| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bisC [C]
Identifier: 86748617
GI number: 86748617
Start: 1683063
End: 1685384
Strand: Reverse
Name: bisC [C]
Synonym: RPB_1492
Alternate gene names: 86748617
Gene position: 1685384-1683063 (Counterclockwise)
Preceding gene: 86748619
Following gene: 86748616
Centisome position: 31.61
GC content: 65.81
Gene sequence:
>2322_bases ATGAATCACCCGAAGACGCTGACGGCGGCCCATTGGGGCCTTTATGAGATCCGCGACGCGATGACGGCCGAGGTTTCGAT CCATCCTTTCGCGACGGATCCGAGCCCGTCGCCGATCGGCTTGCAGATGCTGGAGACGGCGCGGTCCGATTCGCGGGTTC GGCGCCCTGCCGTGCGCAAGGGCTGGCTGGAGAACGGCCCGGCATCCCGCGGCCAACGCGGCCTCGAGCCGTTCGTCGAA GTCGACTGGAGCGTCGCGCTCGACCTCGTGGCCCGCGAACTCGGCCGCGTGAAGCAGCAGCACGGCAATCAAGCGATCTT CGGCGGCTCCTACGGCTGGTCCAGCGCCGGCCGCTTTCATCATGCCCAGAGCCAGGTCCACCGCTTCCTCAACTGCATCG GCGGCTACGTCCGCCACCTCAATTCGTACAGCCTCGGCGTCGCTCACCCATTGCTGCCCTATCTGGTCGCGCCGATCGGC GAGCTGATGATGACGCACAACGACTGGGACTCGCTGATCGAGCACTGCGAATTGTTCGTGACGTTCGGTGGCGTGCCGGC CAAGAACGCCCAGATTTCGCAGGGCGGCACTGCCGAGCATCGTATTCCCGGAGCCCTCGCCCGGATGCAGCGCGCCGGCA TCAAATTCGTGAACATCAGCCCGACCCGGAAAGATCTGGAGACCGGCGCCGACTTCGAATGGTGGCCGATCCGCCCGAAC ACCGACACGGCGCTGATGCTGGCGCTGGCCTACGTGCTGGTCGAGGAGGGTTTGCACGACACCACGTTCCTCGCGACATA CTGCGTCGGCTTCGAGGTTTTCCGGAACTATCTGCTCGGCCAGAAGGACGGCGTGCGCAAGACACCGGACTGGGCCGGAG GCATCACCGGCATCGACCCGGAGCGGATTCGATCGCTGGCCCGGGAGATGGGCGCCAAGCGTTGCATGATCAACGCCGCG TGGTCGTTGCAGCGCGCCCATCACGGCGAGCAGCCGTATTGGGCGCTGATCTCGCTCGCCGCGCTGGTCGGTCAGATCGG CACGCCCGGCGGCGGCTTCGGTGTCGGCTATGGCGCCGAGAATCTATTGGGAAGTCCGCATGCGCGGATCAGCGGGCCCA CCCTGCCCCAGGGCAGCAATGCGGTCGACAGTTTCATTCCGGTCGCGCGCATCGTCGACATGCTCGAGAGCCCGGGGCAG CCTTTCACCTATTCGGGCAAGATCCATCACTATCCCGACGTCAAGCTGGTCTACTGGGCCGGCGGCAATCCGTTTCATCA CCATCAGGACCTGACCCGACTCGTCAACGCCTGGCGGCTGCCCGACTCGGTGTTCGTGAACGAGCAGTTCTGGACTCCGC TGGCGAAGATGGCCGACGTCGTCTTTCCCGCCACCACCGCGCTGGAGCGGGAGGACATCTTCTTCTCGCCCAAGGAGCAC CTGATCGCCCCGATGAAGCAGGCGATTCCCCGCGTCGGAGAAGCCCGCGACGACTACGACATCTTCCGTGGCTTGTCCGA CCGCCTCGGCGTCGACGCGGCGTTTTCCGAACACCGCGATGCGCGGCAATGGATCGAACATCTCTACATCGACTGGCGCG AGCGGATCGCGGGCGACGGCGTGGCACTGCCGGACTTCGAATCCTTCTGGCACGGCGAGACCGTCGCGCTGCCTAAGCCC TCGCGGCCGACCGTGATGCTGGAGGCCTTCCGCGACGATCCGCTGGCCCATCCGCTGGGAACGCCGTCCGGCAAGATCGA GATCTATTCGGCGACGGTCGACGGGTTCGGTTACGCGGATTGCCCGGGCGGACACGCGACGTGGCTCGAACCGGCCGAAT GGCTCGGAAGTCCGCTGGCGACCACCTATCCGCTGCACCTGATATCGGATCAGCCCTCGACGCGGCTTCACAGCCAGCTC GATCATGGCCCGTTGAGCCGATCTCAGAAGATCCAGGGCCGCGAACCGGTCGACATCCATCCCGACGACGCCGACCGGCG GGGCATCCGGACCGGCGACATCGTGCGGCTGTTCAACGCCCGCGGCTCGTGCCTGAGCGGTGCGAACGTGACTGCCAATG TCGTAAGCGGGGTGGTACGCTTGTCGACGGGCGCATGGTTCGACCCACAGGATTGGAGCGGAAACCAGGTGCTGGAGAAG CACGGCAACCCCAACGCGCTCACGGCCGATCTCGCCGCATCATCGTTTTCGCAAGGCTGTGCGGCGCAGACCTGCCTCGT CGACATCGAGAAGTATCTCGACGCGGCACCGCCGGTCTCGGCCTTCGACACGCCGGACGGCGTGGCGAGCCTGGCGACAT GA
Upstream 100 bases:
>100_bases CGGGTTTCCTGCTGGCCTTACCGAAAGGAGGTGCTGGCTTTATGAAACAGCAACATCCGTCCGCATGATAGGGCCACGTA GGTATCTCAGACGGATCCTG
Downstream 100 bases:
>100_bases CGAACTGGCGGGCCGCGCCGCCGGCTTCAACACCTTTCGACCTGAATGAAAGAACACCATGAACGAGACCATCCTCAGCA AAGAACTTCGCGAACTCGAT
Product: trimethylamine-N-oxide reductase (cytochrome c)
Products: Biotin. [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MNHPKTLTAAHWGLYEIRDAMTAEVSIHPFATDPSPSPIGLQMLETARSDSRVRRPAVRKGWLENGPASRGQRGLEPFVE VDWSVALDLVARELGRVKQQHGNQAIFGGSYGWSSAGRFHHAQSQVHRFLNCIGGYVRHLNSYSLGVAHPLLPYLVAPIG ELMMTHNDWDSLIEHCELFVTFGGVPAKNAQISQGGTAEHRIPGALARMQRAGIKFVNISPTRKDLETGADFEWWPIRPN TDTALMLALAYVLVEEGLHDTTFLATYCVGFEVFRNYLLGQKDGVRKTPDWAGGITGIDPERIRSLAREMGAKRCMINAA WSLQRAHHGEQPYWALISLAALVGQIGTPGGGFGVGYGAENLLGSPHARISGPTLPQGSNAVDSFIPVARIVDMLESPGQ PFTYSGKIHHYPDVKLVYWAGGNPFHHHQDLTRLVNAWRLPDSVFVNEQFWTPLAKMADVVFPATTALEREDIFFSPKEH LIAPMKQAIPRVGEARDDYDIFRGLSDRLGVDAAFSEHRDARQWIEHLYIDWRERIAGDGVALPDFESFWHGETVALPKP SRPTVMLEAFRDDPLAHPLGTPSGKIEIYSATVDGFGYADCPGGHATWLEPAEWLGSPLATTYPLHLISDQPSTRLHSQL DHGPLSRSQKIQGREPVDIHPDDADRRGIRTGDIVRLFNARGSCLSGANVTANVVSGVVRLSTGAWFDPQDWSGNQVLEK HGNPNALTADLAASSFSQGCAAQTCLVDIEKYLDAAPPVSAFDTPDGVASLAT
Sequences:
>Translated_773_residues MNHPKTLTAAHWGLYEIRDAMTAEVSIHPFATDPSPSPIGLQMLETARSDSRVRRPAVRKGWLENGPASRGQRGLEPFVE VDWSVALDLVARELGRVKQQHGNQAIFGGSYGWSSAGRFHHAQSQVHRFLNCIGGYVRHLNSYSLGVAHPLLPYLVAPIG ELMMTHNDWDSLIEHCELFVTFGGVPAKNAQISQGGTAEHRIPGALARMQRAGIKFVNISPTRKDLETGADFEWWPIRPN TDTALMLALAYVLVEEGLHDTTFLATYCVGFEVFRNYLLGQKDGVRKTPDWAGGITGIDPERIRSLAREMGAKRCMINAA WSLQRAHHGEQPYWALISLAALVGQIGTPGGGFGVGYGAENLLGSPHARISGPTLPQGSNAVDSFIPVARIVDMLESPGQ PFTYSGKIHHYPDVKLVYWAGGNPFHHHQDLTRLVNAWRLPDSVFVNEQFWTPLAKMADVVFPATTALEREDIFFSPKEH LIAPMKQAIPRVGEARDDYDIFRGLSDRLGVDAAFSEHRDARQWIEHLYIDWRERIAGDGVALPDFESFWHGETVALPKP SRPTVMLEAFRDDPLAHPLGTPSGKIEIYSATVDGFGYADCPGGHATWLEPAEWLGSPLATTYPLHLISDQPSTRLHSQL DHGPLSRSQKIQGREPVDIHPDDADRRGIRTGDIVRLFNARGSCLSGANVTANVVSGVVRLSTGAWFDPQDWSGNQVLEK HGNPNALTADLAASSFSQGCAAQTCLVDIEKYLDAAPPVSAFDTPDGVASLAT >Mature_773_residues MNHPKTLTAAHWGLYEIRDAMTAEVSIHPFATDPSPSPIGLQMLETARSDSRVRRPAVRKGWLENGPASRGQRGLEPFVE VDWSVALDLVARELGRVKQQHGNQAIFGGSYGWSSAGRFHHAQSQVHRFLNCIGGYVRHLNSYSLGVAHPLLPYLVAPIG ELMMTHNDWDSLIEHCELFVTFGGVPAKNAQISQGGTAEHRIPGALARMQRAGIKFVNISPTRKDLETGADFEWWPIRPN TDTALMLALAYVLVEEGLHDTTFLATYCVGFEVFRNYLLGQKDGVRKTPDWAGGITGIDPERIRSLAREMGAKRCMINAA WSLQRAHHGEQPYWALISLAALVGQIGTPGGGFGVGYGAENLLGSPHARISGPTLPQGSNAVDSFIPVARIVDMLESPGQ PFTYSGKIHHYPDVKLVYWAGGNPFHHHQDLTRLVNAWRLPDSVFVNEQFWTPLAKMADVVFPATTALEREDIFFSPKEH LIAPMKQAIPRVGEARDDYDIFRGLSDRLGVDAAFSEHRDARQWIEHLYIDWRERIAGDGVALPDFESFWHGETVALPKP SRPTVMLEAFRDDPLAHPLGTPSGKIEIYSATVDGFGYADCPGGHATWLEPAEWLGSPLATTYPLHLISDQPSTRLHSQL DHGPLSRSQKIQGREPVDIHPDDADRRGIRTGDIVRLFNARGSCLSGANVTANVVSGVVRLSTGAWFDPQDWSGNQVLEK HGNPNALTADLAASSFSQGCAAQTCLVDIEKYLDAAPPVSAFDTPDGVASLAT
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI145693196, Length=776, Percent_Identity=40.979381443299, Blast_Score=554, Evalue=1e-159, Organism=Escherichia coli, GI87081994, Length=784, Percent_Identity=38.5204081632653, Blast_Score=539, Evalue=1e-154, Organism=Escherichia coli, GI1787231, Length=782, Percent_Identity=39.1304347826087, Blast_Score=486, Evalue=1e-138, Organism=Escherichia coli, GI87081797, Length=755, Percent_Identity=32.1854304635762, Blast_Score=289, Evalue=5e-79, Organism=Escherichia coli, GI1787870, Length=735, Percent_Identity=31.5646258503401, Blast_Score=277, Evalue=2e-75, Organism=Escherichia coli, GI171474008, Length=725, Percent_Identity=31.0344827586207, Blast_Score=254, Evalue=2e-68, Organism=Escherichia coli, GI3868721, Length=673, Percent_Identity=22.5854383358098, Blast_Score=112, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 84829; Mature: 84829
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPKTLTAAHWGLYEIRDAMTAEVSIHPFATDPSPSPIGLQMLETARSDSRVRRPAVRK CCCCCCCHHHHCCHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHH GWLENGPASRGQRGLEPFVEVDWSVALDLVARELGRVKQQHGNQAIFGGSYGWSSAGRFH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH HAQSQVHRFLNCIGGYVRHLNSYSLGVAHPLLPYLVAPIGELMMTHNDWDSLIEHCELFV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE TFGGVPAKNAQISQGGTAEHRIPGALARMQRAGIKFVNISPTRKDLETGADFEWWPIRPN EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEECCCCC TDTALMLALAYVLVEEGLHDTTFLATYCVGFEVFRNYLLGQKDGVRKTPDWAGGITGIDP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH ERIRSLAREMGAKRCMINAAWSLQRAHHGEQPYWALISLAALVGQIGTPGGGFGVGYGAE HHHHHHHHHHCHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH NLLGSPHARISGPTLPQGSNAVDSFIPVARIVDMLESPGQPFTYSGKIHHYPDVKLVYWA HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEEEEEC GGNPFHHHQDLTRLVNAWRLPDSVFVNEQFWTPLAKMADVVFPATTALEREDIFFSPKEH CCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCHHHCCCCCCEECCHHH LIAPMKQAIPRVGEARDDYDIFRGLSDRLGVDAAFSEHRDARQWIEHLYIDWRERIAGDG HHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC VALPDFESFWHGETVALPKPSRPTVMLEAFRDDPLAHPLGTPSGKIEIYSATVDGFGYAD CCCCCHHHHCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCC CPGGHATWLEPAEWLGSPLATTYPLHLISDQPSTRLHSQLDHGPLSRSQKIQGREPVDIH CCCCCCCCCCHHHHCCCCCCHHCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC PDDADRRGIRTGDIVRLFNARGSCLSGANVTANVVSGVVRLSTGAWFDPQDWSGNQVLEK CCCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH HGNPNALTADLAASSFSQGCAAQTCLVDIEKYLDAAPPVSAFDTPDGVASLAT CCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MNHPKTLTAAHWGLYEIRDAMTAEVSIHPFATDPSPSPIGLQMLETARSDSRVRRPAVRK CCCCCCCHHHHCCHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHH GWLENGPASRGQRGLEPFVEVDWSVALDLVARELGRVKQQHGNQAIFGGSYGWSSAGRFH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH HAQSQVHRFLNCIGGYVRHLNSYSLGVAHPLLPYLVAPIGELMMTHNDWDSLIEHCELFV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE TFGGVPAKNAQISQGGTAEHRIPGALARMQRAGIKFVNISPTRKDLETGADFEWWPIRPN EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEECCCCC TDTALMLALAYVLVEEGLHDTTFLATYCVGFEVFRNYLLGQKDGVRKTPDWAGGITGIDP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH ERIRSLAREMGAKRCMINAAWSLQRAHHGEQPYWALISLAALVGQIGTPGGGFGVGYGAE HHHHHHHHHHCHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH NLLGSPHARISGPTLPQGSNAVDSFIPVARIVDMLESPGQPFTYSGKIHHYPDVKLVYWA HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEEEEEC GGNPFHHHQDLTRLVNAWRLPDSVFVNEQFWTPLAKMADVVFPATTALEREDIFFSPKEH CCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCHHHCCCCCCEECCHHH LIAPMKQAIPRVGEARDDYDIFRGLSDRLGVDAAFSEHRDARQWIEHLYIDWRERIAGDG HHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC VALPDFESFWHGETVALPKPSRPTVMLEAFRDDPLAHPLGTPSGKIEIYSATVDGFGYAD CCCCCHHHHCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCC CPGGHATWLEPAEWLGSPLATTYPLHLISDQPSTRLHSQLDHGPLSRSQKIQGREPVDIH CCCCCCCCCCHHHHCCCCCCHHCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC PDDADRRGIRTGDIVRLFNARGSCLSGANVTANVVSGVVRLSTGAWFDPQDWSGNQVLEK CCCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH HGNPNALTADLAASSFSQGCAAQTCLVDIEKYLDAAPPVSAFDTPDGVASLAT CCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]