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The map label for this gene is pcaC [H]

Identifier: 86748693

GI number: 86748693

Start: 1767329

End: 1767658

Strand: Reverse

Name: pcaC [H]

Synonym: RPB_1568

Alternate gene names: 86748693

Gene position: 1767658-1767329 (Counterclockwise)

Preceding gene: 86748694

Following gene: 86748692

Centisome position: 33.15

GC content: 67.58

Gene sequence:

>330_bases
GTGATCGATTCGCTGGCCGAGATCGCGCCGGATTTCGCCCGCTATGTGATCGAGTTTCCGTTCGGCGACATCTACAGCCG
CCCCGGCCTCGACCTGCGCGCCCGCGAGATCGCGACCATCGCCGCCCTGACCGCGATGGGCAACGCCACGCCGCAGCTCA
AGGTCCATATCGAGGCCGGGCTGAATGTCGGCCTCAGCCGCGCCGAGATCATCGAGATCATCATGCAGATGGCGGTCTAT
GCCGGATTCCCGGCGGCGCTGAACGGCCTGTTCGCAGCCAGGGACGTGTTCGCCGCGCGCACGGCATCCGGTCAGGCGCC
CGCGGCATGA

Upstream 100 bases:

>100_bases
GTGGAGACGGACGATGACGCAACTCACAACCGACCAGCACGAAAGGTACGCGCGCGGGCTGCGCGCGCTCGCGGCGATTG
ACGGCGACGCCGGCCACAAG

Downstream 100 bases:

>100_bases
CAAGCGTTTTCGCCTTCCGGGATCGTCGACCGACGACCGGAAGGCGCGCGCCGCGCGTGCCCAGCGCGTCGTAGACGCCG
ACAGCGGCCGACGCTCCGGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MIDSLAEIAPDFARYVIEFPFGDIYSRPGLDLRAREIATIAALTAMGNATPQLKVHIEAGLNVGLSRAEIIEIIMQMAVY
AGFPAALNGLFAARDVFAARTASGQAPAA

Sequences:

>Translated_109_residues
MIDSLAEIAPDFARYVIEFPFGDIYSRPGLDLRAREIATIAALTAMGNATPQLKVHIEAGLNVGLSRAEIIEIIMQMAVY
AGFPAALNGLFAARDVFAARTASGQAPAA
>Mature_109_residues
MIDSLAEIAPDFARYVIEFPFGDIYSRPGLDLRAREIATIAALTAMGNATPQLKVHIEAGLNVGLSRAEIIEIIMQMAVY
AGFPAALNGLFAARDVFAARTASGQAPAA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 11536; Mature: 11536

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSLAEIAPDFARYVIEFPFGDIYSRPGLDLRAREIATIAALTAMGNATPQLKVHIEAG
CCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
LNVGLSRAEIIEIIMQMAVYAGFPAALNGLFAARDVFAARTASGQAPAA
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIDSLAEIAPDFARYVIEFPFGDIYSRPGLDLRAREIATIAALTAMGNATPQLKVHIEAG
CCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
LNVGLSRAEIIEIIMQMAVYAGFPAALNGLFAARDVFAARTASGQAPAA
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]