Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 86748812

GI number: 86748812

Start: 1924351

End: 1925598

Strand: Direct

Name: mmgC [H]

Synonym: RPB_1689

Alternate gene names: 86748812

Gene position: 1924351-1925598 (Clockwise)

Preceding gene: 86748811

Following gene: 86748813

Centisome position: 36.09

GC content: 65.22

Gene sequence:

>1248_bases
ATGAATTTCGACGATACCCCGCAGGAAGCCGAATTCCGCGCCAAGGCTCGCGCGTGGATCGACGCCAACGCGCCGAAGCA
GTACGAAGCGGAACTGACCAAGTCCGGCCTCGGCCGCATCAGCCTGAAGAACGCCGACATCGTCGAGGTCGGCAAGGCGT
GGCAGAAGAAGAAGGCCGAGGGCGGCTGGGCCTGCCTGACCTGGCCGAAGGAGTATGGCGGTCGCGGCGCCACGCCGATC
GAGAAGGTGATCTGGCAGCAGGAAGAGGGCGTGTACGGCAAGCTGACGCAGCCGTTCCAGATCGGCGAGGGCATGTGCGG
CCCGACGGTGATGGCCTATGCCAGCGAGGACGACAAGCGCAACTATCTGCCGAAGCTCGCCTCGGGCGAGAACATCTGGT
GCCAGTTGTTTTCCGAGCCGGCCGGTGGCTCGGACGTCGCCGGGCTGCGCACCCGCGCCGAGAAGGATGGTGACGACTGG
GTGATCAACGGCCAGAAGATCTGGACCTCGGGCGCGCACTACTCCGACTACGGCCTGCTGATTACCCGCACCGACCCCAA
TGTGCCCAAACACAAGGGCCTCACCATGTTCTTCCTCGACATGAAGAGCGAAGGCGTCGAGGTCAAGCCGATCAAGCAGG
CCAATGGCATGCAGGAATTCAACGAGGTGTTCTTCACCAATGTGCGGATTCCGGACAGCCAGCGGCTCGGCGCCGTCGGC
GACGGCTGGAACGTGTCGCTGACCACGCTGATGAACGAGCGGATGTCGATCGGCGCGCGGCTCGCCACCGGCTTTCCGGA
GATCTTCGATCTCTGCTCGAACCTCGTCACCGCCGACGGCCTTGCGATCGACGATTCCGCCGTGCGGAGCAAACTCGCGA
ACTGGGCGGTCAAGGCGAGCGGGCTGAAGTACACGTCGTATCGCTCGATCTCGGCGCTGTCGAAGGGCGAACGGCCGGGC
CCCGAGAACTCGATCGGCAAGCTGGTCGCGGGGCCGATGCTGCAGGACATCGCCGCGTTCGCGATGGACCTCGAAGGCGC
GGCCGGAATGTTCACCGATCCCCAGGAGGCCGAGGCCGGCGGCAGCTTCCAGGCGATGCTGCTGTCGTCGCCGTCGATGC
GGATCGCCGGCGGCACCGACGAAATCCTGCGCAACATCATCGCCGAGCGCGTGCTTGGCTTGCCCGGCGACATCCGCGTC
GACAAGGACGTGCCGTTCAACCAGATCCCGACACGGGGGCGCGGTTAA

Upstream 100 bases:

>100_bases
CCGCGCCGGGCGCTGCCGGGCGAGCGCCTCAGGATGACGTGGGAATAGGTGGCGGCCTTCCGTGGAAGCGCCGCCGAATA
CAGAACAGGAGTGAGCCACC

Downstream 100 bases:

>100_bases
GGACCCTGCGTCCCGGACGCGGCGCGGCATTCTTCATGCCGCTCCGCAGATCCGGGACCCCGGTTGGGGCGCCGGCAACA
TCACCGGGCCCCGGATCGGC

Product: Acyl-CoA dehydrogenase-like

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MNFDDTPQEAEFRAKARAWIDANAPKQYEAELTKSGLGRISLKNADIVEVGKAWQKKKAEGGWACLTWPKEYGGRGATPI
EKVIWQQEEGVYGKLTQPFQIGEGMCGPTVMAYASEDDKRNYLPKLASGENIWCQLFSEPAGGSDVAGLRTRAEKDGDDW
VINGQKIWTSGAHYSDYGLLITRTDPNVPKHKGLTMFFLDMKSEGVEVKPIKQANGMQEFNEVFFTNVRIPDSQRLGAVG
DGWNVSLTTLMNERMSIGARLATGFPEIFDLCSNLVTADGLAIDDSAVRSKLANWAVKASGLKYTSYRSISALSKGERPG
PENSIGKLVAGPMLQDIAAFAMDLEGAAGMFTDPQEAEAGGSFQAMLLSSPSMRIAGGTDEILRNIIAERVLGLPGDIRV
DKDVPFNQIPTRGRG

Sequences:

>Translated_415_residues
MNFDDTPQEAEFRAKARAWIDANAPKQYEAELTKSGLGRISLKNADIVEVGKAWQKKKAEGGWACLTWPKEYGGRGATPI
EKVIWQQEEGVYGKLTQPFQIGEGMCGPTVMAYASEDDKRNYLPKLASGENIWCQLFSEPAGGSDVAGLRTRAEKDGDDW
VINGQKIWTSGAHYSDYGLLITRTDPNVPKHKGLTMFFLDMKSEGVEVKPIKQANGMQEFNEVFFTNVRIPDSQRLGAVG
DGWNVSLTTLMNERMSIGARLATGFPEIFDLCSNLVTADGLAIDDSAVRSKLANWAVKASGLKYTSYRSISALSKGERPG
PENSIGKLVAGPMLQDIAAFAMDLEGAAGMFTDPQEAEAGGSFQAMLLSSPSMRIAGGTDEILRNIIAERVLGLPGDIRV
DKDVPFNQIPTRGRG
>Mature_415_residues
MNFDDTPQEAEFRAKARAWIDANAPKQYEAELTKSGLGRISLKNADIVEVGKAWQKKKAEGGWACLTWPKEYGGRGATPI
EKVIWQQEEGVYGKLTQPFQIGEGMCGPTVMAYASEDDKRNYLPKLASGENIWCQLFSEPAGGSDVAGLRTRAEKDGDDW
VINGQKIWTSGAHYSDYGLLITRTDPNVPKHKGLTMFFLDMKSEGVEVKPIKQANGMQEFNEVFFTNVRIPDSQRLGAVG
DGWNVSLTTLMNERMSIGARLATGFPEIFDLCSNLVTADGLAIDDSAVRSKLANWAVKASGLKYTSYRSISALSKGERPG
PENSIGKLVAGPMLQDIAAFAMDLEGAAGMFTDPQEAEAGGSFQAMLLSSPSMRIAGGTDEILRNIIAERVLGLPGDIRV
DKDVPFNQIPTRGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557231, Length=396, Percent_Identity=23.7373737373737, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI187960098, Length=396, Percent_Identity=23.7373737373737, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI4501859, Length=290, Percent_Identity=25.8620689655172, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI4501857, Length=318, Percent_Identity=24.8427672955975, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI21361497, Length=354, Percent_Identity=26.5536723163842, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI226958412, Length=196, Percent_Identity=30.6122448979592, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI226958414, Length=196, Percent_Identity=30.6122448979592, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI76496475, Length=353, Percent_Identity=26.3456090651558, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4557235, Length=353, Percent_Identity=26.3456090651558, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4557233, Length=356, Percent_Identity=25.2808988764045, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI7656849, Length=349, Percent_Identity=22.6361031518625, Blast_Score=86, Evalue=8e-17,
Organism=Escherichia coli, GI87081958, Length=400, Percent_Identity=24.25, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786223, Length=336, Percent_Identity=22.0238095238095, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17570075, Length=413, Percent_Identity=27.3607748184019, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17538396, Length=205, Percent_Identity=33.6585365853659, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=271, Percent_Identity=29.1512915129151, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=343, Percent_Identity=28.2798833819242, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71990804, Length=205, Percent_Identity=30.2439024390244, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=329, Percent_Identity=23.4042553191489, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=205, Percent_Identity=28.780487804878, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=335, Percent_Identity=25.3731343283582, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=196, Percent_Identity=29.0816326530612, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71982178, Length=216, Percent_Identity=27.3148148148148, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=327, Percent_Identity=23.2415902140673, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=348, Percent_Identity=24.7126436781609, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71985184, Length=291, Percent_Identity=25.4295532646048, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=157, Percent_Identity=31.8471337579618, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24660351, Length=312, Percent_Identity=24.3589743589744, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21355753, Length=345, Percent_Identity=24.3478260869565, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281363737, Length=348, Percent_Identity=26.1494252873563, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24646207, Length=346, Percent_Identity=26.5895953757225, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24666513, Length=306, Percent_Identity=25.1633986928105, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21356377, Length=214, Percent_Identity=23.8317757009346, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.3

Molecular weight: Translated: 45185; Mature: 45185

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDDTPQEAEFRAKARAWIDANAPKQYEAELTKSGLGRISLKNADIVEVGKAWQKKKAE
CCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCC
GGWACLTWPKEYGGRGATPIEKVIWQQEEGVYGKLTQPFQIGEGMCGPTVMAYASEDDKR
CCEEEEECCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHH
NYLPKLASGENIWCQLFSEPAGGSDVAGLRTRAEKDGDDWVINGQKIWTSGAHYSDYGLL
HCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEECCCEEEECCCCCCCCEEE
ITRTDPNVPKHKGLTMFFLDMKSEGVEVKPIKQANGMQEFNEVFFTNVRIPDSQRLGAVG
EECCCCCCCCCCCCEEEEEEECCCCCEEEECHHHCCHHHHHHHHEEEEECCCCCCCCCCC
DGWNVSLTTLMNERMSIGARLATGFPEIFDLCSNLVTADGLAIDDSAVRSKLANWAVKAS
CCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHEECC
GLKYTSYRSISALSKGERPGPENSIGKLVAGPMLQDIAAFAMDLEGAAGMFTDPQEAEAG
CCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
GSFQAMLLSSPSMRIAGGTDEILRNIIAERVLGLPGDIRVDKDVPFNQIPTRGRG
CCEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNFDDTPQEAEFRAKARAWIDANAPKQYEAELTKSGLGRISLKNADIVEVGKAWQKKKAE
CCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCC
GGWACLTWPKEYGGRGATPIEKVIWQQEEGVYGKLTQPFQIGEGMCGPTVMAYASEDDKR
CCEEEEECCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHH
NYLPKLASGENIWCQLFSEPAGGSDVAGLRTRAEKDGDDWVINGQKIWTSGAHYSDYGLL
HCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEECCCEEEECCCCCCCCEEE
ITRTDPNVPKHKGLTMFFLDMKSEGVEVKPIKQANGMQEFNEVFFTNVRIPDSQRLGAVG
EECCCCCCCCCCCCEEEEEEECCCCCEEEECHHHCCHHHHHHHHEEEEECCCCCCCCCCC
DGWNVSLTTLMNERMSIGARLATGFPEIFDLCSNLVTADGLAIDDSAVRSKLANWAVKAS
CCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHEECC
GLKYTSYRSISALSKGERPGPENSIGKLVAGPMLQDIAAFAMDLEGAAGMFTDPQEAEAG
CCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
GSFQAMLLSSPSMRIAGGTDEILRNIIAERVLGLPGDIRVDKDVPFNQIPTRGRG
CCEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]