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The map label for this gene is frc [H]

Identifier: 86748700

GI number: 86748700

Start: 1773582

End: 1776026

Strand: Reverse

Name: frc [H]

Synonym: RPB_1575

Alternate gene names: 86748700

Gene position: 1776026-1773582 (Counterclockwise)

Preceding gene: 86748701

Following gene: 86748699

Centisome position: 33.31

GC content: 70.02

Gene sequence:

>2445_bases
ATGCAGGCGCTGCCGCTGTCGGAATTGCGCGTCGTGGAATTGGGATCCGGCGACGCGCTCGCATACTGCGGCAAGCTGTT
CGCCGATTTCGGCGCGGAGGTCGTCAAGGTCGAGCCGCCGGGCGGCGATCCAGACCGGCAGGTCGCACCGCGGGTCGAGC
GCGGCGGAGGGCGCGAGAGCGCCAGCTTCGCCTGGCTGAACAGCAACAAGCGCAGCGTCACCGCGAAGCTCGACGATCCG
GCCGGTGTGGTGCGGATCGAACGCTTACTTGCGGACGCCGACCTGCTGCTCGACGCCCGGCATCCGGTCGAGATCGAGGC
TTCGACGCTGTCGCATCGCCGTCTGCGTGAAACGCAGCCCGGCCTCGCTATCACCGCGCTGTCGTGGTTCGGCGAACACG
GCCCGTATCGCGATTATCTGGCGACCGATGCGGTCTGCCGCAGCCTCGCCGGGCTGGTGAAACTGGTCGGCCCGGCGGAA
GGCCCACCGGTGCTGCCGCGCGACGGCCAGACCGCGGTGATCGCCGGCCTCACCGCCTTCATCCCGACGCTCGCCGGATT
GTTCGCCCGCGCCGATCAGGGCGCGCGCCGGTTCGCGGTCAACGCCTTCGAGGCGACGCTGCAGATCGCCGAATTCGACA
TCGCGCTGGCGCTGGAGGCCGGCTCGACGCGGCCGCGGATCGGGCTGAACCGGTTCGGCCGCGGCTTTCCGGTCGGCAAC
TACGCGACCAAGGACGGCTGGCTCGGCGTCACCGTGGTGACGCCGGCGCAATGGCTCGGCTTCTGCGCGATGATCGGCCT
GCCGGAGCTGGGCCCCGATCCGCGCTATTCGGCGACCAATGATCGCTTCATCCATGCCGACGAACTCAACTCGATCATCC
GGCCGGTGCTGATGCACAGGACCGCGATGGACTGGTTCGAGCGCGGCCTCGCGTTGCGGCTGCCGCTGGCGCTGGTGCCG
GACATGGCGCAATTGCTGGCGCAGCCGGTGATGCGCGAACGCGGCGCCTTCGCCACCGTCGAGATCGGCACGGCGTCGTT
CGAGGCGCCGGTGCTGCCGCAGCGGCTGACGGCATCGCCCGGCAAGCCCAATGGCCGCGCGCCGCTGTGCGGCGAGCACG
ATGGCGTGGAGCTGTCGCCGCATCGGCGGATCGCAGATCGCGCAGCAGGCGCGAGCGAGGCGTTGCCGCTGTCAGGCATT
CGCATCGTCGATCTCACCATGGGCTGGGCCGGGCCATCGGCGGTGCGCCAGCTCGGCGATCTCGGCGCCGATATCGTCAA
GGTGGAGTCGTGCCAGTATCCGGACTGGTTCCGCGGCACCGATCCGCGCGGGCCGTATCATCCCGAACGCACTTACGAGA
AGACCTACTGGTTCCAGACGATGAACCGCAACAAGCGCGGCATCACGCTGGATCTGACCACCGCAGACGGCCGCGCGGCG
CTGACGAAACTACTCGCCGGCGCCGATGCGGTGATCGACAATTACGCCGCCGACGTGCTGCCGCGGCTCGGCCTCGACGT
CGCCGCGATGCAGGCGATCAATCCGCGGCTGGTGATCGTGACGATGCCGGCCTTCGGCCTGACCGGCCGCTGGAGCGCCG
CCCGCGCCTATGGCTCGACGCTGGAACAGGCGTCCGGGCTGCCGTCGGTGACCGGCCGCGACGGCGATCCGCCGACGATG
CAGCACGCCGCGCTCGGCGATCCGGTCGGCGGACTGAACGCCGCCGCCGCGCTGATGCTCGGCCTGACGTATCAACAGCG
CACCGGCGACGGCCAGCACATCGATCTGTCGCAGGTCGAATGCATGTTGCCGATGCTGGCGTCCTCGATCATCGAACAAT
CGGTGACGGGACACACCGGCCCGCGGCTCGGCAACCGGCATCCGCGCTTCGTGCCGAGCGGTTGCTTCCCCTGCGCCGGC
GAGGATCAGTGGGTGACGCTGGTGGTGCAGAGCGACGCGCAATGGGCGGCGCTGTGCCGGGTGATGCACCGGCCGGATCT
CGCCCACGATCCCGCGCTCGCCACCGCCGATGGCCGCCGCGCCGACGAGGATCGCATCGAGGTCGCGGTCCGGCACTGGA
CCTCGACCGTCCGGCCGGAACTGGCGATGGTGACGCTGCAGGAGGCCGCCATCGCCGCCGGCGTCGCGCGGCTGCCGGTC
GATCTGGTCGGCGATGCGCATCTGCTCGCGACCGGGCACTGGCAGCCGGTGGTGCGGCCGTTCATGGGGCCGCATCTGCT
GCCGTCGGTGTCGTATCGCGAAGGCTTCGCCGAACGGCCCTACCCGATCGAACGGCTGGCTCCCACCCTCGGCCAGCATA
ATCATGAGGTGCTGCGGGAGATCGGACTCACCGAGGCCGAGATCGGTGACCTGCACGATCGCGGCGTGATCGGGCGAGTG
GCGACTGCCAAAAAGAGCGGCGGCGCCCGCCAGGCGGCCGAATGA

Upstream 100 bases:

>100_bases
CGCTGAACCGCCGAGCGTCGCGCACTGCACCATCATCGTGACTTGACGGTTTCGTTCGCGCCGCCAAGATGCGGGCAACG
AAAAACAAGGTCGGGTGGAC

Downstream 100 bases:

>100_bases
ACCGCCCTCCATACCTCGATACGACGGCGACAGCCGCGTCCCGCCCGCCCGTGCAGGCACGACAAGGTGGAAACGCCGCG
TCCGACATCCGGACAAGTCT

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 814; Mature: 814

Protein sequence:

>814_residues
MQALPLSELRVVELGSGDALAYCGKLFADFGAEVVKVEPPGGDPDRQVAPRVERGGGRESASFAWLNSNKRSVTAKLDDP
AGVVRIERLLADADLLLDARHPVEIEASTLSHRRLRETQPGLAITALSWFGEHGPYRDYLATDAVCRSLAGLVKLVGPAE
GPPVLPRDGQTAVIAGLTAFIPTLAGLFARADQGARRFAVNAFEATLQIAEFDIALALEAGSTRPRIGLNRFGRGFPVGN
YATKDGWLGVTVVTPAQWLGFCAMIGLPELGPDPRYSATNDRFIHADELNSIIRPVLMHRTAMDWFERGLALRLPLALVP
DMAQLLAQPVMRERGAFATVEIGTASFEAPVLPQRLTASPGKPNGRAPLCGEHDGVELSPHRRIADRAAGASEALPLSGI
RIVDLTMGWAGPSAVRQLGDLGADIVKVESCQYPDWFRGTDPRGPYHPERTYEKTYWFQTMNRNKRGITLDLTTADGRAA
LTKLLAGADAVIDNYAADVLPRLGLDVAAMQAINPRLVIVTMPAFGLTGRWSAARAYGSTLEQASGLPSVTGRDGDPPTM
QHAALGDPVGGLNAAAALMLGLTYQQRTGDGQHIDLSQVECMLPMLASSIIEQSVTGHTGPRLGNRHPRFVPSGCFPCAG
EDQWVTLVVQSDAQWAALCRVMHRPDLAHDPALATADGRRADEDRIEVAVRHWTSTVRPELAMVTLQEAAIAAGVARLPV
DLVGDAHLLATGHWQPVVRPFMGPHLLPSVSYREGFAERPYPIERLAPTLGQHNHEVLREIGLTEAEIGDLHDRGVIGRV
ATAKKSGGARQAAE

Sequences:

>Translated_814_residues
MQALPLSELRVVELGSGDALAYCGKLFADFGAEVVKVEPPGGDPDRQVAPRVERGGGRESASFAWLNSNKRSVTAKLDDP
AGVVRIERLLADADLLLDARHPVEIEASTLSHRRLRETQPGLAITALSWFGEHGPYRDYLATDAVCRSLAGLVKLVGPAE
GPPVLPRDGQTAVIAGLTAFIPTLAGLFARADQGARRFAVNAFEATLQIAEFDIALALEAGSTRPRIGLNRFGRGFPVGN
YATKDGWLGVTVVTPAQWLGFCAMIGLPELGPDPRYSATNDRFIHADELNSIIRPVLMHRTAMDWFERGLALRLPLALVP
DMAQLLAQPVMRERGAFATVEIGTASFEAPVLPQRLTASPGKPNGRAPLCGEHDGVELSPHRRIADRAAGASEALPLSGI
RIVDLTMGWAGPSAVRQLGDLGADIVKVESCQYPDWFRGTDPRGPYHPERTYEKTYWFQTMNRNKRGITLDLTTADGRAA
LTKLLAGADAVIDNYAADVLPRLGLDVAAMQAINPRLVIVTMPAFGLTGRWSAARAYGSTLEQASGLPSVTGRDGDPPTM
QHAALGDPVGGLNAAAALMLGLTYQQRTGDGQHIDLSQVECMLPMLASSIIEQSVTGHTGPRLGNRHPRFVPSGCFPCAG
EDQWVTLVVQSDAQWAALCRVMHRPDLAHDPALATADGRRADEDRIEVAVRHWTSTVRPELAMVTLQEAAIAAGVARLPV
DLVGDAHLLATGHWQPVVRPFMGPHLLPSVSYREGFAERPYPIERLAPTLGQHNHEVLREIGLTEAEIGDLHDRGVIGRV
ATAKKSGGARQAAE
>Mature_814_residues
MQALPLSELRVVELGSGDALAYCGKLFADFGAEVVKVEPPGGDPDRQVAPRVERGGGRESASFAWLNSNKRSVTAKLDDP
AGVVRIERLLADADLLLDARHPVEIEASTLSHRRLRETQPGLAITALSWFGEHGPYRDYLATDAVCRSLAGLVKLVGPAE
GPPVLPRDGQTAVIAGLTAFIPTLAGLFARADQGARRFAVNAFEATLQIAEFDIALALEAGSTRPRIGLNRFGRGFPVGN
YATKDGWLGVTVVTPAQWLGFCAMIGLPELGPDPRYSATNDRFIHADELNSIIRPVLMHRTAMDWFERGLALRLPLALVP
DMAQLLAQPVMRERGAFATVEIGTASFEAPVLPQRLTASPGKPNGRAPLCGEHDGVELSPHRRIADRAAGASEALPLSGI
RIVDLTMGWAGPSAVRQLGDLGADIVKVESCQYPDWFRGTDPRGPYHPERTYEKTYWFQTMNRNKRGITLDLTTADGRAA
LTKLLAGADAVIDNYAADVLPRLGLDVAAMQAINPRLVIVTMPAFGLTGRWSAARAYGSTLEQASGLPSVTGRDGDPPTM
QHAALGDPVGGLNAAAALMLGLTYQQRTGDGQHIDLSQVECMLPMLASSIIEQSVTGHTGPRLGNRHPRFVPSGCFPCAG
EDQWVTLVVQSDAQWAALCRVMHRPDLAHDPALATADGRRADEDRIEVAVRHWTSTVRPELAMVTLQEAAIAAGVARLPV
DLVGDAHLLATGHWQPVVRPFMGPHLLPSVSYREGFAERPYPIERLAPTLGQHNHEVLREIGLTEAEIGDLHDRGVIGRV
ATAKKSGGARQAAE

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=415, Percent_Identity=27.2289156626506, Blast_Score=142, Evalue=9e-34,
Organism=Homo sapiens, GI300863124, Length=440, Percent_Identity=27.2727272727273, Blast_Score=137, Evalue=5e-32,
Organism=Homo sapiens, GI300863126, Length=391, Percent_Identity=23.7851662404092, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI13376042, Length=440, Percent_Identity=24.7727272727273, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI266456254, Length=414, Percent_Identity=23.4299516908213, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI42794625, Length=207, Percent_Identity=29.4685990338164, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI266458397, Length=207, Percent_Identity=28.9855072463768, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI266458393, Length=207, Percent_Identity=29.4685990338164, Blast_Score=78, Evalue=4e-14,
Organism=Escherichia coli, GI1788717, Length=431, Percent_Identity=25.5220417633411, Blast_Score=139, Evalue=6e-34,
Organism=Escherichia coli, GI87082093, Length=316, Percent_Identity=25.6329113924051, Blast_Score=138, Evalue=2e-33,
Organism=Escherichia coli, GI1786222, Length=416, Percent_Identity=24.2788461538462, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24648431, Length=412, Percent_Identity=27.9126213592233, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24585488, Length=207, Percent_Identity=26.5700483091787, Blast_Score=75, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 87494; Mature: 87494

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALPLSELRVVELGSGDALAYCGKLFADFGAEVVKVEPPGGDPDRQVAPRVERGGGRES
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCCCC
ASFAWLNSNKRSVTAKLDDPAGVVRIERLLADADLLLDARHPVEIEASTLSHRRLRETQP
CEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHCCC
GLAITALSWFGEHGPYRDYLATDAVCRSLAGLVKLVGPAEGPPVLPRDGQTAVIAGLTAF
CEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
IPTLAGLFARADQGARRFAVNAFEATLQIAEFDIALALEAGSTRPRIGLNRFGRGFPVGN
HHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCHHHCCCCCCCCC
YATKDGWLGVTVVTPAQWLGFCAMIGLPELGPDPRYSATNDRFIHADELNSIIRPVLMHR
CCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
TAMDWFERGLALRLPLALVPDMAQLLAQPVMRERGAFATVEIGTASFEAPVLPQRLTASP
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCC
GKPNGRAPLCGEHDGVELSPHRRIADRAAGASEALPLSGIRIVDLTMGWAGPSAVRQLGD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
LGADIVKVESCQYPDWFRGTDPRGPYHPERTYEKTYWFQTMNRNKRGITLDLTTADGRAA
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHH
LTKLLAGADAVIDNYAADVLPRLGLDVAAMQAINPRLVIVTMPAFGLTGRWSAARAYGST
HHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHH
LEQASGLPSVTGRDGDPPTMQHAALGDPVGGLNAAAALMLGLTYQQRTGDGQHIDLSQVE
HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCHHHHCCCCCCEEEHHHHH
CMLPMLASSIIEQSVTGHTGPRLGNRHPRFVPSGCFPCAGEDQWVTLVVQSDAQWAALCR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
VMHRPDLAHDPALATADGRRADEDRIEVAVRHWTSTVRPELAMVTLQEAAIAAGVARLPV
HHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHCCH
DLVGDAHLLATGHWQPVVRPFMGPHLLPSVSYREGFAERPYPIERLAPTLGQHNHEVLRE
HHCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH
IGLTEAEIGDLHDRGVIGRVATAKKSGGARQAAE
HCCCHHHHCCCCCCCCEEHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQALPLSELRVVELGSGDALAYCGKLFADFGAEVVKVEPPGGDPDRQVAPRVERGGGRES
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCCCC
ASFAWLNSNKRSVTAKLDDPAGVVRIERLLADADLLLDARHPVEIEASTLSHRRLRETQP
CEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHCCC
GLAITALSWFGEHGPYRDYLATDAVCRSLAGLVKLVGPAEGPPVLPRDGQTAVIAGLTAF
CEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
IPTLAGLFARADQGARRFAVNAFEATLQIAEFDIALALEAGSTRPRIGLNRFGRGFPVGN
HHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCHHHCCCCCCCCC
YATKDGWLGVTVVTPAQWLGFCAMIGLPELGPDPRYSATNDRFIHADELNSIIRPVLMHR
CCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
TAMDWFERGLALRLPLALVPDMAQLLAQPVMRERGAFATVEIGTASFEAPVLPQRLTASP
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCC
GKPNGRAPLCGEHDGVELSPHRRIADRAAGASEALPLSGIRIVDLTMGWAGPSAVRQLGD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
LGADIVKVESCQYPDWFRGTDPRGPYHPERTYEKTYWFQTMNRNKRGITLDLTTADGRAA
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHH
LTKLLAGADAVIDNYAADVLPRLGLDVAAMQAINPRLVIVTMPAFGLTGRWSAARAYGST
HHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHH
LEQASGLPSVTGRDGDPPTMQHAALGDPVGGLNAAAALMLGLTYQQRTGDGQHIDLSQVE
HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCHHHHCCCCCCEEEHHHHH
CMLPMLASSIIEQSVTGHTGPRLGNRHPRFVPSGCFPCAGEDQWVTLVVQSDAQWAALCR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
VMHRPDLAHDPALATADGRRADEDRIEVAVRHWTSTVRPELAMVTLQEAAIAAGVARLPV
HHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHCCH
DLVGDAHLLATGHWQPVVRPFMGPHLLPSVSYREGFAERPYPIERLAPTLGQHNHEVLRE
HHCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH
IGLTEAEIGDLHDRGVIGRVATAKKSGGARQAAE
HCCCHHHHCCCCCCCCEEHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA