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The map label for this gene is yjjA [H]

Identifier: 86748701

GI number: 86748701

Start: 1776086

End: 1776931

Strand: Reverse

Name: yjjA [H]

Synonym: RPB_1576

Alternate gene names: 86748701

Gene position: 1776931-1776086 (Counterclockwise)

Preceding gene: 86748703

Following gene: 86748700

Centisome position: 33.33

GC content: 70.57

Gene sequence:

>846_bases
ATGGCTGGACGGCTCGACGGCACCCGCATCCTGATTCTGGAGACGCGCGAGGAAGCGCAGTTCTCCCGCCTGCTCGCCGA
TCAGGGCGCCGAGGTGCTGCAATGTCCGATGGTGGCGATCGTCGACGCCCCGGACCCCGCCCCGGTCGCGGCCTGGATCG
ACAGGCTGATCGCGGCCCCGTTCGACGATCTGGTGCTGACCACCGGCGAAGGCCTGCGCCGGCTCACCAGGCTGGCGCGC
AGCCTCGATCGCGAGCGCGACTTCGTCGACGCGATCGGCAAGACGCGCCGGTTCGCGCGTGGCCCCAAGCCCGGCCGCGC
ACTGCGCGAGATCGGGCTCGACGCCGACGTCACCACCGAGACGCCGACCTCCGAGGGCATCGCCGCGACGCTGGCGAAGT
CCGATTTGCGCGATCACCGCGTCGGCCTGCAGCTCTATCCCGACAAGGATCACGCCGCGCTGATCGGCGCGGTCGAGGCG
CAGGGAGCGGTCGTCGATGCCGTGCTGCCCTACGCCTACGACGCCCGCGCCGCGGAAGAGAACGTCGTCACCGCGATCGA
GGAAATGGCGCAGGGCCGCGTCGACGCGATCGCGCTGACCAGTTCCAACCAGCTCCGCCGACTGTTCGATGTCGCGACGG
CGCGCGGCTACGAGGCGCGCCTGCGCGAGGGCCTCGACGCGACGCCGATCGCGTCGGTCGGCCCGGTGGTGTCGGACGAA
TTGCGGCACTATGGCCTCACGCCGGCGATCACGCCGCCGGAGGGCGCGTTCTTCATGAAGCCGCTGATCAGCGCGATGAT
CACCTCGCTGAACCGCCGAGCGTCGCGCACTGCACCATCATCGTGA

Upstream 100 bases:

>100_bases
CGCTCGGTTCGGGCCCCTGCTCTAGCATCGGCGCGAGGCTTGCGCCAATCCCGATCAAAGGCGCAAGATGATCAAACAAA
CGGCGATCGGCGGAGTTTTC

Downstream 100 bases:

>100_bases
CTTGACGGTTTCGTTCGCGCCGCCAAGATGCGGGCAACGAAAAACAAGGTCGGGTGGACATGCAGGCGCTGCCGCTGTCG
GAATTGCGCGTCGTGGAATT

Product: uroporphyrinogen III synthase HEM4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAGRLDGTRILILETREEAQFSRLLADQGAEVLQCPMVAIVDAPDPAPVAAWIDRLIAAPFDDLVLTTGEGLRRLTRLAR
SLDRERDFVDAIGKTRRFARGPKPGRALREIGLDADVTTETPTSEGIAATLAKSDLRDHRVGLQLYPDKDHAALIGAVEA
QGAVVDAVLPYAYDARAAEENVVTAIEEMAQGRVDAIALTSSNQLRRLFDVATARGYEARLREGLDATPIASVGPVVSDE
LRHYGLTPAITPPEGAFFMKPLISAMITSLNRRASRTAPSS

Sequences:

>Translated_281_residues
MAGRLDGTRILILETREEAQFSRLLADQGAEVLQCPMVAIVDAPDPAPVAAWIDRLIAAPFDDLVLTTGEGLRRLTRLAR
SLDRERDFVDAIGKTRRFARGPKPGRALREIGLDADVTTETPTSEGIAATLAKSDLRDHRVGLQLYPDKDHAALIGAVEA
QGAVVDAVLPYAYDARAAEENVVTAIEEMAQGRVDAIALTSSNQLRRLFDVATARGYEARLREGLDATPIASVGPVVSDE
LRHYGLTPAITPPEGAFFMKPLISAMITSLNRRASRTAPSS
>Mature_280_residues
AGRLDGTRILILETREEAQFSRLLADQGAEVLQCPMVAIVDAPDPAPVAAWIDRLIAAPFDDLVLTTGEGLRRLTRLARS
LDRERDFVDAIGKTRRFARGPKPGRALREIGLDADVTTETPTSEGIAATLAKSDLRDHRVGLQLYPDKDHAALIGAVEAQ
GAVVDAVLPYAYDARAAEENVVTAIEEMAQGRVDAIALTSSNQLRRLFDVATARGYEARLREGLDATPIASVGPVVSDEL
RHYGLTPAITPPEGAFFMKPLISAMITSLNRRASRTAPSS

Specific function: Unknown

COG id: COG1587

COG function: function code H; Uroporphyrinogen-III synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003754 [H]

Pfam domain/function: PF02602 HEM4 [H]

EC number: NA

Molecular weight: Translated: 30307; Mature: 30176

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRLDGTRILILETREEAQFSRLLADQGAEVLQCPMVAIVDAPDPAPVAAWIDRLIAAP
CCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHCC
FDDLVLTTGEGLRRLTRLARSLDRERDFVDAIGKTRRFARGPKPGRALREIGLDADVTTE
CHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
TPTSEGIAATLAKSDLRDHRVGLQLYPDKDHAALIGAVEAQGAVVDAVLPYAYDARAAEE
CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEHHCCCCHHHHHHHHHHCCHHHHH
NVVTAIEEMAQGRVDAIALTSSNQLRRLFDVATARGYEARLREGLDATPIASVGPVVSDE
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHH
LRHYGLTPAITPPEGAFFMKPLISAMITSLNRRASRTAPSS
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGRLDGTRILILETREEAQFSRLLADQGAEVLQCPMVAIVDAPDPAPVAAWIDRLIAAP
CCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHCC
FDDLVLTTGEGLRRLTRLARSLDRERDFVDAIGKTRRFARGPKPGRALREIGLDADVTTE
CHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
TPTSEGIAATLAKSDLRDHRVGLQLYPDKDHAALIGAVEAQGAVVDAVLPYAYDARAAEE
CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEHHCCCCHHHHHHHHHHCCHHHHH
NVVTAIEEMAQGRVDAIALTSSNQLRRLFDVATARGYEARLREGLDATPIASVGPVVSDE
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHH
LRHYGLTPAITPPEGAFFMKPLISAMITSLNRRASRTAPSS
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]