| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is wcaE [C]
Identifier: 86748668
GI number: 86748668
Start: 1739152
End: 1739895
Strand: Direct
Name: wcaE [C]
Synonym: RPB_1543
Alternate gene names: 86748668
Gene position: 1739152-1739895 (Clockwise)
Preceding gene: 86748666
Following gene: 86748669
Centisome position: 32.62
GC content: 58.87
Gene sequence:
>744_bases ATGCGCGATCCTGGTCAAGCGCCTAGCCTTTCGATCGTGACGGTGACGTACAACAGCGCGGCCACCCTGTCCGACACTCT GAACAGTGTTCGCAGCCAGACCTTCCGAGACTTCGAGCATATCGTCGTCGATGGCGGATCGACGGACGGGACGCTCGACA TTCTGAACGCCGCGGGCTCTTCGGTGCGCTGGATTTCCGAACCCGACAAGGGCATCTACGATGCGATGAACAAGGGCATC GGGATGGCGCGTGGCCGCTGGATTCATCTGCTCAATTCGGACGATTACTACGCGTCGGACGATGTGCTGGCCCGCATCGT TCCGAAGCTGAAAGAGGATGCAGTCAACTATTGTGACCTCATTCGGGCCGACGCAAATGGTGGACGAGTCGTCCAGCGCT TCCCGTTCCGAAAATGGCCGCTGTATTTTTCGGCTTACTTGCCGCATCCGTCTCTCGTCGTCTCGGCGGCTCAGTACGGG GCGGTCGGAACTTACGACGTCGGCTTCCGGGTCGCCGCCGACCACGATATGATTTTGCGACTGGTCGACCGCTTTCCTGC CAACCATATCCCGGTCGAAATGACCGTGATGCGTCAGGACGGAGTGTCGGCGACCAATCTGGATCTGAGCATGCGGGAGT TCGGGATGGTGTTGCAGAAGCACCGGCTTCCCGAACCGCTGATCACGGCCATCATGGCGATCCGACGGATTTGGTGGAGG TTGAGATCCAATGAACGATCCTAA
Upstream 100 bases:
>100_bases AGGCCCGCGACCGAAGCATATCGGATGTTGCTGCTGCCCGACAGAACGAGTATAGCGCTGCAAGGGAATTTGGGCCAAGC AGTGGACACGAAAAGAATCG
Downstream 100 bases:
>100_bases CAGCTTGGCAATTCGCGATGGTGTCAGCAAGAGGATCGTCGATCTCTTCCCCGACAAGCATGCCCGCATCGCCGATCTCG GTTGTGGCGAAGGTGAGTTA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGSSVRWISEPDKGIYDAMNKGI GMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDLIRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYG AVGTYDVGFRVAADHDMILRLVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR LRSNERS
Sequences:
>Translated_247_residues MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGSSVRWISEPDKGIYDAMNKGI GMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDLIRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYG AVGTYDVGFRVAADHDMILRLVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR LRSNERS >Mature_247_residues MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGSSVRWISEPDKGIYDAMNKGI GMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDLIRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYG AVGTYDVGFRVAADHDMILRLVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR LRSNERS
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788368, Length=205, Percent_Identity=31.7073170731707, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 27702; Mature: 27702
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGS CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCC SVRWISEPDKGIYDAMNKGIGMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDL CEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH IRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYGAVGTYDVGFRVAADHDMILR EEECCCCCEEEEECCCCCCCEEEEEECCCHHHEEEHHHHCCCEEECCCEEEECCHHHHHH LVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR HHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LRSNERS HHCCCCC >Mature Secondary Structure MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGS CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCC SVRWISEPDKGIYDAMNKGIGMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDL CEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH IRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYGAVGTYDVGFRVAADHDMILR EEECCCCCEEEEECCCCCCCEEEEEECCCHHHEEEHHHHCCCEEECCCEEEECCHHHHHH LVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR HHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LRSNERS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]