGCCGAGTTGCCGAAATACGCCC GCTCCGGCCTGCCGGCGCTGTGGTGGTACGACGAAGCCAAGGCCGCCAAGATCGGCCGACGCTCTTGA
Upstream 100 bases:
>100_bases TGTCCAAATCTTAAGAACCAAGTCCTGAAAACATGTGCTGAAATCAGGCCCTGAGACCAGCACCATCGTCCCAGTCCGAC GCCAACAGGAATTCCAGACC
Downstream 100 bases:
>100_bases GGACAGGCTCGCGTATGGCGCAGCTCAACCGCCGCGAAGTTCTCGTCCTCGGCGTCGGCGCCCTGGCGGCGGCCCGGATC AGCCCCGCATCCGCGGCCGA
Product: extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MKLTRRHLLQAGVAAAATPAFGLGSGLLTGAPALAEGAVDKPTSGLTWRHGLSLFGEVKYPAGFKRFDYVNPDAPKGGAA RQISLGTFDSFNLAVAGVKGNIAPAVGYLYETLMTQSQDEVGTSYGLLAESAAHPEDYSWVVYRLRADSRWHDGRPVTAD DVVFSFDSLKKFSPRYASYYSHVTKAEKAGEREIRFTFDGPGNRELPTIVGELMILPKHWWEGTDEQGRKRDISATTLEK PLGSGPYRIKDFVAGRSIVLERVKDYWGAKLPVRVGQYNFDELRFEFFRDNTVALEAFKADQADWIAENSAKQWATAYDF PAVTDKRVVREEFPINDSGRMQAFVLNLRRDMFKDARIRRAFNYAFDFEEMNKQLFYGQYKRINSYFEGTELASSGLPQG DELAILDTVRDKVPAELFTKAYTNPVGGNPEAVRANLREAMKLVKEAGFDFKDRKLVDPSGKPVTVEILVQDPSSERISL FYRPSLERLGVTVSIRVVDDAQYQNRIRAFDFDVITDLWGQSLSPGNEQRDYWGSAAADQQGSRNTIGIKNPAVDALIDK VIFAKDRATLVAATRALDRVLLWNFYVVPQFTYGFSRYARWDRFSRAELPKYARSGLPALWWYDEAKAAKIGRRS
Sequences:
>Translated_635_residues MKLTRRHLLQAGVAAAATPAFGLGSGLLTGAPALAEGAVDKPTSGLTWRHGLSLFGEVKYPAGFKRFDYVNPDAPKGGAA RQISLGTFDSFNLAVAGVKGNIAPAVGYLYETLMTQSQDEVGTSYGLLAESAAHPEDYSWVVYRLRADSRWHDGRPVTAD DVVFSFDSLKKFSPRYASYYSHVTKAEKAGEREIRFTFDGPGNRELPTIVGELMILPKHWWEGTDEQGRKRDISATTLEK PLGSGPYRIKDFVAGRSIVLERVKDYWGAKLPVRVGQYNFDELRFEFFRDNTVALEAFKADQADWIAENSAKQWATAYDF PAVTDKRVVREEFPINDSGRMQAFVLNLRRDMFKDARIRRAFNYAFDFEEMNKQLFYGQYKRINSYFEGTELASSGLPQG DELAILDTVRDKVPAELFTKAYTNPVGGNPEAVRANLREAMKLVKEAGFDFKDRKLVDPSGKPVTVEILVQDPSSERISL FYRPSLERLGVTVSIRVVDDAQYQNRIRAFDFDVITDLWGQSLSPGNEQRDYWGSAAADQQGSRNTIGIKNPAVDALIDK VIFAKDRATLVAATRALDRVLLWNFYVVPQFTYGFSRYARWDRFSRAELPKYARSGLPALWWYDEAKAAKIGRRS >Mature_635_residues MKLTRRHLLQAGVAAAATPAFGLGSGLLTGAPALAEGAVDKPTSGLTWRHGLSLFGEVKYPAGFKRFDYVNPDAPKGGAA RQISLGTFDSFNLAVAGVKGNIAPAVGYLYETLMTQSQDEVGTSYGLLAESAAHPEDYSWVVYRLRADSRWHDGRPVTAD DVVFSFDSLKKFSPRYASYYSHVTKAEKAGEREIRFTFDGPGNRELPTIVGELMILPKHWWEGTDEQGRKRDISATTLEK PLGSGPYRIKDFVAGRSIVLERVKDYWGAKLPVRVGQYNFDELRFEFFRDNTVALEAFKADQADWIAENSAKQWATAYDF PAVTDKRVVREEFPINDSGRMQAFVLNLRRDMFKDARIRRAFNYAFDFEEMNKQLFYGQYKRINSYFEGTELASSGLPQG DELAILDTVRDKVPAELFTKAYTNPVGGNPEAVRANLREAMKLVKEAGFDFKDRKLVDPSGKPVTVEILVQDPSSERISL FYRPSLERLGVTVSIRVVDDAQYQNRIRAFDFDVITDLWGQSLSPGNEQRDYWGSAAADQQGSRNTIGIKNPAVDALIDK VIFAKDRATLVAATRALDRVLLWNFYVVPQFTYGFSRYARWDRFSRAELPKYARSGLPALWWYDEAKAAKIGRRS
Specific function: Possible binding-protein with either a transport or enzymatic activity [H]
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=585, Percent_Identity=37.0940170940171, Blast_Score=387, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 71469; Mature: 71469
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTRRHLLQAGVAAAATPAFGLGSGLLTGAPALAEGAVDKPTSGLTWRHGLSLFGEVKY CCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCHHHCCCHHEEECC PAGFKRFDYVNPDAPKGGAARQISLGTFDSFNLAVAGVKGNIAPAVGYLYETLMTQSQDE CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHH VGTSYGLLAESAAHPEDYSWVVYRLRADSRWHDGRPVTADDVVFSFDSLKKFSPRYASYY HCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHCCCHHHHHH SHVTKAEKAGEREIRFTFDGPGNRELPTIVGELMILPKHWWEGTDEQGRKRDISATTLEK HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHEECHHHCCCCCCCCCCCCCCHHHHHC PLGSGPYRIKDFVAGRSIVLERVKDYWGAKLPVRVGQYNFDELRFEFFRDNTVALEAFKA CCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCEEEEEEECC DQADWIAENSAKQWATAYDFPAVTDKRVVREEFPINDSGRMQAFVLNLRRDMFKDARIRR CCCHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH AFNYAFDFEEMNKQLFYGQYKRINSYFEGTELASSGLPQGDELAILDTVRDKVPAELFTK HHHHEECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEHHHHHHCCHHHHHH AYTNPVGGNPEAVRANLREAMKLVKEAGFDFKDRKLVDPSGKPVTVEILVQDPSSERISL HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEEEECCCCCEEEE FYRPSLERLGVTVSIRVVDDAQYQNRIRAFDFDVITDLWGQSLSPGNEQRDYWGSAAADQ EECCCHHHCCEEEEEEEECCCHHHCHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCC QGSRNTIGIKNPAVDALIDKVIFAKDRATLVAATRALDRVLLWNFYVVPQFTYGFSRYAR CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHH WDRFSRAELPKYARSGLPALWWYDEAKAAKIGRRS HHCCCHHHCCHHHHCCCCEEEEECCHHHHHCCCCC >Mature Secondary Structure MKLTRRHLLQAGVAAAATPAFGLGSGLLTGAPALAEGAVDKPTSGLTWRHGLSLFGEVKY CCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCHHHCCCHHEEECC PAGFKRFDYVNPDAPKGGAARQISLGTFDSFNLAVAGVKGNIAPAVGYLYETLMTQSQDE CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHH VGTSYGLLAESAAHPEDYSWVVYRLRADSRWHDGRPVTADDVVFSFDSLKKFSPRYASYY HCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHCCCHHHHHH SHVTKAEKAGEREIRFTFDGPGNRELPTIVGELMILPKHWWEGTDEQGRKRDISATTLEK HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHEECHHHCCCCCCCCCCCCCCHHHHHC PLGSGPYRIKDFVAGRSIVLERVKDYWGAKLPVRVGQYNFDELRFEFFRDNTVALEAFKA CCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCEEEEEEECC DQADWIAENSAKQWATAYDFPAVTDKRVVREEFPINDSGRMQAFVLNLRRDMFKDARIRR CCCHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH AFNYAFDFEEMNKQLFYGQYKRINSYFEGTELASSGLPQGDELAILDTVRDKVPAELFTK HHHHEECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEHHHHHHCCHHHHHH AYTNPVGGNPEAVRANLREAMKLVKEAGFDFKDRKLVDPSGKPVTVEILVQDPSSERISL HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEEEECCCCCEEEE FYRPSLERLGVTVSIRVVDDAQYQNRIRAFDFDVITDLWGQSLSPGNEQRDYWGSAAADQ EECCCHHHCCEEEEEEEECCCHHHCHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCC QGSRNTIGIKNPAVDALIDKVIFAKDRATLVAATRALDRVLLWNFYVVPQFTYGFSRYAR CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHH WDRFSRAELPKYARSGLPALWWYDEAKAAKIGRRS HHCCCHHHCCHHHHCCCCEEEEECCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]