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The map label for this gene is dadA

Identifier: 86748628

GI number: 86748628

Start: 1698023

End: 1699300

Strand: Direct

Name: dadA

Synonym: RPB_1503

Alternate gene names: 86748628

Gene position: 1698023-1699300 (Clockwise)

Preceding gene: 86748627

Following gene: 86748630

Centisome position: 31.85

GC content: 66.12

Gene sequence:

>1278_bases
ATGAAAGTTCTGGTGATGGGAGCCGGCGTGATCGGCGTCACGACGGCTTATTATCTGGCCAAGGCCGGCTTCGAGGTCAC
CGTGATCGACCGTCAGCCCGGCCCCGGCCTCGAGACGAGCTTCGCCAATGCGGGCGAAGTCTCGCCCGGATATTCTTCGC
CATGGGCCGGCCCGGGCGTGCCGCGCAAGGCGATTCAATGGATTCTCGATCGCCACGGACCGCTGGTGGTGCGGCCGCAG
ATCGACCCGGCGATGTGGCGCTGGGTTGTCCAGATGCTGCGCAACTGCACCGCCAGCCGCTACGCGCTCAACAAGTCGCG
GATGGTCGGCATCGCCGAATACAGCCGGGACTGTCTGCGCGCTCTGCGCGCTGATATCGGCATTACCTACGACGAGCGCA
GCCAGGGCACGCTGCAGCTGTTTCGCAAGCAGTCGCAGCTCGATGCGATCGGCGGAGACGTCGAGATCCTGCGTCAGTAC
AATGTCCCGTTCGAAGTTTTGGATCGGGCCGGCTGCATTCGCGCGGAGCCCGGACTGGCCGCGGTGCAGAATTCGTTCGT
CGGCGGCCTGCGACTGGTCGATGACGAGACCGGCGATTGTCATCTGTTCACGCAGCGGCTGGAGGCGGCCGCGGCCGCGC
TGGGTGTGAATTTCGTCTACGAAACGACGATCCGGAGTATCGATGCGCAGGGCGGCGCGGTCGCCGGGGTGACGACCGAC
AAGGGCAGGTTCGTCGCCGACCGCTATGTGATGGCGCTCGGCAGTTTTTCGCCGTTGCTGCTGCGGCCGCTCGGCATCGA
TATTCCGGTCTATCCGGTCAAGGGCTATTCGATCACCGTTCCGATCGTCGACGAACCGGCGTCGCCGCGATCCACCGTAA
TGGATGAGAGCTACAAGGTCGCGATCACCCGGCTCGGCGATCGCATCCGCGTCGGCGGGACGGCGGAAATCGGCGACTAC
CAGCCGCGCCTGCGGCCGAACCGCCGAGTGACGCTGGATCGGTCATTGACCGATCTGTTTCCCGGCGCAGGTGACCTGTC
GCAGGCGACGTTCTGGAGCGGATTGCGGCCCATGACGCCGGACGGGCCGCCGATCATCGGGCCGACCCGCCTCGCAAACC
TGCATCTGAACACCGGGCATGGCACGCTGGGCTGGACCATGGCCTGCGGCGCGGCGCGCGTCGCGGTGGATCAGCTTCGG
AGCGTCGAGCCCGAGATCGACGCGCGGGCGCTGTCGCTCAGCCGCTACCAATCGGGAGCGGCATCACTTGGCGCATGA

Upstream 100 bases:

>100_bases
GCCTCGGCGATCGCTTTCGACGGATTTATCGCGATGCCGCCGACCGGCCGCAGGACAGTGACCTCCAAAAAAGAGACGAT
GCCATGAAAGCGCTGATGCC

Downstream 100 bases:

>100_bases
GCCTCGAAAGGCATGATGCGGAAACAAGTAGCTGGAGCAGCGTGACGGCTTCGAAGCCGTTGTCCTGCTCCAGCAGCACC
CGCGAAGCGGATGATCGGAT

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKVLVMGAGVIGVTTAYYLAKAGFEVTVIDRQPGPGLETSFANAGEVSPGYSSPWAGPGVPRKAIQWILDRHGPLVVRPQ
IDPAMWRWVVQMLRNCTASRYALNKSRMVGIAEYSRDCLRALRADIGITYDERSQGTLQLFRKQSQLDAIGGDVEILRQY
NVPFEVLDRAGCIRAEPGLAAVQNSFVGGLRLVDDETGDCHLFTQRLEAAAAALGVNFVYETTIRSIDAQGGAVAGVTTD
KGRFVADRYVMALGSFSPLLLRPLGIDIPVYPVKGYSITVPIVDEPASPRSTVMDESYKVAITRLGDRIRVGGTAEIGDY
QPRLRPNRRVTLDRSLTDLFPGAGDLSQATFWSGLRPMTPDGPPIIGPTRLANLHLNTGHGTLGWTMACGAARVAVDQLR
SVEPEIDARALSLSRYQSGAASLGA

Sequences:

>Translated_425_residues
MKVLVMGAGVIGVTTAYYLAKAGFEVTVIDRQPGPGLETSFANAGEVSPGYSSPWAGPGVPRKAIQWILDRHGPLVVRPQ
IDPAMWRWVVQMLRNCTASRYALNKSRMVGIAEYSRDCLRALRADIGITYDERSQGTLQLFRKQSQLDAIGGDVEILRQY
NVPFEVLDRAGCIRAEPGLAAVQNSFVGGLRLVDDETGDCHLFTQRLEAAAAALGVNFVYETTIRSIDAQGGAVAGVTTD
KGRFVADRYVMALGSFSPLLLRPLGIDIPVYPVKGYSITVPIVDEPASPRSTVMDESYKVAITRLGDRIRVGGTAEIGDY
QPRLRPNRRVTLDRSLTDLFPGAGDLSQATFWSGLRPMTPDGPPIIGPTRLANLHLNTGHGTLGWTMACGAARVAVDQLR
SVEPEIDARALSLSRYQSGAASLGA
>Mature_425_residues
MKVLVMGAGVIGVTTAYYLAKAGFEVTVIDRQPGPGLETSFANAGEVSPGYSSPWAGPGVPRKAIQWILDRHGPLVVRPQ
IDPAMWRWVVQMLRNCTASRYALNKSRMVGIAEYSRDCLRALRADIGITYDERSQGTLQLFRKQSQLDAIGGDVEILRQY
NVPFEVLDRAGCIRAEPGLAAVQNSFVGGLRLVDDETGDCHLFTQRLEAAAAALGVNFVYETTIRSIDAQGGAVAGVTTD
KGRFVADRYVMALGSFSPLLLRPLGIDIPVYPVKGYSITVPIVDEPASPRSTVMDESYKVAITRLGDRIRVGGTAEIGDY
QPRLRPNRRVTLDRSLTDLFPGAGDLSQATFWSGLRPMTPDGPPIIGPTRLANLHLNTGHGTLGWTMACGAARVAVDQLR
SVEPEIDARALSLSRYQSGAASLGA

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=419, Percent_Identity=51.7899761336515, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_RHOP2 (Q2IZZ7)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_485124.1
- ProteinModelPortal:   Q2IZZ7
- STRING:   Q2IZZ7
- GeneID:   3908416
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_1503
- eggNOG:   COG0665
- HOGENOM:   HBG729204
- OMA:   WQMLQNC
- ProtClustDB:   PRK00711
- BioCyc:   RPAL316058:RPB_1503-MONOMER
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 45886; Mature: 45886

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVMGAGVIGVTTAYYLAKAGFEVTVIDRQPGPGLETSFANAGEVSPGYSSPWAGPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRKAIQWILDRHGPLVVRPQIDPAMWRWVVQMLRNCTASRYALNKSRMVGIAEYSRDCLR
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHCCCHHHEEEHHHHHHHHHH
ALRADIGITYDERSQGTLQLFRKQSQLDAIGGDVEILRQYNVPFEVLDRAGCIRAEPGLA
HHHHHHCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCEECCCCHH
AVQNSFVGGLRLVDDETGDCHLFTQRLEAAAAALGVNFVYETTIRSIDAQGGAVAGVTTD
HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCEEEEEECC
KGRFVADRYVMALGSFSPLLLRPLGIDIPVYPVKGYSITVPIVDEPASPRSTVMDESYKV
CCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCHHHHCCCCCEE
AITRLGDRIRVGGTAEIGDYQPRLRPNRRVTLDRSLTDLFPGAGDLSQATFWSGLRPMTP
EEEECCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCHHHHHCCCCCCCC
DGPPIIGPTRLANLHLNTGHGTLGWTMACGAARVAVDQLRSVEPEIDARALSLSRYQSGA
CCCCCCCCCEEEEEEEECCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
ASLGA
HHCCC
>Mature Secondary Structure
MKVLVMGAGVIGVTTAYYLAKAGFEVTVIDRQPGPGLETSFANAGEVSPGYSSPWAGPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRKAIQWILDRHGPLVVRPQIDPAMWRWVVQMLRNCTASRYALNKSRMVGIAEYSRDCLR
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHCCCHHHEEEHHHHHHHHHH
ALRADIGITYDERSQGTLQLFRKQSQLDAIGGDVEILRQYNVPFEVLDRAGCIRAEPGLA
HHHHHHCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCEECCCCHH
AVQNSFVGGLRLVDDETGDCHLFTQRLEAAAAALGVNFVYETTIRSIDAQGGAVAGVTTD
HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCEEEEEECC
KGRFVADRYVMALGSFSPLLLRPLGIDIPVYPVKGYSITVPIVDEPASPRSTVMDESYKV
CCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCHHHHCCCCCEE
AITRLGDRIRVGGTAEIGDYQPRLRPNRRVTLDRSLTDLFPGAGDLSQATFWSGLRPMTP
EEEECCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCHHHHHCCCCCCCC
DGPPIIGPTRLANLHLNTGHGTLGWTMACGAARVAVDQLRSVEPEIDARALSLSRYQSGA
CCCCCCCCCEEEEEEEECCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
ASLGA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA