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The map label for this gene is 86748843

Identifier: 86748843

GI number: 86748843

Start: 1960683

End: 1963049

Strand: Direct

Name: 86748843

Synonym: RPB_1720

Alternate gene names: NA

Gene position: 1960683-1963049 (Clockwise)

Preceding gene: 86748842

Following gene: 86748845

Centisome position: 36.77

GC content: 65.23

Gene sequence:

>2367_bases
ATGCTGGATAAGAACGTCAAAGATGCCGAAGTCGACGAACTGAATCGGCGCCGGGTCAGCATCGCCTTCGGGCTGGAGCG
GATGGGGCTGATCGCGATCCGCGCACCGATCCTGTCCTGCATCGTCCTGGCCGTGCTGATCGTGGCGGCGATCTTCGGCA
TCCAGCGCATCAAGATCGACGATTCGCTGAGCCAGCTGTTCCGGTCCGACACCAAGGAATTCCACCAATACGAGCAGGTC
ACCAAGCGCTTTCCCTCGTCCGAATTCGACGTGCTGGTGGTGGTCGAAGGCAAGAACCTGCTCGCGCGCGACAATCTCGA
GAAACTGCGCGATCTGGTCACAGATTTGCAACTCGTCGACGGCACCCGCGGTCTGATCTCGCTGTTTTCGGCGCGGCAGG
CGCCTGAGCCCGGAAAGCTGCCGGCGGCCTTGTTTCCCAACGAACTGCCGGAAGGCGAGGCCTACGACAAGTTCATCGAG
ACTGTGAAGAGCAACGAGATCATCCGCGGCAAGCTGATCTCGGAGGACGGCACGCTGGCGCTGATCGTGCTGTCGCTGGA
GCCGGAGATCGTCGGCAACAACAAGCTGTCGGAGACGATCGCCGAAATCCGCAAGGTGATGGCCGAGGACCTCGAAGGCA
CCGGCCTGTCGCGGCAATTGTCCGGCGTTCCGGTGATGCAGCTCGAGATCCGCAACGCGGTCGAGCGCGACGGCCTGATC
TACAACATCGCCGGCATCCTCGCCGGCTGCATCATCGCGATCCTGTTCTTCCGCAAGATCTCGTTCATGATCGTGGCGGC
GTTTCCGCCGCTGCTGGCGATCCTGCTGTCGCTCGGCGTGCTCGGCTGGACCGGCTTCAGCCTCAACATGTTCCTCAACG
TGATGACGCCGCTGATCATGGTGATCAGCTTCGCCGACTCGATGCAGCTCACTTTTGCGGCGCGCGATCGGTTGATCGCC
GGCGAGGACAAATACACCGCCTTCAGGAACGCCGTGCTGGTGGTCGGCCCGGCCTGCGTGCTGACCCACGCGACCGCCGG
CATTTCCTTCATCGCGCTGCAGTTTTCCGACTCCGACTTGATCCGCGCGTTCGGTGAGGCGGGCCTCGTCGCCACGGTGA
TCGCGCTGATCGCGGTGCTGTCGCTGGTGCCGGTGTTCGGCGTGCTGCTGGTGCGCAACGAGCAGGCGTTCGCCGCCAAG
TTCCAGAGCGCCGATCTCGGGGTCAATGCGCTGCGCCGGTTCTGCGCCTTCATCGCGGTGCGGATGGTCGGCCGCCCCGG
GCTGTTCAGCCTGCTCGCGCTGCTGCTGGTCGGCGGGCTCGGCGTGATCTACGCCAATCTCGAGCCCCGCTACCGACTCG
CCGATCAGGTGCCCGACAAGCAGCAGGCGGTGCAGGCCAGCGATCGGCTCGACGCCAAGCTCACCGGCGCCAATCCGATC
GACGTGCTGGTCGAATTCCCCAAAGGGCAGACGCTGTATTCGCCACAGACGCTGCAGACCATCGCCGATGTCCACGCCAT
GGTCGAGAAGCAGGCCGGCGTCGGCAACGTCTGGTCGCTGGAGACGCTGCGTCGCTGGCTCGCCGAGAAGGCGCATACCG
ACGACGTCGCAACGCTGAAGGAATATGTCGACGTCATCCCCGAGCATCTGGTGCGCCGGTTCATCTCCGCGGACCAGACC
GCGGTGGTGGTGTCCGGCCGCGTGCCGGATCTCGATTCCAGCGAGATTCTGCCGGTGGTGCAGAAGCTCGACCACGCGCT
CGATGCGGTACGCGCGAAGCACCCGGGCTACGAAGTCGCGGTCACCGGCCTGTCGGCGATTGCGGCGCGCAACAGCGCGG
ACATGATCTCGAAACTCAACCACGCCCTGACCATCGAATTCGCCTTGGTGGCGATGTTCATCGGGCTGGCGTTCCGTTCG
GTGGTGGTGATGCTCGCTTGCATCCTGCCGGGAATCTTCCCGGTGGTGCTGTCGGGCACGTTGCTGTGGGGGCTCGGCGA
GGGGCTGCAGTTCGCCAGCGCGGTCGCGCTGATCGTGTCGTTCGGCCTCGGCCTCAGTGCGACGATCCACTTTCTCAACC
GGCTGCGGCTGGAGAGCTCGCCGGGGACCAGCGCCGCGGCCGCGGTCGAGCGCGCCACTGTGCTGGTCGGTCCGGCGCTG
ATTCTCACCACCGTGGTGCTGGCCTGCGGGCTCGGCGTCACGGTGTTCTCCGACCTGCCGTCGCTGCGGCTGTTCGGCTG
GCTCAGCGCGTTCGCGATGGTCGCAGCCTTGATCGCCGACCTGTTCATCCTGCGGCCGACTGCGATGTGGTTGATCAGCA
TGGCCGAGCGGCTGCGCCGCAACCGCAAGCCGGGGCCGGTGGTGTAG

Upstream 100 bases:

>100_bases
CATCACATTTCGGCACGGATGAACCTTTCCCGGGCGCGGCGGTGTCGCAATCGTGCCGGATATCTCGGTTCATCGCGTGA
CCGCCAGAACGGAACAGCGC

Downstream 100 bases:

>100_bases
AGCATTACGGGCGGAGTGGAAGTTGGAAGGGACGCGTCTGCAGATCGTTCGTCGCGACGCGGTTCAAATGAAAAAACCCC
TCGGACCGGCCGGTCCGAGG

Product: RND superfamily transporter

Products: NA

Alternate protein names: Exporter Of RND Superfamily Protein-Like Protein; RND Efflux Transporter; Membrane Transporter; Exporter Of RND Superfamily; Patched Family Protein; Integral Membrane Protein; RND Superfamily Exporter; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Histidine Kinase; Exporter Of RND Superfamily Protein; Sterol-Sensing 5tm Box Domain Protein; MMPL Domain Protein

Number of amino acids: Translated: 788; Mature: 788

Protein sequence:

>788_residues
MLDKNVKDAEVDELNRRRVSIAFGLERMGLIAIRAPILSCIVLAVLIVAAIFGIQRIKIDDSLSQLFRSDTKEFHQYEQV
TKRFPSSEFDVLVVVEGKNLLARDNLEKLRDLVTDLQLVDGTRGLISLFSARQAPEPGKLPAALFPNELPEGEAYDKFIE
TVKSNEIIRGKLISEDGTLALIVLSLEPEIVGNNKLSETIAEIRKVMAEDLEGTGLSRQLSGVPVMQLEIRNAVERDGLI
YNIAGILAGCIIAILFFRKISFMIVAAFPPLLAILLSLGVLGWTGFSLNMFLNVMTPLIMVISFADSMQLTFAARDRLIA
GEDKYTAFRNAVLVVGPACVLTHATAGISFIALQFSDSDLIRAFGEAGLVATVIALIAVLSLVPVFGVLLVRNEQAFAAK
FQSADLGVNALRRFCAFIAVRMVGRPGLFSLLALLLVGGLGVIYANLEPRYRLADQVPDKQQAVQASDRLDAKLTGANPI
DVLVEFPKGQTLYSPQTLQTIADVHAMVEKQAGVGNVWSLETLRRWLAEKAHTDDVATLKEYVDVIPEHLVRRFISADQT
AVVVSGRVPDLDSSEILPVVQKLDHALDAVRAKHPGYEVAVTGLSAIAARNSADMISKLNHALTIEFALVAMFIGLAFRS
VVVMLACILPGIFPVVLSGTLLWGLGEGLQFASAVALIVSFGLGLSATIHFLNRLRLESSPGTSAAAAVERATVLVGPAL
ILTTVVLACGLGVTVFSDLPSLRLFGWLSAFAMVAALIADLFILRPTAMWLISMAERLRRNRKPGPVV

Sequences:

>Translated_788_residues
MLDKNVKDAEVDELNRRRVSIAFGLERMGLIAIRAPILSCIVLAVLIVAAIFGIQRIKIDDSLSQLFRSDTKEFHQYEQV
TKRFPSSEFDVLVVVEGKNLLARDNLEKLRDLVTDLQLVDGTRGLISLFSARQAPEPGKLPAALFPNELPEGEAYDKFIE
TVKSNEIIRGKLISEDGTLALIVLSLEPEIVGNNKLSETIAEIRKVMAEDLEGTGLSRQLSGVPVMQLEIRNAVERDGLI
YNIAGILAGCIIAILFFRKISFMIVAAFPPLLAILLSLGVLGWTGFSLNMFLNVMTPLIMVISFADSMQLTFAARDRLIA
GEDKYTAFRNAVLVVGPACVLTHATAGISFIALQFSDSDLIRAFGEAGLVATVIALIAVLSLVPVFGVLLVRNEQAFAAK
FQSADLGVNALRRFCAFIAVRMVGRPGLFSLLALLLVGGLGVIYANLEPRYRLADQVPDKQQAVQASDRLDAKLTGANPI
DVLVEFPKGQTLYSPQTLQTIADVHAMVEKQAGVGNVWSLETLRRWLAEKAHTDDVATLKEYVDVIPEHLVRRFISADQT
AVVVSGRVPDLDSSEILPVVQKLDHALDAVRAKHPGYEVAVTGLSAIAARNSADMISKLNHALTIEFALVAMFIGLAFRS
VVVMLACILPGIFPVVLSGTLLWGLGEGLQFASAVALIVSFGLGLSATIHFLNRLRLESSPGTSAAAAVERATVLVGPAL
ILTTVVLACGLGVTVFSDLPSLRLFGWLSAFAMVAALIADLFILRPTAMWLISMAERLRRNRKPGPVV
>Mature_788_residues
MLDKNVKDAEVDELNRRRVSIAFGLERMGLIAIRAPILSCIVLAVLIVAAIFGIQRIKIDDSLSQLFRSDTKEFHQYEQV
TKRFPSSEFDVLVVVEGKNLLARDNLEKLRDLVTDLQLVDGTRGLISLFSARQAPEPGKLPAALFPNELPEGEAYDKFIE
TVKSNEIIRGKLISEDGTLALIVLSLEPEIVGNNKLSETIAEIRKVMAEDLEGTGLSRQLSGVPVMQLEIRNAVERDGLI
YNIAGILAGCIIAILFFRKISFMIVAAFPPLLAILLSLGVLGWTGFSLNMFLNVMTPLIMVISFADSMQLTFAARDRLIA
GEDKYTAFRNAVLVVGPACVLTHATAGISFIALQFSDSDLIRAFGEAGLVATVIALIAVLSLVPVFGVLLVRNEQAFAAK
FQSADLGVNALRRFCAFIAVRMVGRPGLFSLLALLLVGGLGVIYANLEPRYRLADQVPDKQQAVQASDRLDAKLTGANPI
DVLVEFPKGQTLYSPQTLQTIADVHAMVEKQAGVGNVWSLETLRRWLAEKAHTDDVATLKEYVDVIPEHLVRRFISADQT
AVVVSGRVPDLDSSEILPVVQKLDHALDAVRAKHPGYEVAVTGLSAIAARNSADMISKLNHALTIEFALVAMFIGLAFRS
VVVMLACILPGIFPVVLSGTLLWGLGEGLQFASAVALIVSFGLGLSATIHFLNRLRLESSPGTSAAAAVERATVLVGPAL
ILTTVVLACGLGVTVFSDLPSLRLFGWLSAFAMVAALIADLFILRPTAMWLISMAERLRRNRKPGPVV

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85315; Mature: 85315

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKNVKDAEVDELNRRRVSIAFGLERMGLIAIRAPILSCIVLAVLIVAAIFGIQRIKID
CCCCCCCCCCHHHHHHHEEHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEC
DSLSQLFRSDTKEFHQYEQVTKRFPSSEFDVLVVVEGKNLLARDNLEKLRDLVTDLQLVD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHC
GTRGLISLFSARQAPEPGKLPAALFPNELPEGEAYDKFIETVKSNEIIRGKLISEDGTLA
CCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEE
LIVLSLEPEIVGNNKLSETIAEIRKVMAEDLEGTGLSRQLSGVPVMQLEIRNAVERDGLI
EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEHHHHHHHHHHCCEE
YNIAGILAGCIIAILFFRKISFMIVAAFPPLLAILLSLGVLGWTGFSLNMFLNVMTPLIM
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VISFADSMQLTFAARDRLIAGEDKYTAFRNAVLVVGPACVLTHATAGISFIALQFSDSDL
HHHHHCCCEEEHHHHCCEECCCCHHHHHHCEEEEECHHHHHHHHHCCCEEEEEEECCCHH
IRAFGEAGLVATVIALIAVLSLVPVFGVLLVRNEQAFAAKFQSADLGVNALRRFCAFIAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
RMVGRPGLFSLLALLLVGGLGVIYANLEPRYRLADQVPDKQQAVQASDRLDAKLTGANPI
HHHCCCCHHHHHHHHHHCCHHEEEECCCCCHHHHHCCCCHHHHHHHHHCCCCEECCCCHH
DVLVEFPKGQTLYSPQTLQTIADVHAMVEKQAGVGNVWSLETLRRWLAEKAHTDDVATLK
HHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHH
EYVDVIPEHLVRRFISADQTAVVVSGRVPDLDSSEILPVVQKLDHALDAVRAKHPGYEVA
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
VTGLSAIAARNSADMISKLNHALTIEFALVAMFIGLAFRSVVVMLACILPGIFPVVLSGT
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWGLGEGLQFASAVALIVSFGLGLSATIHFLNRLRLESSPGTSAAAAVERATVLVGPAL
HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ILTTVVLACGLGVTVFSDLPSLRLFGWLSAFAMVAALIADLFILRPTAMWLISMAERLRR
HHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRKPGPVV
CCCCCCCC
>Mature Secondary Structure
MLDKNVKDAEVDELNRRRVSIAFGLERMGLIAIRAPILSCIVLAVLIVAAIFGIQRIKID
CCCCCCCCCCHHHHHHHEEHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEC
DSLSQLFRSDTKEFHQYEQVTKRFPSSEFDVLVVVEGKNLLARDNLEKLRDLVTDLQLVD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHC
GTRGLISLFSARQAPEPGKLPAALFPNELPEGEAYDKFIETVKSNEIIRGKLISEDGTLA
CCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEE
LIVLSLEPEIVGNNKLSETIAEIRKVMAEDLEGTGLSRQLSGVPVMQLEIRNAVERDGLI
EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEHHHHHHHHHHCCEE
YNIAGILAGCIIAILFFRKISFMIVAAFPPLLAILLSLGVLGWTGFSLNMFLNVMTPLIM
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VISFADSMQLTFAARDRLIAGEDKYTAFRNAVLVVGPACVLTHATAGISFIALQFSDSDL
HHHHHCCCEEEHHHHCCEECCCCHHHHHHCEEEEECHHHHHHHHHCCCEEEEEEECCCHH
IRAFGEAGLVATVIALIAVLSLVPVFGVLLVRNEQAFAAKFQSADLGVNALRRFCAFIAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
RMVGRPGLFSLLALLLVGGLGVIYANLEPRYRLADQVPDKQQAVQASDRLDAKLTGANPI
HHHCCCCHHHHHHHHHHCCHHEEEECCCCCHHHHHCCCCHHHHHHHHHCCCCEECCCCHH
DVLVEFPKGQTLYSPQTLQTIADVHAMVEKQAGVGNVWSLETLRRWLAEKAHTDDVATLK
HHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHH
EYVDVIPEHLVRRFISADQTAVVVSGRVPDLDSSEILPVVQKLDHALDAVRAKHPGYEVA
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
VTGLSAIAARNSADMISKLNHALTIEFALVAMFIGLAFRSVVVMLACILPGIFPVVLSGT
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWGLGEGLQFASAVALIVSFGLGLSATIHFLNRLRLESSPGTSAAAAVERATVLVGPAL
HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ILTTVVLACGLGVTVFSDLPSLRLFGWLSAFAMVAALIADLFILRPTAMWLISMAERLRR
HHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRKPGPVV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA