| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is eutC [H]
Identifier: 86748842
GI number: 86748842
Start: 1959698
End: 1960477
Strand: Direct
Name: eutC [H]
Synonym: RPB_1719
Alternate gene names: 86748842
Gene position: 1959698-1960477 (Clockwise)
Preceding gene: 86748841
Following gene: 86748843
Centisome position: 36.76
GC content: 72.18
Gene sequence:
>780_bases ATGACTTCGTCTCCGACTGCTCCGCCCGCGCTCAGCGATCTGCGCCGCCTGACCCCGGCCAGGGTCGCGCTCGGCCGGGC CGGCGTCAGCCTGACCACCGATGCGCTGCTGGATTTCACGCTGGCTCATGCCCGTGCCCGGGACGCGGTGCATGCCGCGT TCGACGCCGCCGCGGTCGCCGCAGAACTCGGCGCGCTCGGCCTGACGCCGTTGCAGGTGTCGAGCCGGGCACAGTCGCGC CGGGATTATCTCGCGCGGCCCGATCTCGGTCGCCAGCTCGACCCGGCGTCGCGGGCAATGCTCGAAGCTCATCCGTCCAC CGCTGATCTCGCTCTGGTGATCGGCGACGGGCTGTCGCCGGTGGCGGTGGCGGCCCAGGCGGGCGAGGTGGTGCGCCGGC TGCTACCTCGGCTTGCAGCGTCGGGGATCGGCGTCGGGCCGGCCGCCGTCGTCACCGGCGCCCGGGTGGCGCTCGGCGAC GAGATCGGTGCGCTGCTCGGCGCGCGGATCGTGCTGGTGCTGATCGGGGAGCGGCCGGGCTTGTCGGCGCCGGCCAGCCT CGGCGCTTATGTCACTCTCGGTCCGAGACCCGGCCGCACCGATGCCGACCGGAATTGCGTGTCCAACATCCATGCTGCCG GCATCAGCCCCGACGAGGCGGCGTTCAAGATTGCGTGGCTGGTACGTGAATCGATGGCGCGCGGTGCCTCCGGCGTTGCC TTGAAGGATGAAAGCGGCGAGGGTGGCTCCACACCGGCGGAGCTGCCCGGGCCAGGATGA
Upstream 100 bases:
>100_bases CGAACTATTCGATCCGGCTGCGTGAGGCCTCGGTGCCTGCGGAATAGGATTTGTCGCTCGACGTCCCTCGCGTCCCCTGT GCGGCCCAAAAGGGTGAACT
Downstream 100 bases:
>100_bases TCACGCTGGCGCGGTTCGCGTCGGTGCTGCGAATCTGGTGAACTGTGCCCCCGGCGCTCCAGCTGCGGAGCCACCGGGCC GGTAAATCAAGCAAACGATG
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTSSPTAPPALSDLRRLTPARVALGRAGVSLTTDALLDFTLAHARARDAVHAAFDAAAVAAELGALGLTPLQVSSRAQSR RDYLARPDLGRQLDPASRAMLEAHPSTADLALVIGDGLSPVAVAAQAGEVVRRLLPRLAASGIGVGPAAVVTGARVALGD EIGALLGARIVLVLIGERPGLSAPASLGAYVTLGPRPGRTDADRNCVSNIHAAGISPDEAAFKIAWLVRESMARGASGVA LKDESGEGGSTPAELPGPG
Sequences:
>Translated_259_residues MTSSPTAPPALSDLRRLTPARVALGRAGVSLTTDALLDFTLAHARARDAVHAAFDAAAVAAELGALGLTPLQVSSRAQSR RDYLARPDLGRQLDPASRAMLEAHPSTADLALVIGDGLSPVAVAAQAGEVVRRLLPRLAASGIGVGPAAVVTGARVALGD EIGALLGARIVLVLIGERPGLSAPASLGAYVTLGPRPGRTDADRNCVSNIHAAGISPDEAAFKIAWLVRESMARGASGVA LKDESGEGGSTPAELPGPG >Mature_258_residues TSSPTAPPALSDLRRLTPARVALGRAGVSLTTDALLDFTLAHARARDAVHAAFDAAAVAAELGALGLTPLQVSSRAQSRR DYLARPDLGRQLDPASRAMLEAHPSTADLALVIGDGLSPVAVAAQAGEVVRRLLPRLAASGIGVGPAAVVTGARVALGDE IGALLGARIVLVLIGERPGLSAPASLGAYVTLGPRPGRTDADRNCVSNIHAAGISPDEAAFKIAWLVRESMARGASGVAL KDESGEGGSTPAELPGPG
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=241, Percent_Identity=39.0041493775934, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 26111; Mature: 25980
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSPTAPPALSDLRRLTPARVALGRAGVSLTTDALLDFTLAHARARDAVHAAFDAAAVA CCCCCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELGALGLTPLQVSSRAQSRRDYLARPDLGRQLDPASRAMLEAHPSTADLALVIGDGLSP HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCH VAVAAQAGEVVRRLLPRLAASGIGVGPAAVVTGARVALGDEIGALLGARIVLVLIGERPG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCC LSAPASLGAYVTLGPRPGRTDADRNCVSNIHAAGISPDEAAFKIAWLVRESMARGASGVA CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEE LKDESGEGGSTPAELPGPG EECCCCCCCCCCCCCCCCC >Mature Secondary Structure TSSPTAPPALSDLRRLTPARVALGRAGVSLTTDALLDFTLAHARARDAVHAAFDAAAVA CCCCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELGALGLTPLQVSSRAQSRRDYLARPDLGRQLDPASRAMLEAHPSTADLALVIGDGLSP HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCH VAVAAQAGEVVRRLLPRLAASGIGVGPAAVVTGARVALGDEIGALLGARIVLVLIGERPG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCC LSAPASLGAYVTLGPRPGRTDADRNCVSNIHAAGISPDEAAFKIAWLVRESMARGASGVA CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEE LKDESGEGGSTPAELPGPG EECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA