| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86748813
Identifier: 86748813
GI number: 86748813
Start: 1925782
End: 1926474
Strand: Direct
Name: 86748813
Synonym: RPB_1690
Alternate gene names: NA
Gene position: 1925782-1926474 (Clockwise)
Preceding gene: 86748812
Following gene: 86748815
Centisome position: 36.12
GC content: 65.8
Gene sequence:
>693_bases ATGACCGAAAGTAATCAATCCGCCCCGATCAATGTGCTCGAAGAGTTGATGGCGGCGCGCTATTCGTGCCGGGCATTCAA GCCAGATCCGGTCCCGCGCGACACCATCGAGCGGGTATTGGCCGCGGCGCAGAAGACCGCGTCATGGTGCAACAGCCAGC CCTGGCAGGTGCTGATCACGTCGGGCGAGGCGACGAAGAGATTTCGCGACGTCATCTACGGCGTTGCGGCCAGCGGCGCG CCGTCGAGCGGCGATTTCGAATTTCCGCGGGAGTACCGCGGCGTGTATCTCGACCGCCGGCGCGAGAGCGGTTTCCAGCT CTACAACACGCTCGGCATCGCCAAGGGCGACAAGACGGCTTACGCCAAGCAGGCGCTGGAGAACTTCAATTTCTTCGGCG CGCCGCATGTCGCGATCATCACCACCGACGAGGCGCTCGGCGTCTACGGCGCGATCGACTGCGGCGGTTACGTCACCTCG TTCATGCTTGCGGCGCAGGCGCTCGGCCTCGCCACCGTGCCGCAGGCGGCGCTGGCGTTTCACTCCGGCGTGGTGCGCGA GCATTTCGGTCTCGGCGACGGCCGTCGCGTGGTGTGCGGCATCTCGTTCGGCTTCGCCGATCGCGAGCACAAGGCGAACA GCTACCGCACCAACCGCGCGCCGATCGGCGACGTGGCGACGTTCGTGGAGTGA
Upstream 100 bases:
>100_bases CCGGGCCCCGGATCGGCAGCGCACTACGCCGCAAAGCTGGCCGCTGCACCGCATCCGGGACACAATCAGTCCGACCTTCT CCAGAAAGATGGCGTTGCCG
Downstream 100 bases:
>100_bases AGGGAGCCGCGACGTGTTCCGGCGAGGGGCGTGGCTCGACCTCTGCCCGTCATTCGGTTGCGCGCCATCGGCTCGGCCTT TGGCCGGCCCGATCATGGGC
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; P-Nitrobenzoate Reductase; NfnB Protein; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Oxygen-Insensitive NAD(P)H Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTESNQSAPINVLEELMAARYSCRAFKPDPVPRDTIERVLAAAQKTASWCNSQPWQVLITSGEATKRFRDVIYGVAASGA PSSGDFEFPREYRGVYLDRRRESGFQLYNTLGIAKGDKTAYAKQALENFNFFGAPHVAIITTDEALGVYGAIDCGGYVTS FMLAAQALGLATVPQAALAFHSGVVREHFGLGDGRRVVCGISFGFADREHKANSYRTNRAPIGDVATFVE
Sequences:
>Translated_230_residues MTESNQSAPINVLEELMAARYSCRAFKPDPVPRDTIERVLAAAQKTASWCNSQPWQVLITSGEATKRFRDVIYGVAASGA PSSGDFEFPREYRGVYLDRRRESGFQLYNTLGIAKGDKTAYAKQALENFNFFGAPHVAIITTDEALGVYGAIDCGGYVTS FMLAAQALGLATVPQAALAFHSGVVREHFGLGDGRRVVCGISFGFADREHKANSYRTNRAPIGDVATFVE >Mature_229_residues TESNQSAPINVLEELMAARYSCRAFKPDPVPRDTIERVLAAAQKTASWCNSQPWQVLITSGEATKRFRDVIYGVAASGAP SSGDFEFPREYRGVYLDRRRESGFQLYNTLGIAKGDKTAYAKQALENFNFFGAPHVAIITTDEALGVYGAIDCGGYVTSF MLAAQALGLATVPQAALAFHSGVVREHFGLGDGRRVVCGISFGFADREHKANSYRTNRAPIGDVATFVE
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25016; Mature: 24885
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESNQSAPINVLEELMAARYSCRAFKPDPVPRDTIERVLAAAQKTASWCNSQPWQVLIT CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE SGEATKRFRDVIYGVAASGAPSSGDFEFPREYRGVYLDRRRESGFQLYNTLGIAKGDKTA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEECHHCCCHHHHHHHCCCCCCHHH YAKQALENFNFFGAPHVAIITTDEALGVYGAIDCGGYVTSFMLAAQALGLATVPQAALAF HHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHH HSGVVREHFGLGDGRRVVCGISFGFADREHKANSYRTNRAPIGDVATFVE HHHHHHHHCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure TESNQSAPINVLEELMAARYSCRAFKPDPVPRDTIERVLAAAQKTASWCNSQPWQVLIT CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE SGEATKRFRDVIYGVAASGAPSSGDFEFPREYRGVYLDRRRESGFQLYNTLGIAKGDKTA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEECHHCCCHHHHHHHCCCCCCHHH YAKQALENFNFFGAPHVAIITTDEALGVYGAIDCGGYVTSFMLAAQALGLATVPQAALAF HHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHH HSGVVREHFGLGDGRRVVCGISFGFADREHKANSYRTNRAPIGDVATFVE HHHHHHHHCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA