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The map label for this gene is yciF [H]

Identifier: 86748860

GI number: 86748860

Start: 1984047

End: 1984547

Strand: Direct

Name: yciF [H]

Synonym: RPB_1737

Alternate gene names: 86748860

Gene position: 1984047-1984547 (Clockwise)

Preceding gene: 86748857

Following gene: 86748869

Centisome position: 37.21

GC content: 63.47

Gene sequence:

>501_bases
ATGGCTGTTGCCAAAGACAAGAATCTCAACGATCTCTTCCTCGACACCCTCAAGGACATCTACTACGCCGAAAAGCAGAT
CCTGAAGGCGCTGCCGAAGATGGCGAAGGCCGCCACCTCGGACAAGCTGCGCGCCGCGTTCGAGAAGCATCAGGGCGAAA
CCGAAGGCCAGATCGAACGGCTGGAGCAGATCTTCGAACTGCTGGACAAGCCCGCGCGCGGCAAGACCTGCGACGCGATC
ATGGGCATCCTCGACGAGGGCAAGGAGATCATGGACGACTACAAGGGCACCGAGGCGCTCGACGCCGGGCTGCTTGCCGC
GGCGCAGGCCGTCGAGCACTACGAGATCTCACGCTACGGCACGCTGAAGCAGTGGGCGACCCAGCTCGGCATGAAGGACG
CCGCCAAGCTGCTCGACCAGACGCTGCAGCAGGAAAAGACCACCGACGTGACCCTGACCAAGCTCGCCGAGAGCGCCGTC
AACCTCGCCGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
GATTTGAAAACTGGATGACACCAGGCGATCGTCAGGAACAATCGTTCGAAGGCCGCGTTGGGCGCAGGTCCGAGACCACG
CACACCAACCGGAGACCGCC

Downstream 100 bases:

>100_bases
TCGTCGCGGCTCCCCACATTCTCCGTCGTGGCCGGGCTTGCCCCGTCCATCGACGGACGAAGAGACGGACGAACAAAAGC
CCCGGGCGCGGCGCGTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAVAKDKNLNDLFLDTLKDIYYAEKQILKALPKMAKAATSDKLRAAFEKHQGETEGQIERLEQIFELLDKPARGKTCDAI
MGILDEGKEIMDDYKGTEALDAGLLAAAQAVEHYEISRYGTLKQWATQLGMKDAAKLLDQTLQQEKTTDVTLTKLAESAV
NLAAAA

Sequences:

>Translated_166_residues
MAVAKDKNLNDLFLDTLKDIYYAEKQILKALPKMAKAATSDKLRAAFEKHQGETEGQIERLEQIFELLDKPARGKTCDAI
MGILDEGKEIMDDYKGTEALDAGLLAAAQAVEHYEISRYGTLKQWATQLGMKDAAKLLDQTLQQEKTTDVTLTKLAESAV
NLAAAA
>Mature_165_residues
AVAKDKNLNDLFLDTLKDIYYAEKQILKALPKMAKAATSDKLRAAFEKHQGETEGQIERLEQIFELLDKPARGKTCDAIM
GILDEGKEIMDDYKGTEALDAGLLAAAQAVEHYEISRYGTLKQWATQLGMKDAAKLLDQTLQQEKTTDVTLTKLAESAVN
LAAAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=157, Percent_Identity=48.4076433121019, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18291; Mature: 18160

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAKDKNLNDLFLDTLKDIYYAEKQILKALPKMAKAATSDKLRAAFEKHQGETEGQIER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEQIFELLDKPARGKTCDAIMGILDEGKEIMDDYKGTEALDAGLLAAAQAVEHYEISRYG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
TLKQWATQLGMKDAAKLLDQTLQQEKTTDVTLTKLAESAVNLAAAA
CHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVAKDKNLNDLFLDTLKDIYYAEKQILKALPKMAKAATSDKLRAAFEKHQGETEGQIER
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEQIFELLDKPARGKTCDAIMGILDEGKEIMDDYKGTEALDAGLLAAAQAVEHYEISRYG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
TLKQWATQLGMKDAAKLLDQTLQQEKTTDVTLTKLAESAVNLAAAA
CHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]