Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86748768

Identifier: 86748768

GI number: 86748768

Start: 1874664

End: 1875716

Strand: Direct

Name: 86748768

Synonym: RPB_1645

Alternate gene names: NA

Gene position: 1874664-1875716 (Clockwise)

Preceding gene: 86748767

Following gene: 86748769

Centisome position: 35.16

GC content: 65.43

Gene sequence:

>1053_bases
ATGACGACTTTAGAGAGCAAAGTCGGGCAGGAGCCACGGACCGCCGTCTGGCTGGCCGGAACGGCGGCATTTCTGGTGGC
CTGGGGCCTGATCTACGCGCAACTGCAGCCGTTCTCCAAATGGGCGGTCGGCCTGCTTCCGCTCGAATCCGGCAGTCATG
CGGCGGAGGCTATCGAATTCTTCGTCTACGACACTCCGAAGGTGTTGATGCTGCTGACCCTCGTGGTGTTCGGTATGGGC
GTGCTGCGGAGCTGGTTTTCGCCGGAGCGGACCCGCGCGCTGCTCGCCGGCCGGCGTGAAGGTGTCGGCAACGTCGCCGC
CGCCGGGCTGGGCATCCTCACGCCGTTCTGCTCCTGCTCGGCGGTGCCGCTGTTCATCGGCTTTGTCAGTGCCGGCGTGC
CGCTCGGGGTGACCTTCTCGTTCCTGATCGCCGCGCCGATGATTAACGAAGTCGCGCTCGGATTGCTGTTCGTTCTGCTG
GGCTGGAAAGTGGCGCTCGCCTATCTGGGCTTCGGGCTCGGCATTGCGATCGTCGCGGGCTGGGTGATCGGGCGCTTCCA
CCTCGAAGGCTGGCTGCAGGACTGGGTCCGCAACGTCCGTTCAAGTGCCGCCGAGATCCCGTCGTCGACCGTGACGTTGG
TCGATCGTCTCCGGGCGGGGATCGAGGCCGTGGTCGACATCGTCGGCAGGGTCTGGATCTGGGTCATCGCCGGCATCGCT
GTCGGCGCCTTCATTCATGGCTATGTGCCCGCCGACCTGCTGGCCTCGATCATGGGGCGCGACGCGTGGTGGTCCGTGCC
CGCGGCGGTCTTGCTCGGCATTCCGATGTATTCCAATGCCGCGGGTATCATTCCGGTGGTCGAGGCGCTGATCGGCAAGG
GCGCCGCACTCGGCACCGTGCTGGCCTTCATGATTAGCGTCATCGCGCTGTCGGCGCCGGAACTGATCATCCTGCACAAG
GTGCTGACCCCCCGACTGATCGCCGTGTTCGTCGCTGTCGTGGCGGCCGGCATCCTGGCGGTGGGGTTCCTGTTCAACGC
ATTGTTCACGTAG

Upstream 100 bases:

>100_bases
AGTGGGTTCGCTACCGGCGCAATCCAAATCTGGATCCGAAAATTATCGCCGTGGTCGAGGCCGTGCTGGCGCTTCCGGCG
CGCGACAGGAGGGCGGCCGC

Downstream 100 bases:

>100_bases
GAGCGCGTCGTCATGAAGGACGTCAAGGTACTCGGTCCCGGCTGCAAACGTTGCGTCACGACCGCCGAGATGGTGCAGGG
GGAGGCCGACAGGCTCGGCG

Product: permease

Products: NA

Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTTLESKVGQEPRTAVWLAGTAAFLVAWGLIYAQLQPFSKWAVGLLPLESGSHAAEAIEFFVYDTPKVLMLLTLVVFGMG
VLRSWFSPERTRALLAGRREGVGNVAAAGLGILTPFCSCSAVPLFIGFVSAGVPLGVTFSFLIAAPMINEVALGLLFVLL
GWKVALAYLGFGLGIAIVAGWVIGRFHLEGWLQDWVRNVRSSAAEIPSSTVTLVDRLRAGIEAVVDIVGRVWIWVIAGIA
VGAFIHGYVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALIGKGAALGTVLAFMISVIALSAPELIILHK
VLTPRLIAVFVAVVAAGILAVGFLFNALFT

Sequences:

>Translated_350_residues
MTTLESKVGQEPRTAVWLAGTAAFLVAWGLIYAQLQPFSKWAVGLLPLESGSHAAEAIEFFVYDTPKVLMLLTLVVFGMG
VLRSWFSPERTRALLAGRREGVGNVAAAGLGILTPFCSCSAVPLFIGFVSAGVPLGVTFSFLIAAPMINEVALGLLFVLL
GWKVALAYLGFGLGIAIVAGWVIGRFHLEGWLQDWVRNVRSSAAEIPSSTVTLVDRLRAGIEAVVDIVGRVWIWVIAGIA
VGAFIHGYVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALIGKGAALGTVLAFMISVIALSAPELIILHK
VLTPRLIAVFVAVVAAGILAVGFLFNALFT
>Mature_349_residues
TTLESKVGQEPRTAVWLAGTAAFLVAWGLIYAQLQPFSKWAVGLLPLESGSHAAEAIEFFVYDTPKVLMLLTLVVFGMGV
LRSWFSPERTRALLAGRREGVGNVAAAGLGILTPFCSCSAVPLFIGFVSAGVPLGVTFSFLIAAPMINEVALGLLFVLLG
WKVALAYLGFGLGIAIVAGWVIGRFHLEGWLQDWVRNVRSSAAEIPSSTVTLVDRLRAGIEAVVDIVGRVWIWVIAGIAV
GAFIHGYVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALIGKGAALGTVLAFMISVIALSAPELIILHKV
LTPRLIAVFVAVVAAGILAVGFLFNALFT

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36961; Mature: 36830

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLESKVGQEPRTAVWLAGTAAFLVAWGLIYAQLQPFSKWAVGLLPLESGSHAAEAIEF
CCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCCHHHHHHHH
FVYDTPKVLMLLTLVVFGMGVLRSWFSPERTRALLAGRREGVGNVAAAGLGILTPFCSCS
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
AVPLFIGFVSAGVPLGVTFSFLIAAPMINEVALGLLFVLLGWKVALAYLGFGLGIAIVAG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVIGRFHLEGWLQDWVRNVRSSAAEIPSSTVTLVDRLRAGIEAVVDIVGRVWIWVIAGIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGAFIHGYVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALIGKGAALGTV
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHH
LAFMISVIALSAPELIILHKVLTPRLIAVFVAVVAAGILAVGFLFNALFT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTLESKVGQEPRTAVWLAGTAAFLVAWGLIYAQLQPFSKWAVGLLPLESGSHAAEAIEF
CCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCCHHHHHHHH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HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA