| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is hipO [H]
Identifier: 86748857
GI number: 86748857
Start: 1980211
End: 1981380
Strand: Direct
Name: hipO [H]
Synonym: RPB_1734
Alternate gene names: 86748857
Gene position: 1980211-1981380 (Clockwise)
Preceding gene: 86748855
Following gene: 86748860
Centisome position: 37.14
GC content: 67.69
Gene sequence:
>1170_bases ATGCCCTTGATCAACCGCGTCGCCGACCTGCAACCCGATATCATGGCCTGGCGTCACGACCTCCATCAGCACCCCGAACT GATGTACGACGTCGACCGCACCGCCGATTTCGTCGCCCAGCGCCTGCGCGAATTCGGCTGCGACGAGGTGGTGACGGGAC TCGGCCGCACCGGCGTGGTCGGTGTGATCCGCGGCCGCAAGCCGGCGAGCGGCGACCTCAAGGTGATCGGGCTGCGCGCC GACATGGACGCGCTGCCGATCGAGGAGGCGACCGGTCTACCCTATGCCTCCAAGGTGCCCGGCAAGATGCACGCCTGCGG CCATGACGGCCACACCGCGATGCTGCTCGGCGCCGCGCGCTATCTCGCCGAGACCCGCAATTTCGCAGGCAGTGTAGTGG TGATCTTCCAGCCGGCCGAGGAGGGCGGCGCGGGGGCCGCGGCGATGATCAAGGACGGGCTGATGGACCGCTTCGGCATC GAGCAGGTCTACGGCATGCACAACGGCCCCGGCATCCCGGTCGGCTCCTTCGCCATCAGCCCGGGCGCGATCATGGCCTC GACCGATTCGGTCGACATCCGCATCGAGGGCGTCGGCGGCCACGCCGCGCGGCCGCATATGTGCGTCGACTCGGTGCTGG TGGGCGCCCAGCTCGTCACCGCGCTGCAGTCGATCGTGTCGCGCACGGTCGATCCGCTGGAATCGGCGGTGATCTCGATC TGCGAATTCCACGCCGGCAACGCCCGCAACGTCATCCCGCAGATCGCCGAACTGAAAGGCACGGTCCGCACCCTGAAGGC CGAAGTTCGCGACCTGGTCGAGAAGCGCATCCACGAGGTCGCGGCCGGCGTTGCGCAGTCGACCGGCGCCAGGATCGACA TCGTCTACGAGCGCGGCTACCCGGTGGTGGTCAACCATGCCGAGCAGACCGAGGTGGCGCAGCGGATCGCCCGCGACATC GCCGGCGAGTCCAACGTGACGTCGATGCCGCCGCTGATGGGCGCCGAGGATTTCGCCTATATGCTGGAAGCGCGGCCGGG CGCGTTCATCTTCCTCGGCAATGGCGACAGCGCCGGGCTGCATCACCCGGCCTACAACTTCAACGACGACGCCATCGTCT ACGGCACCTCGTACTGGATCAAACTGGTCGAGAACCAACTCGCGGCGTGA
Upstream 100 bases:
>100_bases TAGCCCCGCGGCGGGGCGGTGTACAGTTGCCGCCGGGCGGCAGGCCGGCTAGCCTGCCCGATCAGAATACGAAACCAACT TCCGGAGCCTCGTCAGCCAC
Downstream 100 bases:
>100_bases CGCCGTCGCCCGGATCGGCTGCGGCCGGTCAGTAGCTCAGCGTGGTGCGGATGCCGAGCACCACCGCGTCCCTGATCCGC CTGGTCCCGGCGGGATCGAA
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MPLINRVADLQPDIMAWRHDLHQHPELMYDVDRTADFVAQRLREFGCDEVVTGLGRTGVVGVIRGRKPASGDLKVIGLRA DMDALPIEEATGLPYASKVPGKMHACGHDGHTAMLLGAARYLAETRNFAGSVVVIFQPAEEGGAGAAAMIKDGLMDRFGI EQVYGMHNGPGIPVGSFAISPGAIMASTDSVDIRIEGVGGHAARPHMCVDSVLVGAQLVTALQSIVSRTVDPLESAVISI CEFHAGNARNVIPQIAELKGTVRTLKAEVRDLVEKRIHEVAAGVAQSTGARIDIVYERGYPVVVNHAEQTEVAQRIARDI AGESNVTSMPPLMGAEDFAYMLEARPGAFIFLGNGDSAGLHHPAYNFNDDAIVYGTSYWIKLVENQLAA
Sequences:
>Translated_389_residues MPLINRVADLQPDIMAWRHDLHQHPELMYDVDRTADFVAQRLREFGCDEVVTGLGRTGVVGVIRGRKPASGDLKVIGLRA DMDALPIEEATGLPYASKVPGKMHACGHDGHTAMLLGAARYLAETRNFAGSVVVIFQPAEEGGAGAAAMIKDGLMDRFGI EQVYGMHNGPGIPVGSFAISPGAIMASTDSVDIRIEGVGGHAARPHMCVDSVLVGAQLVTALQSIVSRTVDPLESAVISI CEFHAGNARNVIPQIAELKGTVRTLKAEVRDLVEKRIHEVAAGVAQSTGARIDIVYERGYPVVVNHAEQTEVAQRIARDI AGESNVTSMPPLMGAEDFAYMLEARPGAFIFLGNGDSAGLHHPAYNFNDDAIVYGTSYWIKLVENQLAA >Mature_388_residues PLINRVADLQPDIMAWRHDLHQHPELMYDVDRTADFVAQRLREFGCDEVVTGLGRTGVVGVIRGRKPASGDLKVIGLRAD MDALPIEEATGLPYASKVPGKMHACGHDGHTAMLLGAARYLAETRNFAGSVVVIFQPAEEGGAGAAAMIKDGLMDRFGIE QVYGMHNGPGIPVGSFAISPGAIMASTDSVDIRIEGVGGHAARPHMCVDSVLVGAQLVTALQSIVSRTVDPLESAVISIC EFHAGNARNVIPQIAELKGTVRTLKAEVRDLVEKRIHEVAAGVAQSTGARIDIVYERGYPVVVNHAEQTEVAQRIARDIA GESNVTSMPPLMGAEDFAYMLEARPGAFIFLGNGDSAGLHHPAYNFNDDAIVYGTSYWIKLVENQLAA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=427, Percent_Identity=28.1030444964871, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41609; Mature: 41478
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLINRVADLQPDIMAWRHDLHQHPELMYDVDRTADFVAQRLREFGCDEVVTGLGRTGVV CCHHHHHHHCCHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCEE GVIRGRKPASGDLKVIGLRADMDALPIEEATGLPYASKVPGKMHACGHDGHTAMLLGAAR EEEECCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH YLAETRNFAGSVVVIFQPAEEGGAGAAAMIKDGLMDRFGIEQVYGMHNGPGIPVGSFAIS HHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEEEC PGAIMASTDSVDIRIEGVGGHAARPHMCVDSVLVGAQLVTALQSIVSRTVDPLESAVISI CCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CEFHAGNARNVIPQIAELKGTVRTLKAEVRDLVEKRIHEVAAGVAQSTGARIDIVYERGY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC PVVVNHAEQTEVAQRIARDIAGESNVTSMPPLMGAEDFAYMLEARPGAFIFLGNGDSAGL CEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCC HHPAYNFNDDAIVYGTSYWIKLVENQLAA CCCCCCCCCCEEEEEHHHHHHHHHHHHCC >Mature Secondary Structure PLINRVADLQPDIMAWRHDLHQHPELMYDVDRTADFVAQRLREFGCDEVVTGLGRTGVV CHHHHHHHCCHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCEE GVIRGRKPASGDLKVIGLRADMDALPIEEATGLPYASKVPGKMHACGHDGHTAMLLGAAR EEEECCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH YLAETRNFAGSVVVIFQPAEEGGAGAAAMIKDGLMDRFGIEQVYGMHNGPGIPVGSFAIS HHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEEEC PGAIMASTDSVDIRIEGVGGHAARPHMCVDSVLVGAQLVTALQSIVSRTVDPLESAVISI CCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CEFHAGNARNVIPQIAELKGTVRTLKAEVRDLVEKRIHEVAAGVAQSTGARIDIVYERGY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC PVVVNHAEQTEVAQRIARDIAGESNVTSMPPLMGAEDFAYMLEARPGAFIFLGNGDSAGL CEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCC HHPAYNFNDDAIVYGTSYWIKLVENQLAA CCCCCCCCCCEEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]