| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ahcY [H]
Identifier: 86748714
GI number: 86748714
Start: 1790547
End: 1791962
Strand: Direct
Name: ahcY [H]
Synonym: RPB_1589
Alternate gene names: 86748714
Gene position: 1790547-1791962 (Clockwise)
Preceding gene: 86748713
Following gene: 86748715
Centisome position: 33.58
GC content: 63.77
Gene sequence:
>1416_bases ATGACCGCCAAGTTCACCGATTACATCGTCAAGGACATCGGCCTCGCCGAGTTCGGCCGCAAGGAGATCTCGCTGGCCGA GACCGAAATGCCCGGCCTGATGGCGACGCGCGAGGAATACGGCCCCAAGCAGCCCCTGAAGGGCGCGCGGATCGCCGGCT CGCTGCACATGACGATCCAGACCGCGGTGCTGATCGAGACGCTGGTCGCGCTCGGCGCCGACGTGCGCTGGGTGTCGTGC AACATCTATTCGACCCAGGACCACGCCGCCGCGGCGATCGCCGCCGCCGGCATTCCGGTGTTCGCCATCAAGGGCGAGAG CCTGGAAGACTATTGGGACTACACCGCCCGGATGTTCGACTGGCACGGCGGCGGCACCCCGAACATGATCCTCGATGACG GCGGCGACGCCACCATGTACGTCCATCTCGGCCTGCGCGCCGAGAACGGCGACACCGCCTTCCTCGACAAGCCCGGCTCC GACGAGGAGGTGATCTTCTTCGCGCTCTTGAAGAAGCAGCTCAAGGAGAAGCCGAAGGGCTACTTCGCCGAGATCGCCAA GAACATCCGGGGCGTCTCCGAAGAGACCACCACGGGCGTGCACCGGCTCTACGACATGCAGAAGGCCGGCACGCTGCTGT GGCCGGCCATCAACGTCAACGACTCGGTCACCAAGTCGAAATTCGACAACCTCTATGGCTGCCGTGAGTCGCTGGTCGAC GGCATCCGCCGCGGCACCGACGTGATGCTGTCCGGCAAGGTGGCGATGGTCGCGGGCTTCGGCGACGTCGGCAAGGGCTC GGCCGCCTCGCTGCGCCAGGCCGGCTGCCGTGTGATGGTGTCCGAAGTCGATCCGATCTGCGCGCTGCAGGCGGCGATGG AAGGCTATCAGGTCGTGACCATGGAAGACGCGGCGCCGCTCGCCGACATCTTCGTCACCGCCACCGGCAACAAGGACATC ATCACCATCGAGCACATGCGCGCGATGAAGGATCGCGCCATCGTCTGCAACATCGGCCATTTCGACAACGAGATCCAGAT CGCGCATCTCAAGAACCTGAAGTGGGACAACATCAAGCCGCAGGTCGACGAGATCACCTTCCCGGACGGCAAGCGCATGA TCCTGCTGTCCGAAGGCCGCCTCGTGAACCTCGGCAACGCGATGGGGCATCCGTCCTTCGTGATGTCGGCCTCCTTCACC AACCAGACGCTGGCGCAGATCGAACTGTTCGCCAACAACAAGGACGGCAAGTACAAGAAGGAAGTCTACGTCCTGCCGAA GTCGCTGGATGAGAAGGTCGCCCGCCTGCACCTCGCCAAGATCGGCGTCAAGCTCACCGAACTGCGCAAGGACCAGGCCG ACTACATCGGCGTCAAGGTCGAGGGGCCGTTCAAGGCGGATCATTACCGGTATTGA
Upstream 100 bases:
>100_bases CACCTCAGGATGACGCTGAGCCTGCAGGACCGCCTCGAAATGCCCCAATCAGTTTGTAGTGCTCAGTTCGACTGACACAG ACATCAGGAAACCCATCCGC
Downstream 100 bases:
>100_bases GATTCATCGTAATACGGAAATGGCCGGGGGATTCCCCGGCCATTTTTTTTGCTAGCATTTCTCTATTTTCAAGTGTGATT GCGTCTGGGTGCAAATTCAG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MTAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSC NIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAENGDTAFLDKPGS DEEVIFFALLKKQLKEKPKGYFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDSVTKSKFDNLYGCRESLVD GIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYQVVTMEDAAPLADIFVTATGNKDI ITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKNLKWDNIKPQVDEITFPDGKRMILLSEGRLVNLGNAMGHPSFVMSASFT NQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY
Sequences:
>Translated_471_residues MTAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSC NIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAENGDTAFLDKPGS DEEVIFFALLKKQLKEKPKGYFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDSVTKSKFDNLYGCRESLVD GIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYQVVTMEDAAPLADIFVTATGNKDI ITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKNLKWDNIKPQVDEITFPDGKRMILLSEGRLVNLGNAMGHPSFVMSASFT NQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY >Mature_470_residues TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCN IYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAENGDTAFLDKPGSD EEVIFFALLKKQLKEKPKGYFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDSVTKSKFDNLYGCRESLVDG IRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYQVVTMEDAAPLADIFVTATGNKDII TIEHMRAMKDRAIVCNIGHFDNEIQIAHLKNLKWDNIKPQVDEITFPDGKRMILLSEGRLVNLGNAMGHPSFVMSASFTN QTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=467, Percent_Identity=57.8158458244111, Blast_Score=499, Evalue=1e-141, Organism=Homo sapiens, GI239937451, Length=445, Percent_Identity=57.752808988764, Blast_Score=474, Evalue=1e-134, Organism=Homo sapiens, GI298286489, Length=468, Percent_Identity=48.7179487179487, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI195539337, Length=468, Percent_Identity=48.7179487179487, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI24308043, Length=468, Percent_Identity=48.7179487179487, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI195539349, Length=468, Percent_Identity=48.7179487179487, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI21361647, Length=471, Percent_Identity=48.1953290870488, Blast_Score=435, Evalue=1e-122, Organism=Caenorhabditis elegans, GI17506425, Length=467, Percent_Identity=60.1713062098501, Blast_Score=534, Evalue=1e-152, Organism=Saccharomyces cerevisiae, GI6320882, Length=486, Percent_Identity=59.6707818930041, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI24642172, Length=466, Percent_Identity=61.1587982832618, Blast_Score=517, Evalue=1e-147, Organism=Drosophila melanogaster, GI24656245, Length=472, Percent_Identity=48.9406779661017, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI45553387, Length=468, Percent_Identity=50, Blast_Score=431, Evalue=1e-121, Organism=Drosophila melanogaster, GI45553385, Length=467, Percent_Identity=49.8929336188437, Blast_Score=429, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51797; Mature: 51666
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQ CCCCHHHHHHHHCCHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCEEECEEEEHHH TAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFD HHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHEEE WHGGGTPNMILDDGGDATMYVHLGLRAENGDTAFLDKPGSDEEVIFFALLKKQLKEKPKG ECCCCCCCEEEECCCCEEEEEEEEEEECCCCEEEECCCCCCCCEEHHHHHHHHHHHCCCH YFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDSVTKSKFDNLYGCRESLVD HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH GIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYQVVT HHHCCCCEEEECCEEEEEECCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCCEEEEE MEDAAPLADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKNLKWDNIKP ECCCCCEEEEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCC QVDEITFPDGKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKK CCCEEECCCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEE EVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY EEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQ CCCHHHHHHHHCCHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCEEECEEEEHHH TAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFD HHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHEEE WHGGGTPNMILDDGGDATMYVHLGLRAENGDTAFLDKPGSDEEVIFFALLKKQLKEKPKG ECCCCCCCEEEECCCCEEEEEEEEEEECCCCEEEECCCCCCCCEEHHHHHHHHHHHCCCH YFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDSVTKSKFDNLYGCRESLVD HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH GIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYQVVT HHHCCCCEEEECCEEEEEECCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCCEEEEE MEDAAPLADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKNLKWDNIKP ECCCCCEEEEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCC QVDEITFPDGKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKK CCCEEECCCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEE EVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY EEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]